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Sed0002262 (gene) of Chayote v1 genome

Gene IDSed0002262
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6
Genome locationLG04:39077332..39079917
RNA-Seq ExpressionSed0002262
SyntenySed0002262
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR016488 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446979.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucumis melo]6.7e-6390.91Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP+IMDIYNLDDV  VSQLRS++ASEIRKNSH++DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVGREGLVQD G KDQGMSNFLKNFY+SNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

XP_022139255.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Momordica charantia]4.4e-6290.91Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP+IMDIYNLDDV  +SQLRSSVAS+IRKNSHI+DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVG EGLVQDLGTKDQG+SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

XP_022957489.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita moschata]9.7e-6288.64Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP+IM+IYNLDDV   SQ+RS++ASEIRKNSH++DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQG+SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

XP_023552714.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Cucurbita pepo subsp. pepo]1.1e-6289.39Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP+IMDIYNLDDV  +SQ+RS++ASEIRKNSH++DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQG+SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

XP_038892169.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 [Benincasa hispida]3.0e-6391.67Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP+IMDIYNLDDV  VSQLRS++ASEIRKNSH++DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVGREGLVQDLG KDQG+SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

TrEMBL top hitse value%identityAlignment
A0A0A0KRV0 Uncharacterized protein6.2e-6289.39Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEAR+RVFDFFRSACRSLP+IMDIYNLDDV  VSQLRS++ASEIRKNSH++DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YV+GREGLVQD G KDQG SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

A0A1S3BH79 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 63.3e-6390.91Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP+IMDIYNLDDV  VSQLRS++ASEIRKNSH++DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVGREGLVQD G KDQGMSNFLKNFY+SNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

A0A6J1CBT6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.1e-6290.91Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFT R LKVPPNSASLEEARNRVFDFFRSACRSLP+IMDIYNLDDV  +SQLRSSVAS+IRKNSHI+DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVG EGLVQDLGTKDQG+SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

A0A6J1H232 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 64.7e-6288.64Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP+IM+IYNLDDV   SQ+RS++ASEIRKNSH++DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQG+SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

A0A6J1JDJ2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 68.0e-6287.88Show/hide
Query:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ
        MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLP+IM+IYNLDDV  +S +RS++ASEIRKNSH++DPKVIDML+ KGMEELGNITEHAKQRHHIIGQ
Subjt:  MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQ

Query:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        YVVGREGLVQD+G+KDQG+SNFLKNFYKSNYF
Subjt:  YVVGREGLVQDLGTKDQGMSNFLKNFYKSNYF

SwissProt top hitse value%identityAlignment
P56556 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 69.9e-0935.23Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P+ +  + LD  + V   R  V     KN+H++DP+V+D+L+IKG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHII

Q02366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 61.4e-1037.5Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P+ + ++ LD  ++V Q R  V    +KN+HI+DP+V+D+L+IKG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHII

Q0MQA4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 69.9e-0935.23Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHII
        P  S  + EA+ RV + +R+  R +P+ +  + LD  + V   R  V     KN+H++DP+V+D+L+IKG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHII

Q9CQZ5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 69.0e-1037.5Show/hide
Query:  PPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHII
        P  S  L EA+ RV + +R+  R +P+ + +  LD  + V Q R  V     KN+H++DP+V+D+L+IKG  EL    +  KQR H++
Subjt:  PPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHII

Q9LHI0 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 62.6e-4972.31Show/hide
Query:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P+IMDIYNL DVVA SQLR +++++IR N+HI+DPKVID+LI KGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        VG EGLVQ+ G KDQG ++FLKNFY SNYF
Subjt:  VGREGLVQDLGTKDQGMSNFLKNFYKSNYF

Arabidopsis top hitse value%identityAlignment
AT3G12260.1 LYR family of Fe/S cluster biogenesis protein1.8e-5072.31Show/hide
Query:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQYV
        F +R + VPPNSA+L EAR RVFDFFR+ACRS+P+IMDIYNL DVVA SQLR +++++IR N+HI+DPKVID+LI KGMEEL +I +HAKQRHHIIGQYV
Subjt:  FTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQYV

Query:  VGREGLVQDLGTKDQGMSNFLKNFYKSNYF
        VG EGLVQ+ G KDQG ++FLKNFY SNYF
Subjt:  VGREGLVQDLGTKDQGMSNFLKNFYKSNYF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCACAGTTCGAGGTTTGAAGGTTCCGCCGAACTCCGCGTCTCTTGAGGAGGCCAGGAATCGGGTCTTCGATTTCTTCAGATCAGCCTGCCGATCATTGCCGTC
GATCATGGACATTTACAACTTAGACGACGTCGTTGCAGTGTCCCAGCTCCGCTCTTCCGTCGCCTCCGAGATCCGCAAGAATTCCCACATCTCCGATCCCAAGGTGATTG
ATATGCTTATTATCAAGGGAATGGAAGAGCTCGGAAATATTACCGAACATGCGAAGCAGCGGCATCACATCATTGGTCAGTACGTGGTCGGTCGCGAAGGACTTGTGCAA
GATTTGGGCACCAAGGATCAGGGCATGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGCGTATAATACTTAAATCGGGGGGAGAAATTGAGAGAGGAAAACGAGTTTGAGTCATTGAGTCAGTGGGCGAATTGGAGAGATGGCGTTCACAGTTCGAGGTTTGA
AGGTTCCGCCGAACTCCGCGTCTCTTGAGGAGGCCAGGAATCGGGTCTTCGATTTCTTCAGATCAGCCTGCCGATCATTGCCGTCGATCATGGACATTTACAACTTAGAC
GACGTCGTTGCAGTGTCCCAGCTCCGCTCTTCCGTCGCCTCCGAGATCCGCAAGAATTCCCACATCTCCGATCCCAAGGTGATTGATATGCTTATTATCAAGGGAATGGA
AGAGCTCGGAAATATTACCGAACATGCGAAGCAGCGGCATCACATCATTGGTCAGTACGTGGTCGGTCGCGAAGGACTTGTGCAAGATTTGGGCACCAAGGATCAGGGCA
TGTCCAATTTTCTCAAGAACTTCTACAAGAGTAACTACTTCTAAACTTTCACTGTTCTTTGAATATGAGACATGCATGGTTTTATTTTGCGATCTTGAGAAATAATGAAG
AAACTATATCTATCTTCTGGACAAATGATACTATGATCATTTTGTTGGATTGAAATGTTGATACCTTATGATCTGCTCTAATCTTTTAATTAGCAAAGTAATCCAAGATC
TTTGGTTCTATTTGCTTAATTCTTATCCAAAAAGCCTGATTGATTGTC
Protein sequenceShow/hide protein sequence
MAFTVRGLKVPPNSASLEEARNRVFDFFRSACRSLPSIMDIYNLDDVVAVSQLRSSVASEIRKNSHISDPKVIDMLIIKGMEELGNITEHAKQRHHIIGQYVVGREGLVQ
DLGTKDQGMSNFLKNFYKSNYF