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Sed0002391 (gene) of Chayote v1 genome

Gene IDSed0002391
OrganismSechium edule (Chayote v1)
Descriptionprotein SRC1
Genome locationLG12:7381457..7382355
RNA-Seq ExpressionSed0002391
SyntenySed0002391
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR039285 - Dehydrin HIRD11-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028450.1 Protein SRC1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-2171.84Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGDHDGEKGE-KKKKEKKKKGEHHHGGDGGHSSSSDS
        M+G +EKIGEKLHI GGDHKGEHH+  K EH +H+ E K   K EHH   HKEGL++KIKDKIHGDH  EKGE KKKKEKKKKGEHH   +GGHSSSSDS
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGDHDGEKGE-KKKKEKKKKGEHHHGGDGGHSSSSDS

Query:  DSD
        DSD
Subjt:  DSD

XP_008443295.1 PREDICTED: protein SRC1 [Cucumis melo]2.0e-2274.77Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG--DHDGEKGEKKKKEKKKKGEH---HHGGDGGHSS
        MSGFIEKIGEKLHI GGDHKGEHHDAHK EH  H E  K E K EHH   HKEG+I+KIKDKIHG   H  EKGEKKKKEKKKKGEH   HHGGD    S
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG--DHDGEKGEKKKKEKKKKGEH---HHGGDGGHSS

Query:  SSDSDSD
        SSDSDSD
Subjt:  SSDSDSD

XP_011652200.1 protein SRC1 [Cucumis sativus]2.0e-2275Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEH-NKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIH-GDHDGEKGEKKKKEKKKKGEHHHGGDGGHSSSSD
        MSGFIEKIGEKLHI GGDHKGEHHDAHK EH  +H +EHK +H+  H  G HKEG++DKIKDKIH GDH  EKGEKKKKEKKKKGEH H  +GG  SSSD
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEH-NKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIH-GDHDGEKGEKKKKEKKKKGEHHHGGDGGHSSSSD

Query:  SDSD
        SDSD
Subjt:  SDSD

XP_023538905.1 protein SRC1-like [Cucurbita pepo subsp. pepo]1.0e-2170.64Show/hide
Query:  MSGFIEKIGEKLHIGG---GDHKGEHHDAHKDEHNKHKEEHKGEH--KGEHHSGEHKEGLIDKIKDKIH-GDHDGEKGE-KKKKEKKKKGEHHHGGDGGH
        MSG +EKIGEKLHIGG   G+HKGEHH+  K EH K K EH+ +H  K EHH   HKEGL++KIKDKIH GDH  EKGE KKKKEKKKKGEHH   +GGH
Subjt:  MSGFIEKIGEKLHIGG---GDHKGEHHDAHKDEHNKHKEEHKGEH--KGEHHSGEHKEGLIDKIKDKIH-GDHDGEKGE-KKKKEKKKKGEHHHGGDGGH

Query:  SSSSDSDSD
        SSSSDSDSD
Subjt:  SSSSDSDSD

XP_038903205.1 protein SRC1 [Benincasa hispida]5.4e-2375.24Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGE-HKEGLIDKIKDKIHGDHD--GEKGEKKKKEKKKKGEHHHGGDGGHSSSS
        MSGFIEKIGEKLHIGG  +KGEHHD HK EH+   +EHK   K E H GE HKEGLI+KIKDKIHGDHD  GEK +K+KKEKKKKGEHHH  DGGH SSS
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGE-HKEGLIDKIKDKIHGDHD--GEKGEKKKKEKKKKGEHHHGGDGGHSSSS

Query:  DSDSD
        DSDSD
Subjt:  DSDSD

TrEMBL top hitse value%identityAlignment
A0A0B2SHK1 Uncharacterized protein1.7e-1969.52Show/hide
Query:  MSGFIEKIGEKLHIGG---GDHKGEHHDAHKDEH-NKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGD-HDGEKGEKKKKEKKKKGEHHHGGDGGHSS
        MSG I KI E LH+GG    +HKGEHH  HK EH  +H  EHKGEHKGE H GEHKEGL+DKIKDKIHGD HD  KGEKKKK+ KKK EH H    GHSS
Subjt:  MSGFIEKIGEKLHIGG---GDHKGEHHDAHKDEH-NKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGD-HDGEKGEKKKKEKKKKGEHHHGGDGGHSS

Query:  SSDSD
        SSDSD
Subjt:  SSDSD

A0A0R0FQD3 Uncharacterized protein1.7e-1969.52Show/hide
Query:  MSGFIEKIGEKLHIGG---GDHKGEHHDAHKDEH-NKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGD-HDGEKGEKKKKEKKKKGEHHHGGDGGHSS
        MSG I KI E LH+GG    +HKGEHH  HK EH  +H  EHKGEHKGE H GEHKEGL+DKIKDKIHGD HD  KGEKKKK+ KKK EH H    GHSS
Subjt:  MSGFIEKIGEKLHIGG---GDHKGEHHDAHKDEH-NKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGD-HDGEKGEKKKKEKKKKGEHHHGGDGGHSS

Query:  SSDSD
        SSDSD
Subjt:  SSDSD

A0A1S3B8E4 protein SRC19.9e-2374.77Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG--DHDGEKGEKKKKEKKKKGEH---HHGGDGGHSS
        MSGFIEKIGEKLHI GGDHKGEHHDAHK EH  H E  K E K EHH   HKEG+I+KIKDKIHG   H  EKGEKKKKEKKKKGEH   HHGGD    S
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG--DHDGEKGEKKKKEKKKKGEH---HHGGDGGHSS

Query:  SSDSDSD
        SSDSDSD
Subjt:  SSDSDSD

A0A5A7UF86 Zinc transporter ZIP69.9e-2374.77Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG--DHDGEKGEKKKKEKKKKGEH---HHGGDGGHSS
        MSGFIEKIGEKLHI GGDHKGEHHDAHK EH  H E  K E K EHH   HKEG+I+KIKDKIHG   H  EKGEKKKKEKKKKGEH   HHGGD    S
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG--DHDGEKGEKKKKEKKKKGEH---HHGGDGGHSS

Query:  SSDSDSD
        SSDSDSD
Subjt:  SSDSDSD

A0A6J1FQD3 protein SRC1-like3.5e-2070.87Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGDHDGEKGE-KKKKEKKKKGEHHHGGDGGHSSSSDS
        M+G +EKIGEKLHI GGDHKGEH   H  E +KH+ E K   K EHH   HKEGL++KIKDKIHGDH  EKGE KKKKEKKKKGEHH   +GGHSSSSDS
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGDHDGEKGE-KKKKEKKKKGEHHHGGDGGHSSSSDS

Query:  DSD
        DSD
Subjt:  DSD

SwissProt top hitse value%identityAlignment
O04132 Protein SRC14.7e-2269.52Show/hide
Query:  MSGFIEKIGEKLHIGG---GDHKGEHHDAHKDEH-NKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGD-HDGEKGEKKKKEKKKKGEHHHGGDGGHSS
        MSG I KI E LH+GG    +HKGEHH  HK EH  +H  EHKGEHKGE H GEHKEGL+DKIKDKIHGD HD  KGEKKKK+ KKK EH H    GHSS
Subjt:  MSGFIEKIGEKLHIGG---GDHKGEHHDAHKDEH-NKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGD-HDGEKGEKKKKEKKKKGEHHHGGDGGHSS

Query:  SSDSD
        SSDSD
Subjt:  SSDSD

Q9SLJ2 Dehydrin HIRD111.3e-1659.09Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG----DHDGE----KGEKKKKEKKKKGEHHHGGDGG
        M+G I KIG+ LHIGGG+ +GEH         K +EEHK +H  EH SGEHKEG++DKIKDKIHG     HDGE     GEKKKK+ KK+ +HH   DG 
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG----DHDGE----KGEKKKKEKKKKGEHHHGGDGG

Query:  HSSSSDSDSD
        HSSSSDSDSD
Subjt:  HSSSSDSDSD

Arabidopsis top hitse value%identityAlignment
AT1G54410.1 dehydrin family protein9.5e-1859.09Show/hide
Query:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG----DHDGE----KGEKKKKEKKKKGEHHHGGDGG
        M+G I KIG+ LHIGGG+ +GEH         K +EEHK +H  EH SGEHKEG++DKIKDKIHG     HDGE     GEKKKK+ KK+ +HH   DG 
Subjt:  MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHG----DHDGE----KGEKKKKEKKKKGEHHHGGDGG

Query:  HSSSSDSDSD
        HSSSSDSDSD
Subjt:  HSSSSDSDSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGATTCATCGAGAAAATCGGAGAGAAGCTCCACATCGGAGGCGGAGATCACAAGGGCGAGCACCACGACGCGCACAAGGACGAGCACAACAAGCACAAGGAAGA
GCACAAGGGCGAGCACAAAGGCGAGCACCACAGCGGAGAGCACAAGGAAGGCCTGATCGACAAGATCAAGGACAAGATCCACGGAGACCACGACGGCGAGAAGGGCGAGA
AGAAGAAGAAGGAGAAGAAGAAGAAAGGCGAGCACCACCACGGCGGCGACGGCGGCCACAGCAGCAGCAGCGACAGCGACAGCGACAGCGACTGA
mRNA sequenceShow/hide mRNA sequence
ACCAATGTTGCCCAAAGCATTACTCTGGTTTGAACATATGAATCAATTAAAATAAAAAAAAACTAACAACACAAATGTAATTTTTAAAAAAGAAATGGAATAAAAAAACA
AAAATAGGTCTTGAAAATGAAATTTGAGGTTAATTAATTAATTTATTTATTTTTGTCGTGGAGGGTACATTTGGGGATCTATAAATTAGGGCACAATTAGCTTCCCCCTT
TCATCCCAATCAAAGAAGTTGATCGAAAAGCTCAGATCCAAACAAACGAAATGTCAGGATTCATCGAGAAAATCGGAGAGAAGCTCCACATCGGAGGCGGAGATCACAAG
GGCGAGCACCACGACGCGCACAAGGACGAGCACAACAAGCACAAGGAAGAGCACAAGGGCGAGCACAAAGGCGAGCACCACAGCGGAGAGCACAAGGAAGGCCTGATCGA
CAAGATCAAGGACAAGATCCACGGAGACCACGACGGCGAGAAGGGCGAGAAGAAGAAGAAGGAGAAGAAGAAGAAAGGCGAGCACCACCACGGCGGCGACGGCGGCCACA
GCAGCAGCAGCGACAGCGACAGCGACAGCGACTGATCCCCGATCTCCAGATCTGGAACTGTCATCCAATAAACTTGTTGTTTTCACCCTATAATGTAATCTCTCTGTTTC
TCTTTAATCCGCTGTGGTGTTTTAATAAGAACGCTTATTATGTTCCTCATTTTCGTTTCATCTGATATTTCATTTTATTTTTTTCAAGAAAATTAAGTCAGCACAGAATA
TATGTACCGCTTCCTTTGAGACTTCTCCTGGTTCGGAGATAAGAAATTAGAAATTTTTCTGAGGGATCGATTTAGTTATGATAGATGAGATTTATGATAAATCATTAATA
AATGGTGGATTATTATAAA
Protein sequenceShow/hide protein sequence
MSGFIEKIGEKLHIGGGDHKGEHHDAHKDEHNKHKEEHKGEHKGEHHSGEHKEGLIDKIKDKIHGDHDGEKGEKKKKEKKKKGEHHHGGDGGHSSSSDSDSDSD