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Sed0002381 (gene) of Chayote v1 genome

Gene IDSed0002381
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
Genome locationLG01:18267999..18277548
RNA-Seq ExpressionSed0002381
SyntenySed0002381
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG94762.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Prunus dulcis]2.6e-1463.64Show/hide
Query:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGM-IIRYPLKGFLYSASVAG
        G GHG GTT+KG T+HQPKRWHT+TGKG+CA+MWVGDI GR  V + M IIR+P   FL+  S  G
Subjt:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGM-IIRYPLKGFLYSASVAG
KAG7024119.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Cucurbita argyrosperma subsp. argyrosperma]3.5e-1454.76Show/hide
Query:  MGGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMW-------------------------------VGDIHGRATVTMGMIIR
        MGG GHGAGTTFKG+TIHQPKRWHTVTGKGLCAVMW                                GDIHG+A VTM MI R
Subjt:  MGGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMW-------------------------------VGDIHGRATVTMGMIIR
PON60580.1 hypothetical protein PanWU01x14_151920 [Parasponia andersonii]1.4e-1577.78Show/hide
Query:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMI-IRYP
        G GHG GTT+KG+T+H PKRWH VTGKGLCA+MWVGDI GRA VTMGM  IRYP
Subjt:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMI-IRYP
RYR21292.1 hypothetical protein Ahy_B03g066583 isoform B [Arachis hypogaea]1.2e-1462.5Show/hide
Query:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMIIRYPLKGFLYSASVA
        G GHG GTT+KG+TIHQPKRWHTV GKGLCAVMWVG   GRAT+ M M++   L+     A++A
Subjt:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMIIRYPLKGFLYSASVA
RYR21293.1 hypothetical protein Ahy_B03g066583 isoform A [Arachis hypogaea]2.6e-1474Show/hide
Query:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMII
        G GHG GTT+KG+TIHQPKRWHTV GKGLCAVMWVG   GRAT+ M M++
Subjt:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMII
TrEMBL top hitse value%identityAlignment
A0A218X8E0 Uncharacterized protein1.4e-1381.4Show/hide
Query:  GGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRA
        GG GHG GTT+KG T+HQPKRWH VTGKGLCA+MWVGDI GRA
Subjt:  GGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRA
A0A2P5CHP8 Uncharacterized protein6.8e-1677.78Show/hide
Query:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMI-IRYP
        G GHG GTT+KG+T+H PKRWH VTGKGLCA+MWVGDI GRA VTMGM  IRYP
Subjt:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMI-IRYP
A0A445A4B5 Uncharacterized protein1.3e-1474Show/hide
Query:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMII
        G GHG GTT+KG+TIHQPKRWHTV GKGLCAVMWVG   GRAT+ M M++
Subjt:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMII
A0A445A4L0 Uncharacterized protein5.8e-1562.5Show/hide
Query:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMIIRYPLKGFLYSASVA
        G GHG GTT+KG+TIHQPKRWHTV GKGLCAVMWVG   GRAT+ M M++   L+     A++A
Subjt:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMIIRYPLKGFLYSASVA
A0A4Y1QSD2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 21.3e-1463.64Show/hide
Query:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGM-IIRYPLKGFLYSASVAG
        G GHG GTT+KG T+HQPKRWHT+TGKG+CA+MWVGDI GR  V + M IIR+P   FL+  S  G
Subjt:  GAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGM-IIRYPLKGFLYSASVAG
SwissProt top hitse value%identityAlignment
Q8LDK3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 23.4e-1280.56Show/hide
Query:  MGGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMW
        MGG GHG G T+KGVT+H PK WHTVTGKGLCAVMW
Subjt:  MGGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMW
Arabidopsis top hitse value%identityAlignment
AT1G76200.1 unknown protein2.4e-1380.56Show/hide
Query:  MGGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMW
        MGG GHG G T+KGVT+H PK WHTVTGKGLCAVMW
Subjt:  MGGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMW

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGCGCTGGACACGGAGCTGGTACCACGTTCAAGGGCGTCACCATTCACCAGCCTAAGCGCTGGCACACCGTCACCGGCAAGGGCTTGTGCGCCGTTATGTGGGT
TGGAGACATCCATGGGAGGGCCACGGTGACCATGGGCATGATCATTAGGTACCCTCTGAAAGGATTTTTATACTCTGCTTCAGTTGCAGGTTCCCATTTGAATGTTACGA
GTACCATATTTTCTCAGTTCTGTTCAAATAAGGATATTGTGATAGCCAATTTGACAGAAAAGACACATCACTTTATCAATTTACTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGCGCTGGACACGGAGCTGGTACCACGTTCAAGGGCGTCACCATTCACCAGCCTAAGCGCTGGCACACCGTCACCGGCAAGGGCTTGTGCGCCGTTATGTGGGT
TGGAGACATCCATGGGAGGGCCACGGTGACCATGGGCATGATCATTAGGTACCCTCTGAAAGGATTTTTATACTCTGCTTCAGTTGCAGGTTCCCATTTGAATGTTACGA
GTACCATATTTTCTCAGTTCTGTTCAAATAAGGATATTGTGATAGCCAATTTGACAGAAAAGACACATCACTTTATCAATTTACTTTTGTAA
Protein sequenceShow/hide protein sequence
MGGAGHGAGTTFKGVTIHQPKRWHTVTGKGLCAVMWVGDIHGRATVTMGMIIRYPLKGFLYSASVAGSHLNVTSTIFSQFCSNKDIVIANLTEKTHHFINLLL