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Sed0002275 (gene) of Chayote v1 genome

Gene IDSed0002275
OrganismSechium edule (Chayote v1)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationLG02:48887584..48887946
RNA-Seq ExpressionSed0002275
SyntenySed0002275
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049489.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa]2.0e-4579.17Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVWIFD GVIRLVER G+VET  +   GGS     +RKVL+YTPTNE MTSY VL+NKLS LGWEVYYED EV+QFHKP SVDLISLP DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQSH
        LYDIVVRNRNLFQVKDMQSH
Subjt:  LYDIVVRNRNLFQVKDMQSH

KGN57101.1 hypothetical protein Csa_010574 [Cucumis sativus]2.9e-4477.5Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVWIFD GVIRLVER G+ ET  + G G       +RKVL+YTPTNE MTSY VL+NKLS LGWEVYYED EV+QFHKP SVDLISLP DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQSH
        LYDIVVRNRNLFQVKDMQSH
Subjt:  LYDIVVRNRNLFQVKDMQSH

XP_022956217.1 flowering-promoting factor 1-like protein 1 [Cucurbita moschata]4.1e-4377.31Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVW+FD GVIRLVER G+ ET    G GG      RRKVL+YTPTNE MTSY VLKNKL+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQS
        LYDIVV+NRN+FQVKDMQS
Subjt:  LYDIVVRNRNLFQVKDMQS

XP_022979994.1 flowering-promoting factor 1-like protein 1 [Cucurbita maxima]8.3e-4478.15Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVW+FD GVIRLVER G+VET    G GG      RRKVL+YTPTNE MTSY+VLKNKL+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQS
        LYDIVV+NRN+FQVKDMQS
Subjt:  LYDIVVRNRNLFQVKDMQS

XP_023528953.1 flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]2.0e-4275.63Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVW+FD GVIRLVER G+ ET    G GG      RRKVL+Y PTNE MTSY +LKNKL+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQS
        LYDIVV+NRN+FQVKDMQS
Subjt:  LYDIVVRNRNLFQVKDMQS

TrEMBL top hitse value%identityAlignment
A0A0A0LAK6 Uncharacterized protein1.4e-4477.5Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVWIFD GVIRLVER G+ ET  + G G       +RKVL+YTPTNE MTSY VL+NKLS LGWEVYYED EV+QFHKP SVDLISLP DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQSH
        LYDIVVRNRNLFQVKDMQSH
Subjt:  LYDIVVRNRNLFQVKDMQSH

A0A5A7U7L7 Flowering-promoting factor 1-like protein 39.6e-4679.17Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVWIFD GVIRLVER G+VET  +   GGS     +RKVL+YTPTNE MTSY VL+NKLS LGWEVYYED EV+QFHKP SVDLISLP DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQSH
        LYDIVVRNRNLFQVKDMQSH
Subjt:  LYDIVVRNRNLFQVKDMQSH

A0A6J1GVQ4 flowering-promoting factor 1-like protein 12.0e-4377.31Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVW+FD GVIRLVER G+ ET    G GG      RRKVL+YTPTNE MTSY VLKNKL+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQS
        LYDIVV+NRN+FQVKDMQS
Subjt:  LYDIVVRNRNLFQVKDMQS

A0A6J1IC95 flowering-promoting factor 1-like protein 21.9e-3871.43Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVW+FD GVIRL           AEGGGGS    R R VL+YT TNE MT+  VLKNKL SLGWE+YYED+E+VQFHKP SVDLISLP DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQS
        LYD+VVRNRNLF VKDMQS
Subjt:  LYDIVVRNRNLFQVKDMQS

A0A6J1IY48 flowering-promoting factor 1-like protein 14.0e-4478.15Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVW+FD GVIRLVER G+VET    G GG      RRKVL+YTPTNE MTSY+VLKNKL+SLGWEVYYEDSEV+QFHKP SVDLIS+P DFNK+KARH
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKDMQS
        LYDIVV+NRN+FQVKDMQS
Subjt:  LYDIVVRNRNLFQVKDMQS

SwissProt top hitse value%identityAlignment
Q0E1D7 Flowering-promoting factor 1-like protein 31.5e-2750.86Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        M+GVW+F  G++R VE PGS E+++A  GGG      RRKVLV+ P+ E + SY VL+ +L  LGWE Y  D  ++QFH+  +V LIS+P DF+K K  H
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKD
        +YDIVV+ RN+F+V+D
Subjt:  LYDIVVRNRNLFQVKD

Q5Q0B3 Flowering-promoting factor 1-like protein 14.0e-2547.58Show/hide
Query:  MSGVWIFDK-GVIRLVERP---GSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYY---EDSEVVQFHKPCSVDLISLPIDF
        MSGVW+F+K GV+RLVE P    + +++ +   GG+     RRK+LV+ P++E ++SY  L+  L +LGWE YY       ++QFHK  S+DLISLP DF
Subjt:  MSGVWIFDK-GVIRLVERP---GSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYY---EDSEVVQFHKPCSVDLISLPIDF

Query:  NKIKARHLYDIVVRNRNLFQVKDM
        +K  + H+YDIVV+N N+F V+DM
Subjt:  NKIKARHLYDIVVRNRNLFQVKDM

Q8LR63 Flowering-promoting factor 1-like protein 22.8e-2648.82Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPR--RRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYED--------SEVVQFHKPCSVDLISLP
        MSGVW+F  GV++LVE P +   +   GGGG  G     RRK L++ PT E +TSYA L+ KL++LGWE YY          + ++QFHK  SVDLISLP
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPR--RRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYED--------SEVVQFHKPCSVDLISLP

Query:  IDFNKIKARHLYDIVVRNRNLFQVKDM
         DF++  + H+YDIVV+NR+ F+V D+
Subjt:  IDFNKIKARHLYDIVVRNRNLFQVKDM

Q9LGE3 Flowering-promoting factor 1-like protein 17.4e-2750.86Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH
        MSGVW+F  GV+RLVE+  +    A  GG        RRK LV+TP+ + ++SYA L+ +L++LGWE YYED  + QFHK  S+DLISLP DF+   + H
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARH

Query:  LYDIVVRNRNLFQVKD
        +YDIVV+NR+ F+V D
Subjt:  LYDIVVRNRNLFQVKD

Q9LXB5 Flowering-promoting factor 1-like protein 21.3e-2652.99Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYE-DSEVVQFHKPCSVDLISLPIDFNKIKAR
        MSGVW+F+ GVIRLVE P        + GG S+ S  RR VLVY PT E ++SY+ L+  L SLGWE Y+  DS+++Q+HK  S+DLISLP DF+K  + 
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYE-DSEVVQFHKPCSVDLISLPIDFNKIKAR

Query:  HLYDIVVRNRNLFQVKD
        ++YDIVV+N N F V+D
Subjt:  HLYDIVVRNRNLFQVKD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 12.9e-2647.58Show/hide
Query:  MSGVWIFDK-GVIRLVERP---GSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYY---EDSEVVQFHKPCSVDLISLPIDF
        MSGVW+F+K GV+RLVE P    + +++ +   GG+     RRK+LV+ P++E ++SY  L+  L +LGWE YY       ++QFHK  S+DLISLP DF
Subjt:  MSGVWIFDK-GVIRLVERP---GSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYY---EDSEVVQFHKPCSVDLISLPIDF

Query:  NKIKARHLYDIVVRNRNLFQVKDM
        +K  + H+YDIVV+N N+F V+DM
Subjt:  NKIKARHLYDIVVRNRNLFQVKDM

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)8.9e-2852.99Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYE-DSEVVQFHKPCSVDLISLPIDFNKIKAR
        MSGVW+F+ GVIRLVE P        + GG S+ S  RR VLVY PT E ++SY+ L+  L SLGWE Y+  DS+++Q+HK  S+DLISLP DF+K  + 
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYE-DSEVVQFHKPCSVDLISLPIDFNKIKAR

Query:  HLYDIVVRNRNLFQVKD
        ++YDIVV+N N F V+D
Subjt:  HLYDIVVRNRNLFQVKD

AT5G24860.1 flowering promoting factor 13.7e-2650Show/hide
Query:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYY--EDSEVVQFHKPCSVDLISLPIDFNKIKA
        MSGVW+F  GVIRLVE P              S +  RRKV+VY PT E ++SY+ L+  L SLGWE Y+   D++++QFHK  S+DLISLP DF K  +
Subjt:  MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYY--EDSEVVQFHKPCSVDLISLPIDFNKIKA

Query:  RHLYDIVVRNRNLFQVKD
         ++YDIVV+N N F V+D
Subjt:  RHLYDIVVRNRNLFQVKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGTGTTTGGATATTCGACAAGGGCGTAATCCGGCTGGTGGAGAGGCCGGGTTCGGTGGAGACAGCGGCAGCGGAGGGCGGAGGAGGAAGCAGTGGCAGCCCGAG
GCGGCGGAAGGTTCTGGTGTACACGCCGACGAACGAGGAGATGACGTCGTACGCGGTGCTTAAAAACAAGCTTTCGAGTTTAGGATGGGAAGTTTACTATGAAGATTCGG
AGGTTGTTCAGTTTCATAAGCCTTGTTCGGTTGACCTCATTTCTCTTCCTATTGACTTTAACAAGATCAAGGCCAGGCACTTGTACGACATCGTCGTTAGGAATCGTAAT
CTTTTTCAAGTTAAGGACATGCAGTCTCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGTGTTTGGATATTCGACAAGGGCGTAATCCGGCTGGTGGAGAGGCCGGGTTCGGTGGAGACAGCGGCAGCGGAGGGCGGAGGAGGAAGCAGTGGCAGCCCGAG
GCGGCGGAAGGTTCTGGTGTACACGCCGACGAACGAGGAGATGACGTCGTACGCGGTGCTTAAAAACAAGCTTTCGAGTTTAGGATGGGAAGTTTACTATGAAGATTCGG
AGGTTGTTCAGTTTCATAAGCCTTGTTCGGTTGACCTCATTTCTCTTCCTATTGACTTTAACAAGATCAAGGCCAGGCACTTGTACGACATCGTCGTTAGGAATCGTAAT
CTTTTTCAAGTTAAGGACATGCAGTCTCACTAG
Protein sequenceShow/hide protein sequence
MSGVWIFDKGVIRLVERPGSVETAAAEGGGGSSGSPRRRKVLVYTPTNEEMTSYAVLKNKLSSLGWEVYYEDSEVVQFHKPCSVDLISLPIDFNKIKARHLYDIVVRNRN
LFQVKDMQSH