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Sed0002285 (gene) of Chayote v1 genome

Gene IDSed0002285
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG01:1838324..1839052
RNA-Seq ExpressionSed0002285
SyntenySed0002285
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605019.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4492.78Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAK  LKMQS FTK+QLDVPKGHVAVYVGEIQRKRF+VPI+YLNHPSFQ+LLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

XP_022146170.1 auxin-responsive protein SAUR21-like [Momordica charantia]5.1e-4493.81Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAK  LKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

XP_022944365.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.5e-4392.78Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIR LSLVPHAK  LKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

XP_022947574.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]5.1e-4492.78Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAK  LKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHHPQG LTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

XP_022947577.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.5e-4391.75Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAK  LKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LL HAEEEFGFHHPQG LTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A6J1CWI9 auxin-responsive protein SAUR21-like2.5e-4493.81Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAK  LKMQSSFTKNQ+DVPK HVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEEEFGFHHPQG LTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like7.1e-4492.78Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIR LSLVPHAK  LKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

A0A6J1G6U7 auxin-responsive protein SAUR21-like7.1e-4491.75Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAK  LKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LL HAEEEFGFHHPQG LTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

A0A6J1G772 auxin-responsive protein SAUR21-like2.5e-4492.78Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIRLLSLVPHAK  LKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQ+LLSHAEEEFGFHHPQG LTIPC+EDAF+DLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like7.1e-4492.78Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        MGIR LSLVPHAK  LKMQS FTKNQLDVPKGHVAVYVGEIQRKRFVVPI+YLNHPSFQQLLSHAEE+FGFHHPQG LTIPCKEDAFIDLTSRLQVS
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A55.7e-2251.06Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRL
        MG R+  +V    F+    +S    ++DVPKG+ AVYVG+ + +RF +P++YLN PSFQ+LLS AEEEFG+ HP G LTIPCKE+ F+++T+ L
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR229.7e-2262.03Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +E+EFGF HP G LTIPC ED FI++TSRLQ
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR205.7e-2263.29Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSR Q
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR192.2e-2162.03Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP++YL+ PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR245.7e-2271.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family6.6e-2658.16Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS
        M IR+  ++  +K  LK   S + N + +PKGH+AVYVGE +Q++RFVVP+TYL+HP FQ+LL  AEEEFGF HP G LTIPC E  FIDL SRL  S
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGE-IQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS

AT4G34810.1 SAUR-like auxin-responsive protein family1.3e-2454.29Show/hide
Query:  MGIRLLSLVPHAKFFLKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDL-
        MG+   ++    K  LK+ S   +N+        VPKGHVAVYVG   E+++KRFVVPI++LNHPSF++ LS AEEEFGF+HP G LTIPC+E+ F+DL 
Subjt:  MGIRLLSLVPHAKFFLKMQSSFTKNQLD------VPKGHVAVYVG---EIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family9.6e-2556.7Show/hide
Query:  MGIRLLSLVPHAKFFLK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSR
        M IR+  ++  +K  L+    + SS + + LDVPKG++AVYVGE   KRFVVP++YL+ PSFQ LL  AEEEFGF HP G LTIPC E+ FIDL SR
Subjt:  MGIRLLSLVPHAKFFLK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family4.0e-2363.29Show/hide
Query:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VPI+YLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSR Q
Subjt:  KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family4.0e-2371.21Show/hide
Query:  PKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ
        PKG +AVYVGE Q+KR++VP++YLN PSFQ LLS +EEEFGF HP G LTIPC ED FI++TSRLQ
Subjt:  PKGHVAVYVGEIQRKRFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATGCCCATTAGTTGGGAAAAAAATTCACTTCCTGAGTGTTGTTGCTGCTGGTGTTGTGGACCCTCTTGATCTAAGCAAGTGTGAAAAGCTGGACTATGACTTGAC
TTGTGATCAATGGAAAGAATTGACCAATGAGCCTGAAATTTGTGTTAGCTCTATACCAACCAGATCAGAACACTTTTATCCCGAGCAAATGGGGATTCGGTTGCTATCGT
TGGTTCCTCATGCCAAATTTTTTTTAAAAATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCACGTAGCCGTTTATGTGGGAGAGATCCAAAGGAAG
CGGTTTGTGGTTCCGATAACTTACCTAAACCATCCTTCATTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACCCACAAGGGTGCCTAACAATTCC
TTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATGCCCATTAGTTGGGAAAAAAATTCACTTCCTGAGTGTTGTTGCTGCTGGTGTTGTGGACCCTCTTGATCTAAGCAAGTGTGAAAAGCTGGACTATGACTTGAC
TTGTGATCAATGGAAAGAATTGACCAATGAGCCTGAAATTTGTGTTAGCTCTATACCAACCAGATCAGAACACTTTTATCCCGAGCAAATGGGGATTCGGTTGCTATCGT
TGGTTCCTCATGCCAAATTTTTTTTAAAAATGCAGTCAAGTTTCACCAAAAACCAGTTGGATGTTCCAAAAGGCCACGTAGCCGTTTATGTGGGAGAGATCCAAAGGAAG
CGGTTTGTGGTTCCGATAACTTACCTAAACCATCCTTCATTCCAGCAACTGCTCAGCCATGCCGAGGAGGAGTTTGGCTTCCATCACCCACAAGGGTGCCTAACAATTCC
TTGCAAAGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA
Protein sequenceShow/hide protein sequence
MECPLVGKKIHFLSVVAAGVVDPLDLSKCEKLDYDLTCDQWKELTNEPEICVSSIPTRSEHFYPEQMGIRLLSLVPHAKFFLKMQSSFTKNQLDVPKGHVAVYVGEIQRK
RFVVPITYLNHPSFQQLLSHAEEEFGFHHPQGCLTIPCKEDAFIDLTSRLQVS