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Sed0002402 (gene) of Chayote v1 genome

Gene IDSed0002402
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:9897469..9898022
RNA-Seq ExpressionSed0002402
SyntenySed0002402
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570356.1 hypothetical protein SDJN03_29271, partial [Cucurbita argyrosperma subsp. sororia]2.9e-4781.6Show/hide
Query:  MARNYYYYYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVAL
        MAR YYYY+RYPYLEYLTLPP QLCVF   LL VMAFSWY+FYDS +E+++FQLKL+LL VPLLLLLLLHLLSLGLPFLVP PEQ SLHRA  SPWGVA+
Subjt:  MARNYYYYYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVAL

Query:  LLVFLLYIISNQSHYHQRWFPFGYR
        LLVFLLY+IS+QSHYH+RWFPFGYR
Subjt:  LLVFLLYIISNQSHYHQRWFPFGYR

TYI48534.1 hypothetical protein E1A91_D13G255500v1 [Gossypium mustelinum]8.7e-2857.76Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YYR  Y++YL+LPP  LC F   L  V+ FSWY+ Y+S++E+ M QLK +L++ P++LLLLLH  S  +P L+P PE++SLHRA  SPWGVAL+LV LLY
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFPFG
        +IS QS +H+RWFPFG
Subjt:  IISNQSHYHQRWFPFG

XP_007014761.1 PREDICTED: uncharacterized protein LOC18589643 [Theobroma cacao]3.9e-2857.76Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YYR  +L+YL+LPP  LC F   L  V+ FSWY+ Y+S+ E+ + QLK +L++ P++LLLL+H  S  +PFL+P PEQ+SLHR   SPWGVALLLVFLLY
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFPFG
        +IS QS +H+RWFP G
Subjt:  IISNQSHYHQRWFPFG

XP_012462541.1 PREDICTED: uncharacterized protein LOC105782384 [Gossypium raimondii]3.9e-2857.76Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YYR  Y++YL+LPP  LC F   L  V+ FSWY+ Y+S++E+ M QLK +L++ P++LLLLLH  S  +P L+P PE++SLHRA  SPWGVAL+LV LLY
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFPFG
        +IS QS++H+RWFPFG
Subjt:  IISNQSHYHQRWFPFG

XP_022756288.1 uncharacterized protein LOC111304026 [Durio zibethinus]1.8e-2858.77Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YYRY +L+YL+ PP  LC+F   L  V+ FSWY+ Y+S+ E+ + QLK +L++ PL+LL+L+H LS  +PFL+P PEQ+SLHRA  SPWGVAL+LVFLLY
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFP
        +IS QS +H+RWFP
Subjt:  IISNQSHYHQRWFP

TrEMBL top hitse value%identityAlignment
A0A061GR99 Uncharacterized protein1.9e-2857.76Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YYR  +L+YL+LPP  LC F   L  V+ FSWY+ Y+S+ E+ + QLK +L++ P++LLLL+H  S  +PFL+P PEQ+SLHR   SPWGVALLLVFLLY
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFPFG
        +IS QS +H+RWFP G
Subjt:  IISNQSHYHQRWFPFG

A0A0A0KZ55 Uncharacterized protein1.4e-4478.4Show/hide
Query:  MARNYYYYYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVAL
        MAR Y YYYRYPYLEYLTLPP QLCVF V LL VMAFSWY FY S +E+ +FQLKL+LL VPLLLLLLLHLLS G  FL+P PEQ+SLHRA  SPWGVA+
Subjt:  MARNYYYYYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVAL

Query:  LLVFLLYIISNQSHYHQRWFPFGYR
        LLVF LY+IS+QSHYHQRWFPFGYR
Subjt:  LLVFLLYIISNQSHYHQRWFPFGYR

A0A5D2I236 Uncharacterized protein1.9e-2857.76Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YYR  Y++YL+LPP  LC F   L  V+ FSWY+ Y+S++E+ M QLK +L++ P++LLLLLH  S  +P L+P PE++SLHRA  SPWGVAL+LV LLY
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFPFG
        +IS QS++H+RWFPFG
Subjt:  IISNQSHYHQRWFPFG

A0A5J5NVD3 Uncharacterized protein1.9e-2857.76Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YYR  Y++YL+LPP  LC F   L  V+ FSWY+ Y+S++E+ M QLK +L++ P++LLLLLH  S  +P L+P PE++SLHRA  SPWGVAL+LV LLY
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFPFG
        +IS QS++H+RWFPFG
Subjt:  IISNQSHYHQRWFPFG

A0A6P5ZU06 uncharacterized protein LOC1113040268.5e-2958.77Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YYRY +L+YL+ PP  LC+F   L  V+ FSWY+ Y+S+ E+ + QLK +L++ PL+LL+L+H LS  +PFL+P PEQ+SLHRA  SPWGVAL+LVFLLY
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFP
        +IS QS +H+RWFP
Subjt:  IISNQSHYHQRWFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31940.1 unknown protein2.5e-1746.73Show/hide
Query:  PFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLS----LG--LPFLVPFPEQESLHRASASPWGVALLLVFLLYIISNQSH
        P  LCVF + LL  +  SWY  Y+ +IE   +Q KL L+  PLLLLL +H LS    +G  +  L+   E+ESL+RA  +PWGVA +LVFL +++S QS 
Subjt:  PFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLS----LG--LPFLVPFPEQESLHRASASPWGVALLLVFLLYIISNQSH

Query:  YHQRWFP
        + +RWFP
Subjt:  YHQRWFP

AT5G19875.1 unknown protein1.8e-2650.86Show/hide
Query:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY
        YY   YL+YL+LP   LC   + +  V++F+WY+ ++SIIE+ +  LKL  +  PL LLLL+H  S GL F VP+PEQ+S+HRA +SPWGVA +LV +L+
Subjt:  YYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLY

Query:  IISNQSHYHQRWFPFG
        ++S QS + +RWFPFG
Subjt:  IISNQSHYHQRWFPFG

AT5G42146.1 unknown protein1.0e-0530.56Show/hide
Query:  PPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLL------HLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLYIISNQS
        PP  L      +  ++  S Y  Y   +E+    LKL++L +P+L + +L      H L     + V   + +SL      PWGV L+L+ LL ++S QS
Subjt:  PPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLL------HLLSLGLPFLVPFPEQESLHRASASPWGVALLLVFLLYIISNQS

Query:  HYHQRWFP
        ++H  W+P
Subjt:  HYHQRWFP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGACAAAAACATATTCTCCTTTTCCTTTATAAATAGAAATATGGCAGCAAAACAAAACAAAACAACTACACATAAATTTAGGTTAAACCCTGTGAAAAGTGGTGA
AAAAATGGCAAGAAACTACTACTACTACTACCGTTACCCTTACTTGGAGTACTTGACTTTGCCTCCATTCCAGCTCTGCGTGTTCTGCGTAACCCTGCTTACGGTGATGG
CGTTTTCGTGGTACGTTTTCTACGACTCCATTATTGAAGAATTGATGTTCCAACTCAAGCTCTACCTTCTCATGGTGCCGCTGCTTCTACTTCTCCTCCTACACCTGCTC
TCGCTCGGCCTCCCGTTTCTCGTCCCTTTCCCGGAGCAGGAATCCCTCCACCGTGCCAGTGCCTCCCCGTGGGGCGTCGCTCTGCTCCTCGTGTTCCTTCTCTATATAAT
CTCCAACCAGTCTCATTACCACCAACGCTGGTTCCCTTTTGGATATAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
CTCAACAATACTATGGTAGACAAAAACATATTCTCCTTTTCCTTTATAAATAGAAATATGGCAGCAAAACAAAACAAAACAACTACACATAAATTTAGGTTAAACCCTGT
GAAAAGTGGTGAAAAAATGGCAAGAAACTACTACTACTACTACCGTTACCCTTACTTGGAGTACTTGACTTTGCCTCCATTCCAGCTCTGCGTGTTCTGCGTAACCCTGC
TTACGGTGATGGCGTTTTCGTGGTACGTTTTCTACGACTCCATTATTGAAGAATTGATGTTCCAACTCAAGCTCTACCTTCTCATGGTGCCGCTGCTTCTACTTCTCCTC
CTACACCTGCTCTCGCTCGGCCTCCCGTTTCTCGTCCCTTTCCCGGAGCAGGAATCCCTCCACCGTGCCAGTGCCTCCCCGTGGGGCGTCGCTCTGCTCCTCGTGTTCCT
TCTCTATATAATCTCCAACCAGTCTCATTACCACCAACGCTGGTTCCCTTTTGGATATAGAAGATGAAACCACAACCATCAATCTTCATATTTACTTTTTTATTAATTCT
CTAC
Protein sequenceShow/hide protein sequence
MVDKNIFSFSFINRNMAAKQNKTTTHKFRLNPVKSGEKMARNYYYYYRYPYLEYLTLPPFQLCVFCVTLLTVMAFSWYVFYDSIIEELMFQLKLYLLMVPLLLLLLLHLL
SLGLPFLVPFPEQESLHRASASPWGVALLLVFLLYIISNQSHYHQRWFPFGYRR