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Sed0002404 (gene) of Chayote v1 genome

Gene IDSed0002404
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF 3339)
Genome locationLG12:34610381..34610593
RNA-Seq ExpressionSed0002404
SyntenySed0002404
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR021775 - Protein of unknown function DUF3339


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RRT80049.1 hypothetical protein B296_00004232 [Ensete ventricosum]3.9e-2587.14Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPV++AVVLFV+LSPGLLFQIPGKGG++VEFGNLQTSG SILVHAVIYF LITI LIAVGVH+YTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

RWV99467.1 hypothetical protein GW17_00037624, partial [Ensete ventricosum]3.9e-2587.14Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPV++AVVLFV+LSPGLLFQIPGKGG++VEFGNLQTSG SILVHAVIYF LITI LIAVGVH+YTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

XP_004503745.1 uncharacterized protein LOC101508777 [Cicer arietinum]1.9e-2488.57Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPVIIAVVLFV+LSPGLLFQIPG+ G+V+EFGN+QTSGASILVHA+IYFGLITILLIA+GVHIYTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

XP_009379975.1 PREDICTED: uncharacterized protein LOC103968468 [Musa acuminata subsp. malaccensis]1.1e-2485.71Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPV++AVVLFV+LSPGLLFQIPGKGG++VEFGN QTSG SILVHAVIYF LITI LIAVGVH+YTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

XP_013446994.1 uncharacterized protein LOC25502017 [Medicago truncatula]6.6e-2591.43Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPVIIAVVLFV+LSPGLLFQIPG+ GKV+EFGN+QTSGASILVHA+IYFGLITILLIAVGVHIYTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

TrEMBL top hitse value%identityAlignment
A0A072TV19 Transmembrane protein, putative3.2e-2591.43Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPVIIAVVLFV+LSPGLLFQIPG+ GKV+EFGN+QTSGASILVHA+IYFGLITILLIAVGVHIYTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

A0A1S2YFK1 uncharacterized protein LOC1015087779.3e-2588.57Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPVIIAVVLFV+LSPGLLFQIPG+ G+V+EFGN+QTSGASILVHA+IYFGLITILLIA+GVHIYTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

A0A427AUU6 Uncharacterized protein1.9e-2587.14Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPV++AVVLFV+LSPGLLFQIPGKGG++VEFGNLQTSG SILVHAVIYF LITI LIAVGVH+YTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

A0A444DMX7 Uncharacterized protein (Fragment)1.9e-2587.14Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPV++AVVLFV+LSPGLLFQIPGKGG++VEFGNLQTSG SILVHAVIYF LITI LIAVGVH+YTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

M0RIX4 Uncharacterized protein5.4e-2585.71Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPV++AVVLFV+LSPGLLFQIPGKGG++VEFGN QTSG SILVHAVIYF LITI LIAVGVH+YTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01940.1 Protein of unknown function (DUF 3339)2.2e-1865.67Show/hide
Query:  ADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIY
        ADWGPV +AVVLFVVLSPGLLFQ+P +  +V+E GN+ TSG SILVHA+++F +ITIL+IA+ +HI+
Subjt:  ADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIY

AT3G48660.1 Protein of unknown function (DUF 3339)5.9e-2474.29Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPV++AV+LFV+L+PGLLFQIP + G+VVEFGN+QTSGASILVH +I+FGLITI  IA+ +HIYTG
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

AT5G08391.1 Protein of unknown function (DUF 3339)9.8e-1957.14Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        M+DWGPV++ V+LFV+L+PGLLFQ+PG+  K VEFGN QTS  S++VH+++YF L+ + L+A+ +HIY G
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG

AT5G40980.1 Protein of unknown function (DUF 3339)2.6e-1965.67Show/hide
Query:  ADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIY
        ADWGPVI+AV LF++LSPGLLFQ+P +  +V+EFGN+ TSG SILVHA+IYF ++TIL+IA+ +HI+
Subjt:  ADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIY

AT5G63500.1 Protein of unknown function (DUF 3339)1.4e-2581.43Show/hide
Query:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG
        MADWGPV+IAV+LFVVLSPGLLFQIP  GG+VVEFGN+QTSGASILVHA+I+FGLITI  IA+ VHIY+G
Subjt:  MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATTGGGGGCCGGTGATTATAGCGGTGGTTCTGTTCGTGGTGCTGAGTCCGGGGCTGCTGTTTCAGATCCCCGGCAAAGGGGGCAAAGTGGTGGAGTTCGGGAA
CCTGCAGACCAGTGGGGCTTCCATACTTGTGCACGCCGTCATCTACTTCGGCCTCATCACCATCTTACTTATTGCCGTCGGTGTTCACATCTACACCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATTGGGGGCCGGTGATTATAGCGGTGGTTCTGTTCGTGGTGCTGAGTCCGGGGCTGCTGTTTCAGATCCCCGGCAAAGGGGGCAAAGTGGTGGAGTTCGGGAA
CCTGCAGACCAGTGGGGCTTCCATACTTGTGCACGCCGTCATCTACTTCGGCCTCATCACCATCTTACTTATTGCCGTCGGTGTTCACATCTACACCGGCTAA
Protein sequenceShow/hide protein sequence
MADWGPVIIAVVLFVVLSPGLLFQIPGKGGKVVEFGNLQTSGASILVHAVIYFGLITILLIAVGVHIYTG