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Sed0002379 (gene) of Chayote v1 genome

Gene IDSed0002379
OrganismSechium edule (Chayote v1)
DescriptionDUF4228 domain-containing protein
Genome locationLG05:43194886..43195676
RNA-Seq ExpressionSed0002379
SyntenySed0002379
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045798.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa]1.5e-2375Show/hide
Query:  EGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL
        +G +EEF+ PI ASKITSRNPNF LCNS+QMLIGS +PSL++ ++LQIGQIY LLP SLA SPLSLPDLC+FAI ASSAL
Subjt:  EGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL

KAE8651930.1 hypothetical protein Csa_006329 [Cucumis sativus]2.9e-2773.63Show/hide
Query:  NVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL
        N+DSIKV+HM +G +EEF+ PI ASKITSRNPNF LCNS+QMLIGS +PSL++ ++LQ+GQIY LLP SLA SPLSLPDLC+FAI ASSAL
Subjt:  NVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL

KAG6571421.1 hypothetical protein SDJN03_30336, partial [Cucurbita argyrosperma subsp. sororia]5.8e-2870.83Show/hide
Query:  EREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSALP
        +++ N+DSIKVIHM +G V+EF+ PI ASKITS NPN LLCNSD+M IGSR+PSL+  ++LQ+GQIY LLP SLA+SPLSLPDLC+FAI ASSALP
Subjt:  EREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSALP

XP_008457799.2 PREDICTED: uncharacterized protein LOC103497401 [Cucumis melo]9.9e-2875.82Show/hide
Query:  NVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL
        N+DSIKVIHM +G +EEF+ PI ASKITSRNPNF LCNS+QMLIGS +PSL++ ++LQIGQIY LLP SLA SPLSLPDLC+FAI ASSAL
Subjt:  NVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL

XP_022158695.1 uncharacterized protein LOC111025158 [Momordica charantia]1.5e-2360.78Show/hide
Query:  GACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASS
        G   S+ E      +IK++HM +G +EEF  PI ASKI SRNPNFLLCNS+QMLIGS +P+L+  +DLQ+GQIY L+PR  A +PLSLPDLC+ AI ASS
Subjt:  GACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASS

Query:  AL
        AL
Subjt:  AL

TrEMBL top hitse value%identityAlignment
A0A0A0LJJ9 Uncharacterized protein1.4e-2773.63Show/hide
Query:  NVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL
        N+DSIKV+HM +G +EEF+ PI ASKITSRNPNF LCNS+QMLIGS +PSL++ ++LQ+GQIY LLP SLA SPLSLPDLC+FAI ASSAL
Subjt:  NVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL

A0A1S3C6C0 uncharacterized protein LOC1034974014.8e-2875.82Show/hide
Query:  NVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL
        N+DSIKVIHM +G +EEF+ PI ASKITSRNPNF LCNS+QMLIGS +PSL++ ++LQIGQIY LLP SLA SPLSLPDLC+FAI ASSAL
Subjt:  NVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL

A0A3S3P874 Uncharacterized protein1.4e-1647.66Show/hide
Query:  MGACGSKC---EREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAI
        MG C S+    +R+    + KVIHM +G ++EF  PI A  I S+NP   LC+S+ ML+ S +P +   ++LQ+GQIY L+P   ++SPLSLPDLC  AI
Subjt:  MGACGSKC---EREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAI

Query:  AASSALP
         AS+ALP
Subjt:  AASSALP

A0A5A7TSG7 DUF4228 domain-containing protein7.2e-2475Show/hide
Query:  EGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL
        +G +EEF+ PI ASKITSRNPNF LCNS+QMLIGS +PSL++ ++LQIGQIY LLP SLA SPLSLPDLC+FAI ASSAL
Subjt:  EGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSAL

A0A6J1DWJ0 uncharacterized protein LOC1110251587.2e-2460.78Show/hide
Query:  GACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASS
        G   S+ E      +IK++HM +G +EEF  PI ASKI SRNPNFLLCNS+QMLIGS +P+L+  +DLQ+GQIY L+PR  A +PLSLPDLC+ AI ASS
Subjt:  GACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASS

Query:  AL
        AL
Subjt:  AL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21010.1 unknown protein1.0e-0627.59Show/hide
Query:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKI-------------TSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPL
        MG C S    + N      I    G + E+  P+ AS++             +SR  ++ +C+SD +     +P++ + + LQ  QIY +LP S  +S L
Subjt:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKI-------------TSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPL

Query:  SLPDLCHFAIAASSAL
        +  D+   A+ AS A+
Subjt:  SLPDLCHFAIAASSAL

AT2G23690.1 unknown protein1.3e-0933.01Show/hide
Query:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAAS
        MG C S       V + K+I + +G + EFT P+    +  +NP   +CNSD M   + + +++A ++ Q+GQ+Y  LP S     L   ++   A+ AS
Subjt:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAAS

Query:  SAL
        SAL
Subjt:  SAL

AT3G50800.1 unknown protein5.3e-1133.01Show/hide
Query:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAAS
        MGAC S+  R    ++ K+I + +G+++EF+ P+   +I  +NP   +CNSD M     + ++  ++DL+ G++Y +LP +    PL   ++   A+ AS
Subjt:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAAS

Query:  SAL
        SAL
Subjt:  SAL

AT4G37240.1 unknown protein2.0e-1033.98Show/hide
Query:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAAS
        MG C S       V + K+I +++G + EF +P+    +  + P   +CNSD M     + +++A ++LQ+GQIY  LP    R PL   ++   A+ AS
Subjt:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAAS

Query:  SAL
        SAL
Subjt:  SAL

AT5G66580.1 unknown protein1.4e-1134.95Show/hide
Query:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAAS
        MGAC S+       DS K+I + +G+++EF+ P+   +I  +NP   +CNSD+M     + ++A  ++L+ GQ+Y +LP +    PL   ++   A+ AS
Subjt:  MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAAS

Query:  SAL
        SAL
Subjt:  SAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCGTGTGGTTCAAAATGCGAAAGGGAAGGAAATGTGGATTCGATCAAGGTGATCCACATGGAGGAGGGCTCCGTCGAGGAATTCACCCACCCAATCCCAGCCTC
CAAAATCACCTCCCGGAACCCTAACTTCCTCCTCTGCAATTCCGACCAAATGCTGATCGGCAGCCGCCTCCCCTCCCTCGCCGCCGCCGATGACCTCCAGATCGGCCAAA
TCTACCTCCTCCTCCCCCGATCCCTCGCCCGCTCCCCCCTCTCCCTCCCCGATCTCTGCCACTTCGCCATTGCCGCCTCCTCTGCTCTTCCACCACCTTCTAAATCTTGA
mRNA sequenceShow/hide mRNA sequence
CAATAACAATAAAAAAAAACGAAAACCGGGGGTCTATAAGAGAGAAAGAAAGGAGGAGAGGTGAATTGAGAAAAATGGGAGCGTGTGGTTCAAAATGCGAAAGGGAAGGA
AATGTGGATTCGATCAAGGTGATCCACATGGAGGAGGGCTCCGTCGAGGAATTCACCCACCCAATCCCAGCCTCCAAAATCACCTCCCGGAACCCTAACTTCCTCCTCTG
CAATTCCGACCAAATGCTGATCGGCAGCCGCCTCCCCTCCCTCGCCGCCGCCGATGACCTCCAGATCGGCCAAATCTACCTCCTCCTCCCCCGATCCCTCGCCCGCTCCC
CCCTCTCCCTCCCCGATCTCTGCCACTTCGCCATTGCCGCCTCCTCTGCTCTTCCACCACCTTCTAAATCTTGATTTCATTTTCTGTTTTCTCTTCTTCTTCGATCTCTC
TTTTGGTTTGGTTTGGTTTTAGGGCGGATTTGACCGCCTTTTTTAGATTTGTTTGTGTTTCTGTATATGTGAAAATGAAAACGGGTTTGGGCTTCTGTTTTCCATGCTAA
ACGACAAACCACCGCCCTACTACTGTATATTATATATTCTCCAATTTTCTGCTTCTTTTGCTTATATCAATCTCTTCTTTTCTTTTTCTTTTTTTCAAAATATTCTCATT
TACAACAAATAACCTATGGTGGTGTTTGTTTCACATACTTAGCTACTTTCAGGTTAAGGAGAGTTGTATTAAATAGTTAAAAATTGAGAGTTGTACCAAAAATTCGTTTG
GATGTAGTTTATGAGGCAGTA
Protein sequenceShow/hide protein sequence
MGACGSKCEREGNVDSIKVIHMEEGSVEEFTHPIPASKITSRNPNFLLCNSDQMLIGSRLPSLAAADDLQIGQIYLLLPRSLARSPLSLPDLCHFAIAASSALPPPSKS