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Sed0002341 (gene) of Chayote v1 genome

Gene IDSed0002341
OrganismSechium edule (Chayote v1)
DescriptionShikimate dehydrogenase
Genome locationLG03:27415196..27420443
RNA-Seq ExpressionSed0002341
SyntenySed0002341
Gene Ontology termsGO:0008652 - cellular amino acid biosynthetic process (biological process)
GO:0009073 - aromatic amino acid family biosynthetic process (biological process)
GO:0009423 - chorismate biosynthetic process (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0019632 - shikimate metabolic process (biological process)
GO:0003855 - 3-dehydroquinate dehydratase activity (molecular function)
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity (molecular function)
GO:0050661 - NADP binding (molecular function)
InterPro domainsIPR022893 - Shikimate dehydrogenase family
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045904.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase [Cucumis melo var. makuwa]2.9e-1275.93Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL+YY LVF+ VYT VM RLLK+ E SGAKIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
TYK13685.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase [Cucumis melo var. makuwa]2.9e-1275.93Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL+YY LVF+ VYT VM RLLK+ E SGAKIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
XP_008457914.1 PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Cucumis melo]2.9e-1275.93Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL+YY LVF+ VYT VM RLLK+ E SGAKIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
XP_011649384.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [Cucumis sativus]1.0e-1277.78Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+ALRYY LVF+ VYT VM RLLK+ E SGAKIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
XP_038901058.1 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [Benincasa hispida]5.9e-1377.78Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+ALRYY LVF+ VYT VM RLLK+ EESG KIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
TrEMBL top hitse value%identityAlignment
A0A0A0LQ48 Shikimate dehydrogenase4.9e-1377.78Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+ALRYY LVF+ VYT VM RLLK+ E SGAKIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
A0A1S3C6S2 Shikimate dehydrogenase1.4e-1275.93Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL+YY LVF+ VYT VM RLLK+ E SGAKIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
A0A5A7TS71 Shikimate dehydrogenase1.4e-1275.93Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL+YY LVF+ VYT VM RLLK+ E SGAKIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
A0A5D3CQ69 Shikimate dehydrogenase1.4e-1275.93Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL+YY LVF+ VYT VM RLLK+ E SGAKIV G EMFVGQ+YEQYERFTGM
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
A0A6J1L0I7 Shikimate dehydrogenase1.8e-1275.93Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL+ Y LVF+ VYT VM RLLKE EESGAKIV G EMFVGQ+YEQYERFTG+
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
SwissProt top hitse value%identityAlignment
Q9SQT8 Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic1.7e-1061.11Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL++Y LVF+ VYT  + RLL+E EESGA  V+G EMFV Q+YEQ+E FTG+
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
Arabidopsis top hitse value%identityAlignment
AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative1.2e-1161.11Show/hide
Query:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM
        K+AL++Y LVF+ VYT  + RLL+E EESGA  V+G EMFV Q+YEQ+E FTG+
Subjt:  KNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTGGCGAGTTGCAATTGAGTATTTCGAAAGGGAGCTCAAAAATGCTCTGAGATATTATTTACTAGTGTTCAATGTTGTTTACACGTTGGTCATGGCTAGGCTCTT
GAAAGAAACTGAAGAGTCTGGAGCCAAGATCGTTGCTGGTGAGGAGATGTTTGTTGGACAATCATATGAACAATATGAGAGGTTTACTGGGATGCTTGTTGGTGATTCTC
TGCAATTATTTGTGGGACTTACGACTTGGAAGGGTTCGGCTGCTAAAGAGAAGCGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTGGCGAGTTGCAATTGAGTATTTCGAAAGGGAGCTCAAAAATGCTCTGAGATATTATTTACTAGTGTTCAATGTTGTTTACACGTTGGTCATGGCTAGGCTCTT
GAAAGAAACTGAAGAGTCTGGAGCCAAGATCGTTGCTGGTGAGGAGATGTTTGTTGGACAATCATATGAACAATATGAGAGGTTTACTGGGATGCTTGTTGGTGATTCTC
TGCAATTATTTGTGGGACTTACGACTTGGAAGGGTTCGGCTGCTAAAGAGAAGCGTGTTTGA
Protein sequenceShow/hide protein sequence
MYWRVAIEYFERELKNALRYYLLVFNVVYTLVMARLLKETEESGAKIVAGEEMFVGQSYEQYERFTGMLVGDSLQLFVGLTTWKGSAAKEKRV