CuGenDBv2

Gene ID	Sed0002279
Organism	Sechium edule (Chayote v1)
Description	Proteophosphoglycan-like protein
Genome location	LG05:33829282..33833180
RNA-Seq Expression	Sed0002279
Synteny	Sed0002279
Gene Ontology terms	GO:0044237 - cellular metabolic process (biological process)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144518.1 uncharacterized protein LOC101206223 [Cucumis sativus]

7.2e-67

69.53

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------
        MAKTNKY SINFNHI++KNL+  SK+GNN   N NPS + SSSSF +ATYSSISSPNKSHGRMLVLTRPTP+PI  P PLS   QSRP SAD        
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------

Query:  LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSG
          +S SDSISLRPLGRTG+GA+A   +P   L+KD+EI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR +GNYGS  R+GEDGRPKSG
Subjt:  LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSG

Query:  GGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        GGYE M+  GEADLG A VNRPRSSGN PS SG
Subjt:  GGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

XP_008455486.1 PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo]

1.8e-65

69.1

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------
        MAKTNKY SINFNHI++KNL+  SK+GNN   N NPS + SSSSF +ATYSSISSPNKSHGRMLVLTRPTPKPI  P  LS   QSRP SAD        
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------

Query:  LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSG
          +S SDSISLRPLGRTG+GA+A   +P   L+K++EI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR +GNYGS +R+GEDGRPKSG
Subjt:  LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSG

Query:  GGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        GGYE M+  GEADLG A VNRPRSSGN PS SG
Subjt:  GGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

XP_023554573.1 uncharacterized protein LOC111811777 isoform X2 [Cucurbita pepo subsp. pepo]

5.2e-65

68.09

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD------
        MAKTNKY SIN+NHI++K+L+  SK+G   NNPSKNP     SSSSF SATYSSISS NKSHGRMLVLTRPTPKPI+ PP LS   QSR PSAD      
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD------

Query:  --LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPK
            +  SDSISLRPLGRTG+GA+A   +P   L+KDKEI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR +GNYGSP R+GEDGRPK
Subjt:  --LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPK

Query:  SGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        SGG YE +  AGEAD G A VNRPRSSGN P+ SG
Subjt:  SGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

XP_038888443.1 translation initiation factor IF-2 isoform X1 [Benincasa hispida]

5.4e-70

70.12

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP---------SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--
        MAKTNKY SINFNHI++KNL+  SK+G   NNPSKNP         SSSSF SATYSSISSPNKSHGRMLVLTRPTPKPI  PPPLS   Q RPPSAD  
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP---------SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--

Query:  -------LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA--------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFG
                 +S SDSISLRPLGRTG+G +A    PS  L+KDKEI PPA        KFVPPHLRAGFVGKEER VNVGIRSRE NQR +GNYGSP+R+G
Subjt:  -------LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA--------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFG

Query:  EDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        EDGRPKSGGGYE M+ AGEA+LG A VNRPRSSGN PS SG
Subjt:  EDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

XP_038888444.1 putative protein TPRXL isoform X2 [Benincasa hispida]

5.4e-70

70.12

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP---------SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--
        MAKTNKY SINFNHI++KNL+  SK+G   NNPSKNP         SSSSF SATYSSISSPNKSHGRMLVLTRPTPKPI  PPPLS   Q RPPSAD  
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP---------SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--

Query:  -------LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA--------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFG
                 +S SDSISLRPLGRTG+G +A    PS  L+KDKEI PPA        KFVPPHLRAGFVGKEER VNVGIRSRE NQR +GNYGSP+R+G
Subjt:  -------LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA--------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFG

Query:  EDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        EDGRPKSGGGYE M+ AGEA+LG A VNRPRSSGN PS SG
Subjt:  EDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K3D7 Uncharacterized protein

3.5e-67

69.53

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------
        MAKTNKY SINFNHI++KNL+  SK+GNN   N NPS + SSSSF +ATYSSISSPNKSHGRMLVLTRPTP+PI  P PLS   QSRP SAD        
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------

Query:  LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSG
          +S SDSISLRPLGRTG+GA+A   +P   L+KD+EI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR +GNYGS  R+GEDGRPKSG
Subjt:  LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSG

Query:  GGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        GGYE M+  GEADLG A VNRPRSSGN PS SG
Subjt:  GGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

A0A1S3C160 translation initiation factor IF-2 isoform X1

8.6e-66

69.1

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------
        MAKTNKY SINFNHI++KNL+  SK+GNN   N NPS + SSSSF +ATYSSISSPNKSHGRMLVLTRPTPKPI  P  LS   QSRP SAD        
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNN---NNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD--------

Query:  LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSG
          +S SDSISLRPLGRTG+GA+A   +P   L+K++EI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR +GNYGS +R+GEDGRPKSG
Subjt:  LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSG

Query:  GGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        GGYE M+  GEADLG A VNRPRSSGN PS SG
Subjt:  GGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

A0A6J1GJZ3 uncharacterized protein LOC111455051 isoform X1

3.3e-65

68.09

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD------
        MAKTNKY SIN+NHI++K+L+  SK+G   NNPSKNP     SSSSF SATYSSISS NKSHGRMLVLTRPTPKPI+ PP LS   QSR PSAD      
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD------

Query:  --LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPK
            +  SDSISLRPLGRTG+GA+A   +P   L+KDKEI PP        KFVPPHLRAGFVGKEER V+VGIRSRE NQR +GNYGSP R+GEDGRPK
Subjt:  --LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPK

Query:  SGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        SGG YE M  AGEAD G A VNRPRSSGN P+ SG
Subjt:  SGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

A0A6J1GK55 uncharacterized protein LOC111455051 isoform X2

3.3e-65

68.09

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD------
        MAKTNKY SIN+NHI++K+L+  SK+G   NNPSKNP     SSSSF SATYSSISS NKSHGRMLVLTRPTPKPI+ PP LS   QSR PSAD      
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP-----SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD------

Query:  --LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPK
            +  SDSISLRPLGRTG+GA+A   +P   L+KDKEI PP        KFVPPHLRAGFVGKEER V+VGIRSRE NQR +GNYGSP R+GEDGRPK
Subjt:  --LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPK

Query:  SGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        SGG YE M  AGEAD G A VNRPRSSGN P+ SG
Subjt:  SGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

A0A6J1I0F0 uncharacterized protein LOC111468300 isoform X2

8.9e-63

66.95

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Query:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP------SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD-----
        MAKTNKY SIN+NHI++K+L+  SK+G   NNPSKNP      SSSSF SATYSSISS NKSHGRMLVLTRPTPKPI+  P LS   QSR PSAD     
Subjt:  MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNP------SSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLS---QSRPPSAD-----

Query:  ---LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRP
             +  SDSISLRPLGRTG+GA+A   +P   L+KDKEI PP        KFVPPHLRAGFVGKEER VNVGIRSRE NQR +GNYGSP R+GEDGRP
Subjt:  ---LTRSLSDSISLRPLGRTGSGAVALPVAPSLTLDKDKEIAPPA-------KFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRP

Query:  KSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        KSGG  E M  AGEAD G   VNRPRSSGN P+ SG
Subjt:  KSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G54680.1 proteophosphoglycan-related

4.6e-19

39.24

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Query:  NKYASINFNHIHEKNLTGKSKSGNNNNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPP---PPLSQSRPPSADLTR-----SLSD---
        NKY SINFNHI  K            + PS   SSSS +SA+YSS++   +S+GRMLVLT+ +PKP+  P   P  + + PP +   R     ++SD   
Subjt:  NKYASINFNHIHEKNLTGKSKSGNNNNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPP---PPLSQSRPPSADLTR-----SLSD---

Query:  -SISLRPLGRTG-SGAVALPV-------APSLTLDKDKEIAP-PAKFVPPHLRAGFVGKEERHVNVGIRSRE----LNQRHFGNYGSPNR----FGEDGR
          ISLRPLG TG S +++ P+       AP +       ++P P +FVPPHLR GFV K+E+      R R+    LNQR   N   P +    +G+ GR
Subjt:  -SISLRPLGRTG-SGAVALPV-------APSLTLDKDKEIAP-PAKFVPPHLRAGFVGKEERHVNVGIRSRE----LNQRHFGNYGSPNR----FGEDGR

Query:  PKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG
        PKS GGYE +R              PR +GN P  SG
Subjt:  PKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

Sequences

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CDS sequence

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ATGGCAAAAACCAACAAATACGCCTCCATCAATTTCAATCACATCCACGAGAAGAATCTCACCGGAAAATCCAAATCTGGCAACAACAACAACAACCCCTCTAAAAACCC
TTCTTCTTCCTCGTTCACTTCTGCAACTTATTCTTCCATTTCTTCCCCCAACAAATCCCATGGCCGCATGCTTGTTCTGACCCGTCCTACCCCCAAACCCATCAACCCAC
CGCCGCCCCTTTCCCAATCTCGACCCCCATCCGCCGATCTCACCCGTTCCCTCTCCGATTCCATCTCTCTTCGCCCTCTCGGTCGAACCGGTTCCGGCGCGGTTGCGCTC
CCCGTCGCCCCCTCTCTGACCTTGGACAAGGACAAGGAGATTGCTCCTCCGGCGAAATTCGTGCCGCCTCATCTAAGGGCGGGTTTCGTCGGGAAGGAGGAGAGACATGT
GAACGTTGGGATCAGATCTAGAGAGCTGAATCAGAGGCATTTTGGGAATTATGGGTCTCCGAATCGGTTCGGGGAAGACGGGCGGCCGAAGTCCGGCGGTGGGTATGAGG
GGATGAGGCGGGCGGGTGAGGCAGATCTGGGGGCGGCGGCGGTGAACCGGCCGAGATCCAGTGGGAATCCGCCGAGTTTTAGTGGATGA

mRNA sequence

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CCAAATTAAATTCTAAGAATTCCAGCATTGCCAAGCAATCCATTTTCAATTTAATTATATATATAAATCCTCTCTTCTTTATTCTTCTTCTTCTTGATTCCCCTGTTTCT
GAACAAACCCACAAATCCCATAACCTTGAAAGTTCGATTGGTTTTGAATTGGCGGTGGTGGATGGCAAAAACCAACAAATACGCCTCCATCAATTTCAATCACATCCACG
AGAAGAATCTCACCGGAAAATCCAAATCTGGCAACAACAACAACAACCCCTCTAAAAACCCTTCTTCTTCCTCGTTCACTTCTGCAACTTATTCTTCCATTTCTTCCCCC
AACAAATCCCATGGCCGCATGCTTGTTCTGACCCGTCCTACCCCCAAACCCATCAACCCACCGCCGCCCCTTTCCCAATCTCGACCCCCATCCGCCGATCTCACCCGTTC
CCTCTCCGATTCCATCTCTCTTCGCCCTCTCGGTCGAACCGGTTCCGGCGCGGTTGCGCTCCCCGTCGCCCCCTCTCTGACCTTGGACAAGGACAAGGAGATTGCTCCTC
CGGCGAAATTCGTGCCGCCTCATCTAAGGGCGGGTTTCGTCGGGAAGGAGGAGAGACATGTGAACGTTGGGATCAGATCTAGAGAGCTGAATCAGAGGCATTTTGGGAAT
TATGGGTCTCCGAATCGGTTCGGGGAAGACGGGCGGCCGAAGTCCGGCGGTGGGTATGAGGGGATGAGGCGGGCGGGTGAGGCAGATCTGGGGGCGGCGGCGGTGAACCG
GCCGAGATCCAGTGGGAATCCGCCGAGTTTTAGTGGATGAGATTCATTCTGAAGTTGGACATTCTCCAAAGATGAAGATGGATCACCATTTGAACCACAAGCCAGTCAGA
AATATAATTTTGTTTTCTTCTTTTTTTAGAATTCTTAGTCATGGAAGATGAACTGATACCACCAAGGTGACAGATCTCAACAATGAAGTGTCATACTTCAAAATTCAGAT
TGCAGCATCCAACATTTTATTGATTGGTAGTTTGCCTTCACCCTCTTCTGTTTTTATTTCGAAGCGACATATGGTTGTTTCGGAATGTAGAACTGACCAGTGTTATGCGT
TGTCTTTTTCGTTATCGTTAACTGACCGGTATGGAGGACGCTCCTCCTGTGTTTTTTTACCAAGTTGTGTAAAATAAAGACTCTTCTTGTGTGAGGATTTTAGGTGTCAT
CATTCAGTTTGTTAATTATGGTCTATCATTGTAATTCATTGTTGAATTCTTTCGGGAGAATATGAATCAAATGCCCTTTCTAATGCAAACGCAGGTTAGGTATAAATAAC
TCATTTACTCCAATTTTGTAGTTTGTCAGC

Protein sequence

Show/hide protein sequence

MAKTNKYASINFNHIHEKNLTGKSKSGNNNNNPSKNPSSSSFTSATYSSISSPNKSHGRMLVLTRPTPKPINPPPPLSQSRPPSADLTRSLSDSISLRPLGRTGSGAVAL
PVAPSLTLDKDKEIAPPAKFVPPHLRAGFVGKEERHVNVGIRSRELNQRHFGNYGSPNRFGEDGRPKSGGGYEGMRRAGEADLGAAAVNRPRSSGNPPSFSG

Sed0002279 (gene) of Chayote v1 genome