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Sed0002274 (gene) of Chayote v1 genome

Gene IDSed0002274
OrganismSechium edule (Chayote v1)
Description(thale cress) hypothetical protein
Genome locationLG09:33883253..33883918
RNA-Seq ExpressionSed0002274
SyntenySed0002274
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042638.1 uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa]3.0e-1257.14Show/hide
Query:  MNSMFSLFDAFAAEQILG-KFFTASSSVPP-----PSNHAAAAAV------SLKDEAKPKSTKGLPRFALEFDGINCFETIVPN
        MNSMFSLFDAFAAE +LG  F  ASSS+P       +N+AA++AV        K+E KPK++   PRFALE DG+NCFET+VPN
Subjt:  MNSMFSLFDAFAAEQILG-KFFTASSSVPP-----PSNHAAAAAV------SLKDEAKPKSTKGLPRFALEFDGINCFETIVPN

KAG6579594.1 hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia]7.3e-1154.65Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAVSL--------KDE----AKPKSTKGLPRFALEFDGINCFETIVPN
        MNSMFS FDAFAAE +LGKF TAS+SVP   P+     +A S         K+E    AK K++   PRFALE DG+NCFET+VPN
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAVSL--------KDE----AKPKSTKGLPRFALEFDGINCFETIVPN

XP_011654674.1 uncharacterized protein LOC105435432 [Cucumis sativus]3.5e-1362.5Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAV----SLKDEAKPKSTKGL--PRFALEFDGINCFETIVPN
        MNSMFSLFDAFAAE +LG F  ASSSVP   P+N+ A+ AV      K E +PKS   L  PRFALE DG+NCFET+VPN
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAV----SLKDEAKPKSTKGL--PRFALEFDGINCFETIVPN

XP_022929066.1 uncharacterized protein LOC111435766 [Cucurbita moschata]7.3e-1154.65Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAVSL--------KDE----AKPKSTKGLPRFALEFDGINCFETIVPN
        MNSMFS FDAFAAE +LGKF TAS+SVP   P+     +A S         K+E    AK K++   PRFALE DG+NCFET+VPN
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAVSL--------KDE----AKPKSTKGLPRFALEFDGINCFETIVPN

XP_023522684.1 uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo]2.5e-1154.65Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAVSL--------KDE----AKPKSTKGLPRFALEFDGINCFETIVPN
        MNSMFS FDAFAAE ++GKF TAS+SVP   P+     +A S         KDE    AK K++   PRFALE DG+NCFET+VPN
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAVSL--------KDE----AKPKSTKGLPRFALEFDGINCFETIVPN

TrEMBL top hitse value%identityAlignment
A0A0A0KJT8 Uncharacterized protein1.7e-1362.5Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAV----SLKDEAKPKSTKGL--PRFALEFDGINCFETIVPN
        MNSMFSLFDAFAAE +LG F  ASSSVP   P+N+ A+ AV      K E +PKS   L  PRFALE DG+NCFET+VPN
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAV----SLKDEAKPKSTKGL--PRFALEFDGINCFETIVPN

A0A5D3C6N3 Uncharacterized protein1.4e-1257.14Show/hide
Query:  MNSMFSLFDAFAAEQILG-KFFTASSSVPP-----PSNHAAAAAV------SLKDEAKPKSTKGLPRFALEFDGINCFETIVPN
        MNSMFSLFDAFAAE +LG  F  ASSS+P       +N+AA++AV        K+E KPK++   PRFALE DG+NCFET+VPN
Subjt:  MNSMFSLFDAFAAEQILG-KFFTASSSVPP-----PSNHAAAAAV------SLKDEAKPKSTKGLPRFALEFDGINCFETIVPN

A0A6J1E0L6 uncharacterized protein LOC1110260662.4e-0749.37Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSVPPPSNHAAAAAVSLKDEA-----KPKSTKGL----PRFALEFDGINCFETIV
        MNSMFSLFDAFAAE ++ K F ASSS  P +    +      + A     +PKS K      PR A EFDG+NCFET+V
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSVPPPSNHAAAAAVSLKDEA-----KPKSTKGL----PRFALEFDGINCFETIV

A0A6J1EM23 uncharacterized protein LOC1114357663.5e-1154.65Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAVSL--------KDE----AKPKSTKGLPRFALEFDGINCFETIVPN
        MNSMFS FDAFAAE +LGKF TAS+SVP   P+     +A S         K+E    AK K++   PRFALE DG+NCFET+VPN
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSVP--PPSNHAAAAAVSL--------KDE----AKPKSTKGLPRFALEFDGINCFETIVPN

V4L1D3 Uncharacterized protein6.9e-0753.66Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSV-----------PPPSNHAAAAAVSL-KDEAKPKSTKGLPRFALEFDGINCFETIV
        MNSMFS FDA  AE I+GK FTA SSV             PS      A SL KDE    S    PRFALE DGI+CFETIV
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSV-----------PPPSNHAAAAAVSL-KDEAKPKSTKGLPRFALEFDGINCFETIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G32920.1 unknown protein4.7e-0846.75Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASS--SVPPPSNHAAAAAVSLKDEAKPKSTK-----GLPRFALEFDGINCFETIV
        MNSMFS FDA  AE ++GK   ASS  +    +  AAA     +++A   S K      +PRFALE DG++CFETIV
Subjt:  MNSMFSLFDAFAAEQILGKFFTASS--SVPPPSNHAAAAAVSLKDEAKPKSTK-----GLPRFALEFDGINCFETIV

AT1G32928.1 unknown protein9.5e-0946.99Show/hide
Query:  MNSMFSLFDAFAAEQILGKFFTASSSVPPPSNHAAA---------AAVSLKDEAKPKSTKGL----PRFALEFDGINCFETIV
        MNSMFS FDA  AE I+GK  TA+S V     ++A+         A++SLK + K      L    PRFALE DG++CFETIV
Subjt:  MNSMFSLFDAFAAEQILGKFFTASSSVPPPSNHAAA---------AAVSLKDEAKPKSTKGL----PRFALEFDGINCFETIV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAGCAGATCCTCGGCAAATTCTTTACGGCTTCTTCCTCTGTGCCGCCGCCGTCCAACCACGCCGCCGCCGC
CGCCGTTTCTCTGAAAGACGAAGCAAAACCTAAGTCTACTAAGGGGCTGCCGAGATTTGCTTTGGAGTTTGATGGCATCAATTGCTTTGAGACTATTGTTCCCAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCCATGTTCAGTTTGTTCGATGCCTTCGCCGCCGAGCAGATCCTCGGCAAATTCTTTACGGCTTCTTCCTCTGTGCCGCCGCCGTCCAACCACGCCGCCGCCGC
CGCCGTTTCTCTGAAAGACGAAGCAAAACCTAAGTCTACTAAGGGGCTGCCGAGATTTGCTTTGGAGTTTGATGGCATCAATTGCTTTGAGACTATTGTTCCCAATTAA
Protein sequenceShow/hide protein sequence
MNSMFSLFDAFAAEQILGKFFTASSSVPPPSNHAAAAAVSLKDEAKPKSTKGLPRFALEFDGINCFETIVPN