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Sed0002409 (gene) of Chayote v1 genome

Gene IDSed0002409
OrganismSechium edule (Chayote v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Genome locationLG05:4026817..4031096
RNA-Seq ExpressionSed0002409
SyntenySed0002409
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR007763 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143640.2 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus]1.0e-8996.84Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGILKSIKDKGIGTFWR+LKE+GYLKCLPDGNLLQTKIHN+GATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

XP_008467243.1 PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis melo]5.5e-8894.94Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGILKSIKDKGIGTFWR+LKE+GYLKCL DGNLLQTKIHN+GATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

XP_022958111.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata]2.5e-8894.94Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGI+KSIKDKGIGTFWR+LKE+GYLKCLPDGNLLQTKIHN+GATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

XP_022996140.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita maxima]1.2e-8794.3Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGI+KSIKDKGIGTFWR+LKE+GYLKCLPDGNLLQTKIH +GATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

XP_038875755.1 probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Benincasa hispida]6.6e-8995.57Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGILKSIKDKGIGTFWR+LKE+GYLKCLPDGNLLQTKIHN+GATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

TrEMBL top hitse value%identityAlignment
A0A0A0KNC9 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 124.9e-9096.84Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGILKSIKDKGIGTFWR+LKE+GYLKCLPDGNLLQTKIHN+GATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

A0A1S3CUD4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.7e-8894.94Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGILKSIKDKGIGTFWR+LKE+GYLKCL DGNLLQTKIHN+GATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

A0A5A7ULJ6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.7e-8894.94Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGILKSIKDKGIGTFWR+LKE+GYLKCL DGNLLQTKIHN+GATLVGVDKFGNKYYQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

A0A6J1H155 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.2e-8894.94Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGI+KSIKDKGIGTFWR+LKE+GYLKCLPDGNLLQTKIHN+GATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

A0A6J1K5W7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 126.0e-8894.3Show/hide
Query:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI
        MA+VVRGI+KSIKDKGIGTFWR+LKE+GYLKCLPDGNLLQTKIH +GATLVGVDKFGNKYYQK+DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+I
Subjt:  MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHI

Query:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA
        TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK+
Subjt:  TDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA

SwissProt top hitse value%identityAlignment
Q0MQ85 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 121.5e-1141.49Show/hide
Query:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS
        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH ITD       +         HK N +G  E+ + +S
Subjt:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS

Q0MQ86 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.6e-1140.43Show/hide
Query:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS
        TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +TD       +         HK N +G  E+ + +S
Subjt:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEELIYHS

Q54MV7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.1e-1344.87Show/hide
Query:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSG
        TLVGVDK GN+YY+  + +  YGRHRWVEY +    + + +PPE+H W+HH++D    E+L   P+ Y   H  N +G
Subjt:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSG

Q9M9M9 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 122.2e-7176.13Show/hide
Query:  TVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        TV +  L++I++KG+G F R ++E+G+++CLPDGNLLQTKIHN+GATLVGVDKFGNKYYQK+  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  TVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK

Q9N2W7 Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 125.5e-1443.75Show/hide
Query:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHHITDHTGDELLMLKP---SRYGIEHKENFSGEGEELIYHSKGHALNPG
        TLVG D FGN+YY+  +      R+RWVE+ +K    Y+A+QVPPEWH WLHHIT    D+   +KP     + +EHKEN S      IY  K +   P 
Subjt:  TLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKG--RYNASQVPPEWHGWLHHITDHTGDELLMLKP---SRYGIEHKENFSGEGEELIYHSKGHALNPG

Query:  QRDWTRYQSWQP
            T+ Q WQP
Subjt:  QRDWTRYQSWQP

Arabidopsis top hitse value%identityAlignment
AT3G03100.1 NADH:ubiquinone oxidoreductase, 17.2kDa subunit1.6e-7276.13Show/hide
Query:  TVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        TV +  L++I++KG+G F R ++E+G+++CLPDGNLLQTKIHN+GATLVGVDKFGNKYYQK+  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  TVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK

AT3G03100.2 NADH:ubiquinone oxidoreductase, 17.2kDa subunit7.8e-7275.48Show/hide
Query:  TVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD
        TV +  L++I++KG+G F R ++E+G+++CLPDGNLLQTKIHN+GATLVGVDKFGNKYYQK+  +TQYG HRWVEYA K RYNASQVP EWHGWLH ITD
Subjt:  TVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITD

Query:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK
        HTGDELL LKP RYG+EHKENFSGEG+  IYHSKGH LNPGQ++WTRYQSW PTK
Subjt:  HTGDELLMLKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGTGGTGCGGGGGATTCTGAAATCAATCAAAGACAAAGGGATCGGAACTTTCTGGAGAGATCTCAAAGAAGATGGCTACTTGAAATGCTTACCCGATGGAAA
CCTATTGCAAACCAAAATCCATAACATGGGTGCGACACTTGTCGGTGTTGATAAGTTTGGCAATAAATATTACCAGAAGGTCGATGAAGAGACTCAATATGGAAGGCACA
GGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCAGAATGGCATGGCTGGCTCCACCACATAACTGACCACACAGGAGACGAGCTTCTGATG
CTGAAACCCAGCAGGTATGGAATAGAACATAAGGAAAACTTCTCCGGGGAAGGCGAAGAATTAATATACCATTCGAAAGGACATGCTCTTAATCCTGGACAGAGAGATTG
GACTCGATACCAGTCATGGCAACCAACCAAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
GTGAAAATACATCTGCATTCGATTTGGGAAGCAGAGAAATGGCGACGGTGGTGCGGGGGATTCTGAAATCAATCAAAGACAAAGGGATCGGAACTTTCTGGAGAGATCTC
AAAGAAGATGGCTACTTGAAATGCTTACCCGATGGAAACCTATTGCAAACCAAAATCCATAACATGGGTGCGACACTTGTCGGTGTTGATAAGTTTGGCAATAAATATTA
CCAGAAGGTCGATGAAGAGACTCAATATGGAAGGCACAGGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCAGAATGGCATGGCTGGCTCC
ACCACATAACTGACCACACAGGAGACGAGCTTCTGATGCTGAAACCCAGCAGGTATGGAATAGAACATAAGGAAAACTTCTCCGGGGAAGGCGAAGAATTAATATACCAT
TCGAAAGGACATGCTCTTAATCCTGGACAGAGAGATTGGACTCGATACCAGTCATGGCAACCAACCAAGGCTTAAGTAATTTTGTCTATCAATCCCTTTCTCCAATTTGG
AGATCCTTGGGATATATATATTTGGTTTTGTTTCTTCTGAATAAGTGATTTGTTATCCATGTAAGCTGGGAATTATTTGTCATGTTTTGCTGCACAAAGCATATGAGGAA
TTTAAAGCATGTTTCTGGTTTTCAAAATCTTAACAAATTCATTTTTGTGCCTGC
Protein sequenceShow/hide protein sequence
MATVVRGILKSIKDKGIGTFWRDLKEDGYLKCLPDGNLLQTKIHNMGATLVGVDKFGNKYYQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLM
LKPSRYGIEHKENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKA