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Sed0002332 (gene) of Chayote v1 genome

Gene IDSed0002332
OrganismSechium edule (Chayote v1)
Descriptionprotein LYK5-like
Genome locationLG13:21454703..21455445
RNA-Seq ExpressionSed0002332
SyntenySed0002332
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020534.1 LysM domain receptor-like kinase 4, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-0869.77Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLI
        CQ LKFGN+FHELDLR G+ L VP R ACPTTNQ R  V YL+
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLI

XP_011650189.1 protein LYK5 [Cucumis sativus]9.3e-0655.77Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQ----VRTRVNYLIGNGEK
        CQ LKF N F EL+LR G++L VP R ACPT NQ    V+    YL+GNGE+
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQ----VRTRVNYLIGNGEK

XP_022951877.1 protein LYK5-like [Cucurbita moschata]3.4e-0864.71Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLIGN--GEKD
        CQ LKFGN+FHELDLR G+ L VP R ACPTTNQ R  V YL+    GE D
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLIGN--GEKD

XP_023001993.1 protein LYK5-like [Cucurbita maxima]2.0e-0872.09Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLI
        CQ LKFGNRFHELDLR G+ LHVP R AC TTNQ R  V YL+
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLI

XP_023538340.1 protein LYK5-like [Cucurbita pepo subsp. pepo]5.8e-0869.77Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLI
        CQ LKFGN+FHELDLR G+ L VP R ACPTTNQ R  V YL+
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLI

TrEMBL top hitse value%identityAlignment
A0A0A0LRF4 Uncharacterized protein4.5e-0655.77Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQ----VRTRVNYLIGNGEK
        CQ LKF N F EL+LR G++L VP R ACPT NQ    V+    YL+GNGE+
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQ----VRTRVNYLIGNGEK

A0A1S3BBQ2 protein LYK5-like5.0e-0553.85Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQ----VRTRVNYLIGNGEK
        CQ LKF N F EL+LR G++L VP R ACPT NQ    V+    YL+G GE+
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQ----VRTRVNYLIGNGEK

A0A5A7VAS3 Protein LYK5-like5.0e-0553.85Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQ----VRTRVNYLIGNGEK
        CQ LKF N F EL+LR G++L VP R ACPT NQ    V+    YL+G GE+
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQ----VRTRVNYLIGNGEK

A0A6J1GIV8 protein LYK5-like1.7e-0864.71Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLIGN--GEKD
        CQ LKFGN+FHELDLR G+ L VP R ACPTTNQ R  V YL+    GE D
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLIGN--GEKD

A0A6J1KS69 protein LYK5-like9.7e-0972.09Show/hide
Query:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLI
        CQ LKFGNRFHELDLR G+ LHVP R AC TTNQ R  V YL+
Subjt:  CQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCAGACTCTTAAATTCGGTAATAGGTTCCATGAATTGGATCTTCGTCGTGGTGTACTGCTGCACGTGCCGCATAGAAGCGCTTGTCCGACCACGAACCAGGTCCG
TACTAGGGTCAATTATTTGATTGGCAATGGCGAAAAGGACAGATTAAAATCCCCGCTATTAATTCTCGTTGACTCACCTTTACTACTCTCTTCAATCGATTCTAGTTGCC
CCTTCTACGCTCATCTCTCGCTCTCCAACTTGAAGTTCAAGTTGGACGATCTAATAGAGGAATATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCCAGACTCTTAAATTCGGTAATAGGTTCCATGAATTGGATCTTCGTCGTGGTGTACTGCTGCACGTGCCGCATAGAAGCGCTTGTCCGACCACGAACCAGGTCCG
TACTAGGGTCAATTATTTGATTGGCAATGGCGAAAAGGACAGATTAAAATCCCCGCTATTAATTCTCGTTGACTCACCTTTACTACTCTCTTCAATCGATTCTAGTTGCC
CCTTCTACGCTCATCTCTCGCTCTCCAACTTGAAGTTCAAGTTGGACGATCTAATAGAGGAATATTAG
Protein sequenceShow/hide protein sequence
MCQTLKFGNRFHELDLRRGVLLHVPHRSACPTTNQVRTRVNYLIGNGEKDRLKSPLLILVDSPLLLSSIDSSCPFYAHLSLSNLKFKLDDLIEEY