; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002299 (gene) of Chayote v1 genome

Gene IDSed0002299
OrganismSechium edule (Chayote v1)
DescriptionX-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like
Genome locationLG08:33444212..33444814
RNA-Seq ExpressionSed0002299
SyntenySed0002299
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583719.1 hypothetical protein SDJN03_19651, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3953.62Show/hide
Query:  MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFS----LFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLAT
        ME+  E +++DS ESL+LD       S S+ VE LKRMVKF+VS+CVFS    LF S FS+FPHSF+VY  TFLFSLLNH +ERK MF ICN ILF+LAT
Subjt:  MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFS----LFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLAT

Query:  CSSVID--------QDSSFETCSFSHSFIVDDDKFDHLVAA------------------------IEEQNQELEEISEGKLDEELDEDEEAEEKLEEKG-
         S + D          SSF  CSFSHS  V  D+F+H + A                         E + QE +E  EG   EE++E+EE EE+ EE+G 
Subjt:  CSSVID--------QDSSFETCSFSHSFIVDDDKFDHLVAA------------------------IEEQNQELEEISEGKLDEELDEDEEAEEKLEEKG-

Query:  -KELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT
         ++LEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT
Subjt:  -KELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT

KAG7019366.1 hypothetical protein SDJN02_18326, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-3954.04Show/hide
Query:  MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFS----LFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLAT
        ME+  EA+++DS ESL+LD       S S+ VE LKRMVKF+VS+CVFS    LF S FSLFPHSF+VY  TFLFSLLNH +ERK MF ICN ILF+LAT
Subjt:  MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFS----LFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLAT

Query:  CSSVID--------QDSSFETCSFSHSFIVDDDKFDHLVAA-------------------------IEEQNQELEEISEGKLDEELDEDEEAEEKLEE-K
         S + D          SSF  CSFSHS  V  D+F+H + A                          E + QE +E  EG   EE++E+EE EE+ EE  
Subjt:  CSSVID--------QDSSFETCSFSHSFIVDDDKFDHLVAA-------------------------IEEQNQELEEISEGKLDEELDEDEEAEEKLEE-K

Query:  GKELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT
         ++LEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT
Subjt:  GKELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT

XP_022142572.1 nardilysin-like [Momordica charantia]4.6e-3153.77Show/hide
Query:  MEQNPEAMDLDSNESLNLDGRI-GNWRSNSSKVEILKRMVKFVVSVCVF----SLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLA
        ME++P+A DLDS+ESLNLDG    NW   SSKV+ LK MVKFVVSVCVF    +LFLS+FSLFPHSF++Y    LFSLLNHA++R  MF +CN IL +LA
Subjt:  MEQNPEAMDLDSNESLNLDGRI-GNWRSNSSKVEILKRMVKFVVSVCVF----SLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLA

Query:  TCSSVIDQDSS-----FETCSFSHSFIVDDDKFDHL------VAAIEEQNQEL-EEISEGKLDEELDEDEEAEEKLEEKGKELEVVVSTEELNKKIEEFI
        T  S +   +S     +E         V+DD  D        +AA+   +  + EE  EG   +E++E+EE EE   ++ +ELEVVVSTEELNKKIEEFI
Subjt:  TCSSVIDQDSS-----FETCSFSHSFIVDDDKFDHL------VAAIEEQNQEL-EEISEGKLDEELDEDEEAEEKLEEKGKELEVVVSTEELNKKIEEFI

Query:  RKMKEEMRIEAA
        RKMKEEMRI+AA
Subjt:  RKMKEEMRIEAA

XP_022927104.1 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Cucurbita moschata]1.1e-3552.44Show/hide
Query:  MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFS----LFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLAT
        ME   EA+++DS ESL+LD       S ++ VE LKRMVKF+VS+CVFS    LF S FSLFPHSF+VY  TFLFSLLNH +ERK MF ICN ILF+LAT
Subjt:  MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFS----LFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLAT

Query:  CSSVID---------QDSSFETCSFSHSFIVDDDKFDH-LVA-------AIEEQNQELEEISEGKLDEELDE--------------------------DE
         S + D           SSF   SFSHS  V  D+F+H LVA       + E + QE EE  +   DE  DE                           E
Subjt:  CSSVID---------QDSSFETCSFSHSFIVDDDKFDH-LVA-------AIEEQNQELEEISEGKLDEELDE--------------------------DE

Query:  EAEEKLEEKGK--ELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT
        E EE+ EE+GK  +LEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT
Subjt:  EAEEKLEEKGK--ELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT

XP_038877796.1 glutamic acid-rich protein-like [Benincasa hispida]2.4e-4056.77Show/hide
Query:  MEQNPEAMDLDSNESLNLDGRIGNWRSNS------SKVEILKRMVKFVVSVCVFSLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVL
        ME+ PEA +LDSN+SLNL     + R++S      SKVE+L RMVKF V   V +LF S FSLFPHSFSVY  TF+FSLLNHA+ERK MF ICN ILF+L
Subjt:  MEQNPEAMDLDSNESLNLDGRIGNWRSNS------SKVEILKRMVKFVVSVCVFSLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVL

Query:  ATCSSVID---QDSSFETCSF-SHSFIVDDDKFDH-LVAAI-------------EEQNQELEEISEGKLDEELDED--------EEAEEKLEEKGKELEV
        AT S + D     SSF TCSF SHS      + +H LVAAI             EE+ +E EEI   +L+EE++ED        E+ +E+ E K +ELEV
Subjt:  ATCSSVID---QDSSFETCSF-SHSFIVDDDKFDH-LVAAI-------------EEQNQELEEISEGKLDEELDED--------EEAEEKLEEKGKELEV

Query:  VVSTEELNKKIEEFIRKMKEEMRIEAAQT
        VVSTEELNKKIEEFIRKMKEEMRIEAAQT
Subjt:  VVSTEELNKKIEEFIRKMKEEMRIEAAQT

TrEMBL top hitse value%identityAlignment
A0A0A0LVQ2 Uncharacterized protein1.5e-1444.13Show/hide
Query:  SNESLNLDGRIGNWRSN------SSKVEILKRMVKFVVSVCVFSLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICN-AILFVLATCS-SVIDQ
        S  SLNL+     +RS       SSKVE LKRMVK  V   +  LF S+FSLFPHSFSVY  TFLFS+L HA+ERK MF ICN  ILF+LAT S S    
Subjt:  SNESLNLDGRIGNWRSN------SSKVEILKRMVKFVVSVCVFSLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICN-AILFVLATCS-SVIDQ

Query:  DSSF-ETCSFSHS-FIVDDDKFDH-LVAAI------------EEQNQELEEISEGK-LDEELDEDE-------EAEEKLEEKGKELEVVVSTEELNKKIE
         SSF   C F HS      + F+H +VAA+            EE+ ++ E I  G+ L+EEL+EDE       E EE+ E++GK+           ++ +
Subjt:  DSSF-ETCSFSHS-FIVDDDKFDH-LVAAI------------EEQNQELEEISEGK-LDEELDEDE-------EAEEKLEEKGKELEVVVSTEELNKKIE

Query:  EFIRKMKEEMRIE
        E IR   E  RIE
Subjt:  EFIRKMKEEMRIE

A0A1S3VGB0 uncharacterized protein LOC1067748827.2e-1438.69Show/hide
Query:  EILKRMVKFVVSVCVFSLFL---SIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLATCSSVIDQDSSF---ETCSFSHSFIV--------
        + LKR ++FV+SV VFS+F+   S FS+ P SF+ Y  T LFS+  H ++RK MF +CN IL  +A  S +   DS F   ET +     +V        
Subjt:  EILKRMVKFVVSVCVFSLFL---SIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLATCSSVIDQDSSF---ETCSFSHSFIV--------

Query:  -DDDKFDHLVAAIEEQNQEL-------------EEISEGKLDEELD---EDEEAEEKLEEKGKELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTIIS
           +++   V+  EEQ Q+              EEI EG+ D E++   +DE AE       +EL   ++T+ELN+K EEFIRKMKEE+RIEA + +I+
Subjt:  -DDDKFDHLVAAIEEQNQEL-------------EEISEGKLDEELD---EDEEAEEKLEEKGKELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTIIS

A0A6J1CN51 nardilysin-like2.2e-3153.77Show/hide
Query:  MEQNPEAMDLDSNESLNLDGRI-GNWRSNSSKVEILKRMVKFVVSVCVF----SLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLA
        ME++P+A DLDS+ESLNLDG    NW   SSKV+ LK MVKFVVSVCVF    +LFLS+FSLFPHSF++Y    LFSLLNHA++R  MF +CN IL +LA
Subjt:  MEQNPEAMDLDSNESLNLDGRI-GNWRSNSSKVEILKRMVKFVVSVCVF----SLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLA

Query:  TCSSVIDQDSS-----FETCSFSHSFIVDDDKFDHL------VAAIEEQNQEL-EEISEGKLDEELDEDEEAEEKLEEKGKELEVVVSTEELNKKIEEFI
        T  S +   +S     +E         V+DD  D        +AA+   +  + EE  EG   +E++E+EE EE   ++ +ELEVVVSTEELNKKIEEFI
Subjt:  TCSSVIDQDSS-----FETCSFSHSFIVDDDKFDHL------VAAIEEQNQEL-EEISEGKLDEELDEDEEAEEKLEEKGKELEVVVSTEELNKKIEEFI

Query:  RKMKEEMRIEAA
        RKMKEEMRI+AA
Subjt:  RKMKEEMRIEAA

A0A6J1EH25 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like5.2e-3652.44Show/hide
Query:  MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFS----LFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLAT
        ME   EA+++DS ESL+LD       S ++ VE LKRMVKF+VS+CVFS    LF S FSLFPHSF+VY  TFLFSLLNH +ERK MF ICN ILF+LAT
Subjt:  MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFS----LFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLAT

Query:  CSSVID---------QDSSFETCSFSHSFIVDDDKFDH-LVA-------AIEEQNQELEEISEGKLDEELDE--------------------------DE
         S + D           SSF   SFSHS  V  D+F+H LVA       + E + QE EE  +   DE  DE                           E
Subjt:  CSSVID---------QDSSFETCSFSHSFIVDDDKFDH-LVA-------AIEEQNQELEEISEGKLDEELDE--------------------------DE

Query:  EAEEKLEEKGK--ELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT
        E EE+ EE+GK  +LEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT
Subjt:  EAEEKLEEKGK--ELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQT

B9SA78 Uncharacterized protein1.2e-1337.5Show/hide
Query:  NSSKVEILKRMVKFVVSVCVFSLFL---SIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLA----TCSSVIDQDSSFETCSFSHSFIVDD
        + +K  +LK+   F+V+V +FSLFL   S FS+ P+SF VY  T LFS L   +ERK MF ICN IL  LA    + SS       F   S +   +VDD
Subjt:  NSSKVEILKRMVKFVVSVCVFSLFL---SIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLA----TCSSVIDQDSSFETCSFSHSFIVDD

Query:  DKFDHLVAAI----EEQNQELEEISEGKLDEELDEDEEAEEKLEEK--------------GKELEV------------------VVSTEELNKKIEEFIR
             +VA +    EE+ +++ E++    +EE +E+E+ E++ E K              G+E EV                  + +TEELN++IEEFIR
Subjt:  DKFDHLVAAI----EEQNQELEEISEGKLDEELDEDEEAEEKLEEK--------------GKELEV------------------VVSTEELNKKIEEFIR

Query:  KMKEEMRIEAAQTIIS
        KMKEE+RIEA Q +I+
Subjt:  KMKEEMRIEAAQTIIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13130.1 unknown protein4.8e-1033.99Show/hide
Query:  KVEILKRMVKFV-VSVCVFSLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLATCSSVI-----------DQDSSFETCSF-SHSFI
        K E LK++ KF+ VS+ + SL  S      H F  YL  F+  L+ HA+++  MF +CN ++ V+A CS ++           + D +F+   F S++ I
Subjt:  KVEILKRMVKFV-VSVCVFSLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLATCSSVI-----------DQDSSFETCSF-SHSFI

Query:  VD-DDKFDHLV---------AAIEE--QNQELEEISEGKLDEELDEDEEAEEKL--------EEKGKELEVVVST-EELNKKIEEFIRKMKEEMRIEAAQ
        ++ + K DH +           +EE  ++QE E+  E   D+    D + EE+         EE+   + V+ ST EE+NKK +EFIRKMKEE+RIEA +
Subjt:  VD-DDKFDHLV---------AAIEE--QNQELEEISEGKLDEELDEDEEAEEKL--------EEKGKELEVVVST-EELNKKIEEFIRKMKEEMRIEAAQ

Query:  TII
         +I
Subjt:  TII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAAAACCCAGAAGCCATGGATTTGGATTCAAATGAAAGTTTGAATCTTGATGGCAGAATTGGAAATTGGAGGAGCAATAGCAGCAAAGTAGAGATCTTGAAAAG
GATGGTGAAGTTTGTTGTGTCAGTTTGTGTTTTTTCTTTGTTTTTGTCCATTTTCTCTCTCTTCCCTCATTCTTTTAGTGTCTATTTGCCCACTTTTCTCTTCTCTCTCC
TCAACCATGCCATTGAGAGAAAGTGCATGTTCTTCATTTGCAATGCAATCCTTTTTGTTCTTGCCACTTGCAGCTCTGTCATTGATCAAGATTCTTCTTTTGAAACTTGT
TCATTTTCCCATTCTTTTATTGTTGACGATGATAAGTTTGATCATCTTGTGGCTGCCATTGAAGAGCAAAATCAAGAACTTGAAGAAATTAGTGAAGGTAAATTGGATGA
AGAATTAGATGAAGATGAAGAAGCTGAAGAAAAATTAGAAGAAAAGGGGAAGGAATTAGAGGTGGTGGTGAGTACAGAGGAATTGAACAAGAAAATAGAGGAATTTATTA
GGAAAATGAAAGAGGAAATGAGGATTGAAGCAGCTCAAACAATTATAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAAAACCCAGAAGCCATGGATTTGGATTCAAATGAAAGTTTGAATCTTGATGGCAGAATTGGAAATTGGAGGAGCAATAGCAGCAAAGTAGAGATCTTGAAAAG
GATGGTGAAGTTTGTTGTGTCAGTTTGTGTTTTTTCTTTGTTTTTGTCCATTTTCTCTCTCTTCCCTCATTCTTTTAGTGTCTATTTGCCCACTTTTCTCTTCTCTCTCC
TCAACCATGCCATTGAGAGAAAGTGCATGTTCTTCATTTGCAATGCAATCCTTTTTGTTCTTGCCACTTGCAGCTCTGTCATTGATCAAGATTCTTCTTTTGAAACTTGT
TCATTTTCCCATTCTTTTATTGTTGACGATGATAAGTTTGATCATCTTGTGGCTGCCATTGAAGAGCAAAATCAAGAACTTGAAGAAATTAGTGAAGGTAAATTGGATGA
AGAATTAGATGAAGATGAAGAAGCTGAAGAAAAATTAGAAGAAAAGGGGAAGGAATTAGAGGTGGTGGTGAGTACAGAGGAATTGAACAAGAAAATAGAGGAATTTATTA
GGAAAATGAAAGAGGAAATGAGGATTGAAGCAGCTCAAACAATTATAAGCTAA
Protein sequenceShow/hide protein sequence
MEQNPEAMDLDSNESLNLDGRIGNWRSNSSKVEILKRMVKFVVSVCVFSLFLSIFSLFPHSFSVYLPTFLFSLLNHAIERKCMFFICNAILFVLATCSSVIDQDSSFETC
SFSHSFIVDDDKFDHLVAAIEEQNQELEEISEGKLDEELDEDEEAEEKLEEKGKELEVVVSTEELNKKIEEFIRKMKEEMRIEAAQTIIS