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Sed0002378 (gene) of Chayote v1 genome

Gene IDSed0002378
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:42690445..42690840
RNA-Seq ExpressionSed0002378
SyntenySed0002378
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648779.1 hypothetical protein Csa_009128 [Cucumis sativus]2.7e-2475.64Show/hide
Query:  VNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSW
        VNG+ VP IIFKGLPSTFHAFLLSIV+AFSG+FNALMLA NKP+IA+FC YYS+ FM SA+    WAVFQTV NLR W
Subjt:  VNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSW

KAG6601352.1 hypothetical protein SDJN03_06585, partial [Cucurbita argyrosperma subsp. sororia]4.4e-4671.74Show/hide
Query:  MKNTGVGNMTPETTF-------GKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNK
        MKN G  NM+PET+F       GK C S LD STNL+YCI+C SF TVT+ILL PYEQVNG+PVPT+IFKGLPSTFHAFLLS V+AFSG+FNALML+ NK
Subjt:  MKNTGVGNMTPETTF-------GKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNK

Query:  PQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSWQD
        P+IARFC YYSMAFMASA+  L WAV+QTV N R WQD
Subjt:  PQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSWQD

KHN31091.1 hypothetical protein glysoja_030742 [Glycine soja]4.5e-1949.12Show/hide
Query:  ETTFGKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASA
        E T  +T  +S+   T LL C++   F  +TI+L +PYE ++ +PVPTI+FKG P TFHAF++ I+ AFSG+ NAL +A NK + +R CGYY+MA MAS+
Subjt:  ETTFGKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASA

Query:  IASLTWAVFQTVLN
        +A L WA+  T +N
Subjt:  IASLTWAVFQTVLN

XP_022992466.1 uncharacterized protein LOC111488762 [Cucurbita maxima]3.3e-4672.46Show/hide
Query:  MKNTGVGNMTPETTF-------GKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNK
        MKN G  NM+PET+F       GK C S LD STNL+YCI+C SF TVT+ILL PYEQVNG+PVPTIIFKGLPSTFHAFLLS V+AFSG+FNALML+ NK
Subjt:  MKNTGVGNMTPETTF-------GKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNK

Query:  PQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSWQD
        P+IARFC YYSMAFMASA+  L WAV+QTV N R WQD
Subjt:  PQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSWQD

XP_040861221.1 uncharacterized protein LOC121172803 [Glycine max]2.0e-1950Show/hide
Query:  ETTFGKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASA
        E T  +T  +S+   T LL C++   F  +TI+L +PYE ++ +PVPTI+FKG P TFHAF++ I+ AFSG+ NAL +A NK + +R CGYY+MA MASA
Subjt:  ETTFGKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASA

Query:  IASLTWAVFQTVLN
        +A L WA+  T +N
Subjt:  IASLTWAVFQTVLN

TrEMBL top hitse value%identityAlignment
A0A0A0KT20 Uncharacterized protein1.0e-4069.12Show/hide
Query:  MKNTGVGNMTPETTF-------GKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNK
        MKN    N +P+T F       GKTC SSLD STNLLY I+C SF TVT+ILL PYEQVNG+ VP IIFKGLPSTFHAFLLSIV+AFSG+FNALMLA NK
Subjt:  MKNTGVGNMTPETTF-------GKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNK

Query:  PQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSW
        P+IA+FC YYS+ FM SA+    WAVFQTV NLR W
Subjt:  PQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSW

A0A5B7B2W8 Uncharacterized protein (Fragment)5.8e-2057.78Show/hide
Query:  LLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASAIASLTWA
        +L  I+  SF T  I++ +PYE ++G+PVPTIIFKGLPS FHAFL+ I+ AFSG++  LM+  +KP++A FCGY SMA MASA+A L WA
Subjt:  LLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASAIASLTWA

A0A5B7B649 Uncharacterized protein (Fragment)9.9e-2056.67Show/hide
Query:  LLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASAIASLTWA
        +L  I+  SF T  I++ +PYE ++G+PVPTIIFKGLPS FHAFL+ I+ AFSG++  LM+  +KP++A FCGY SMA MASA+A + WA
Subjt:  LLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASAIASLTWA

A0A6J1JTM5 uncharacterized protein LOC1114887621.6e-4672.46Show/hide
Query:  MKNTGVGNMTPETTF-------GKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNK
        MKN G  NM+PET+F       GK C S LD STNL+YCI+C SF TVT+ILL PYEQVNG+PVPTIIFKGLPSTFHAFLLS V+AFSG+FNALML+ NK
Subjt:  MKNTGVGNMTPETTF-------GKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNK

Query:  PQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSWQD
        P+IARFC YYSMAFMASA+  L WAV+QTV N R WQD
Subjt:  PQIARFCGYYSMAFMASAIASLTWAVFQTVLNLRSWQD

I1J684 Uncharacterized protein9.9e-2050Show/hide
Query:  ETTFGKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASA
        E T  +T  +S+   T LL C++   F  +TI+L +PYE ++ +PVPTI+FKG P TFHAF++ I+ AFSG+ NAL +A NK + +R CGYY+MA MASA
Subjt:  ETTFGKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMASA

Query:  IASLTWAVFQTVLN
        +A L WA+  T +N
Subjt:  IASLTWAVFQTVLN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACACTGGAGTTGGGAACATGACTCCAGAGACCACTTTTGGCAAGACGTGTTCAAGCAGCTTGGATTTTTCAACCAATCTCCTCTACTGTATAATGTGCTTCTC
CTTCAACACAGTTACCATAATTCTCTTGATTCCTTATGAGCAAGTGAATGGGAGCCCTGTACCTACAATAATCTTCAAGGGCCTTCCCTCAACATTTCATGCTTTTCTGC
TCTCAATTGTTTTGGCATTCTCAGGTTCATTTAATGCCTTGATGCTTGCTGGTAATAAGCCACAAATTGCCAGGTTTTGCGGCTACTATTCCATGGCGTTTATGGCCTCG
GCCATCGCTTCATTGACCTGGGCTGTGTTTCAGACAGTTTTGAACCTCAGATCATGGCAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACACTGGAGTTGGGAACATGACTCCAGAGACCACTTTTGGCAAGACGTGTTCAAGCAGCTTGGATTTTTCAACCAATCTCCTCTACTGTATAATGTGCTTCTC
CTTCAACACAGTTACCATAATTCTCTTGATTCCTTATGAGCAAGTGAATGGGAGCCCTGTACCTACAATAATCTTCAAGGGCCTTCCCTCAACATTTCATGCTTTTCTGC
TCTCAATTGTTTTGGCATTCTCAGGTTCATTTAATGCCTTGATGCTTGCTGGTAATAAGCCACAAATTGCCAGGTTTTGCGGCTACTATTCCATGGCGTTTATGGCCTCG
GCCATCGCTTCATTGACCTGGGCTGTGTTTCAGACAGTTTTGAACCTCAGATCATGGCAGGATTGA
Protein sequenceShow/hide protein sequence
MKNTGVGNMTPETTFGKTCSSSLDFSTNLLYCIMCFSFNTVTIILLIPYEQVNGSPVPTIIFKGLPSTFHAFLLSIVLAFSGSFNALMLAGNKPQIARFCGYYSMAFMAS
AIASLTWAVFQTVLNLRSWQD