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Sed0002358 (gene) of Chayote v1 genome

Gene IDSed0002358
OrganismSechium edule (Chayote v1)
DescriptionLipoxygenase
Genome locationLG11:3218320..3224262
RNA-Seq ExpressionSed0002358
SyntenySed0002358
Gene Ontology termsGO:0006631 - fatty acid metabolic process (biological process)
GO:0046394 - carboxylic acid biosynthetic process (biological process)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000907 - Lipoxygenase
IPR001246 - Lipoxygenase, plant
IPR013819 - Lipoxygenase, C-terminal
IPR036226 - Lipoxigenase, C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047992.1 putative linoleate 9S-lipoxygenase 5 [Cucumis melo var. makuwa]7.8e-2365.88Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        +AY+PN+TPE L KYREDEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+LGGS +YPYPRRGRTGR P  + KNY
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

KAE8652023.1 hypothetical protein Csa_023391 [Cucumis sativus]8.6e-2263.53Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        +AY+PN+TPE L KYR+DEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+LGGS +YPYPRRGRTGR P  + K Y
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

XP_004139356.1 probable linoleate 9S-lipoxygenase 5 [Cucumis sativus]8.6e-2263.53Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        +AY+PN+TPE L KYR+DEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+LGGS +YPYPRRGRTGR P  + K Y
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

XP_008454500.1 PREDICTED: probable linoleate 9S-lipoxygenase 5 [Cucumis melo]7.8e-2365.88Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        +AY+PN+TPE L KYREDEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+LGGS +YPYPRRGRTGR P  + KNY
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

XP_022150808.1 probable linoleate 9S-lipoxygenase 5 [Momordica charantia]1.1e-2165.88Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        +AYLPN+TPE L KYRE+EL+ LRGD TG+R + +RIYDYDVYNDL        Y RPILGGSN+YPYPRRGRTGR P  + K Y
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

TrEMBL top hitse value%identityAlignment
A0A1S3BYA5 Lipoxygenase3.8e-2365.88Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        +AY+PN+TPE L KYREDEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+LGGS +YPYPRRGRTGR P  + KNY
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

A0A4Y7IIK5 Lipoxygenase7.1e-2259.34Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY------FNCYIIC
        Q+YL + TPE L KYREDEL+ LRGDGTG+    +R+YDY VYND+G +RP+LGGS E+PYPRRGRTGRKP ++   Y      FN  I C
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY------FNCYIIC

A0A4Y7KP50 Lipoxygenase1.2e-2166.67Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        Q+YL + TPE L KYREDEL+ILRGDG G+    +R+YDY +YNDLG DRPILG S E PYPRRGRTGRKP  +  NY
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

A0A5A7TWV9 Putative linoleate 9S-lipoxygenase 53.8e-2365.88Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        +AY+PN+TPE L KYREDEL+ LRGDGTG+R + +RIYDYDVYNDL        Y RP+LGGS +YPYPRRGRTGR P  + KNY
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

A0A6J1DAF3 Lipoxygenase5.5e-2265.88Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY
        +AYLPN+TPE L KYRE+EL+ LRGD TG+R + +RIYDYDVYNDL        Y RPILGGSN+YPYPRRGRTGR P  + K Y
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDL-------GYDRPILGGSNEYPYPRRGRTGRKPLSQGKNY

SwissProt top hitse value%identityAlignment
P09186 Seed linoleate 9S-lipoxygenase-34.8e-2360.71Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN
        Q YLP++TP  L KYRE+EL  LRGDGTG+R + ER+YDYDVYNDLG       + RP+LGG++ +PYPRRGRTGRKP  +  N
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN

P09918 Seed linoleate 9S-lipoxygenase-33.6e-2363.1Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN
        Q YLP++TP  L  YRE+EL  LRGDGTG+R + ERIYDYDVYNDLG       + RP+LGGS  YPYPRRGRTGRKP  +  N
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN

P14856 Seed linoleate 9S-lipoxygenase-21.8e-2261.9Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN
        ++YLP++TP  L KYRE+EL+ LRGDGTG+R   ERIYDYDVYNDLG         RPILGGS+ +PYPRRGRTGR P  +  N
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN

P37831 Linoleate 9S-lipoxygenase 13.1e-2267.95Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYD-------RPILGGSNEYPYPRRGRTGRKP
        Q YLP++TPELL KYRE+EL  LRGDGTGKR   +RIYDYD+YNDLG         R  LGGS EYPYPRRGRTGR P
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGYD-------RPILGGSNEYPYPRRGRTGRKP

P38416 Linoleate 9S-lipoxygenase B6.2e-2363.1Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN
        QAYLP++TP+ L KYRE+EL  LRGDGTGK  + +R+YDY  YNDLG       Y RPILGGS+EYPYPRRGRTGR+P     N
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKPLSQGKN

Arabidopsis top hitse value%identityAlignment
AT1G17420.1 lipoxygenase 33.4e-1647.22Show/hide
Query:  WIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGR
        W++S    P       +  F  N Q YLPN+TP  L   RE EL+ LRGDG+G R   +RIYD+DVYNDLG         RP LGG  E PYPRR RTGR
Subjt:  WIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGR

Query:  KPLSQGKN
        +     K+
Subjt:  KPLSQGKN

AT1G55020.1 lipoxygenase 16.0e-2148.15Show/hide
Query:  GKGKTRWIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGY----DRPILGGSNEYPYPRRGR
        G G+  +I +    P       R  FS   + YLP++TP  L KYRE+EL  LRG G G+  + +R+YDY  YNDLG      RP+LGG+ EYPYPRRGR
Subjt:  GKGKTRWIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLGY----DRPILGGSNEYPYPRRGR

Query:  TGRKPLSQ
        TGRKP  +
Subjt:  TGRKPLSQ

AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein2.0e-1648Show/hide
Query:  WIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGR
        W++S    P    L          Q YLP++TP  L   RE ELE LRG+G G+R   +RIYDYDVYND+G         RP LGG  E+PYPRR RTGR
Subjt:  WIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGR

AT3G22400.1 PLAT/LH2 domain-containing lipoxygenase family protein1.2e-1655.13Show/hide
Query:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKK-ERIYDYDVYNDLGYD-------RPILGGSNEYPYPRRGRTGRK
        +AYLP++TPEL+ + RE+EL+ LRG+  G   K+ +R+YDY  YNDLG         RP+LGGS E PYPRRG+TGRK
Subjt:  QAYLPNQTPELLCKYREDELEILRGDGTGKRSKK-ERIYDYDVYNDLGYD-------RPILGGSNEYPYPRRGRTGRK

AT3G45140.1 lipoxygenase 23.4e-1650Show/hide
Query:  SPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRG---DGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKP
        +PK+     R  FS   ++YLP+QTPE L KYR++ELE L+G   +  G+ +K ERIYDYDVYND+G         RP++GG   +PYPRR +TGRKP
Subjt:  SPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRG---DGTGKRSKKERIYDYDVYNDLG-------YDRPILGGSNEYPYPRRGRTGRKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAATTTGATTAAATTTTTTTGGGATCACCGGCATCATTTTAATCGTGTGGTTGAGAGGATTGCTCGCACTTTAGTCGCATGGCGCTTTCGACATGTAGGGAA
AGGGAAGACGAGATGGATCGAAAGTGGATCGACTTCACCAAAAACTTCAAGTTTGAGAGGTCGTTCATCTTTTTCCTTGAACGTTCAAGCATATCTTCCAAATCAAACAC
CAGAGCTGCTATGCAAATATAGAGAAGATGAGCTCGAAATTTTGAGAGGAGATGGAACAGGAAAGAGGTCAAAAAAAGAAAGAATATATGATTATGATGTCTACAATGAT
CTCGGATACGATCGTCCCATTCTTGGAGGCTCCAACGAATATCCTTATCCACGTCGAGGAAGAACGGGACGCAAACCTTTATCACAAGGCAAAAATTACTTCAACTGCTA
TATAATATGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAATTTGATTAAATTTTTTTGGGATCACCGGCATCATTTTAATCGTGTGGTTGAGAGGATTGCTCGCACTTTAGTCGCATGGCGCTTTCGACATGTAGGGAA
AGGGAAGACGAGATGGATCGAAAGTGGATCGACTTCACCAAAAACTTCAAGTTTGAGAGGTCGTTCATCTTTTTCCTTGAACGTTCAAGCATATCTTCCAAATCAAACAC
CAGAGCTGCTATGCAAATATAGAGAAGATGAGCTCGAAATTTTGAGAGGAGATGGAACAGGAAAGAGGTCAAAAAAAGAAAGAATATATGATTATGATGTCTACAATGAT
CTCGGATACGATCGTCCCATTCTTGGAGGCTCCAACGAATATCCTTATCCACGTCGAGGAAGAACGGGACGCAAACCTTTATCACAAGGCAAAAATTACTTCAACTGCTA
TATAATATGTTCTTAA
Protein sequenceShow/hide protein sequence
MSSNLIKFFWDHRHHFNRVVERIARTLVAWRFRHVGKGKTRWIESGSTSPKTSSLRGRSSFSLNVQAYLPNQTPELLCKYREDELEILRGDGTGKRSKKERIYDYDVYND
LGYDRPILGGSNEYPYPRRGRTGRKPLSQGKNYFNCYIICS