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Sed0002411 (gene) of Chayote v1 genome

Gene IDSed0002411
OrganismSechium edule (Chayote v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationLG01:8428041..8433468
RNA-Seq ExpressionSed0002411
SyntenySed0002411
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583402.1 hypothetical protein SDJN03_19334, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5180.74Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF
        GKSKG QASSFVADLFDVKE   +SSS VFAAIFP PQKGGGRNSSSSGDWLKQ NGNQP + +QGNSGGSLEPCHLSSSLYYGGQDGYSQ+PSA     
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF

Query:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGNNEMD
        P PTLKK+GGEDDPNGNN Q ASRGNWWQG ++ D
Subjt:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGNNEMD

XP_008457434.1 PREDICTED: uncharacterized protein LOC103497123 [Cucumis melo]3.1e-4979.85Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF
        GKSKG Q SSFVADLFDVKE+ LSS+SG FA IFP PQKG GRNSSSS DWLKQTNGNQP +T+QGNSGGSLEPCHLSSSLYYGGQDGYSQ+PSA     
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF

Query:  PPP--TLKKTGG-EDDPNGNNSQTASRGNWWQGN
        PPP  T+KK+GG +DDPNGNNSQ ASRGNWWQG+
Subjt:  PPP--TLKKTGG-EDDPNGNNSQTASRGNWWQGN

XP_022964980.1 uncharacterized protein LOC111464929 [Cucurbita moschata]7.4e-5182.44Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF
        GKSKG QASSFVADLFDVKE   +SSS VFAAIFP PQKGGGRNSSSSGDWLKQ NGNQP + +QGNSGGSLEPCHLSSSLYYGGQDGYSQ+PSA     
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF

Query:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGN
        P PTLKK+GGEDDPNGNN Q ASRGNWWQG+
Subjt:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGN

XP_022970583.1 uncharacterized protein LOC111469517 [Cucurbita maxima]7.4e-5182.44Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF
        GKSKG QASSFVADLFDVKE   +SSS VFAAIFP PQKGGGRNSSSSGDWLKQ NGNQP + +QGNSGGSLEPCHLSSSLYYGGQDGYSQ+PSA     
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF

Query:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGN
        P PTLKK+GGEDDPNGNN Q ASRGNWWQG+
Subjt:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGN

XP_038894691.1 uncharacterized protein LOC120083160 [Benincasa hispida]1.1e-5184.73Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFP-
        GKSKG QASSFVADLFDVKE  LSS+SGVFAAIF  PQKG GRNSSSSGDWLKQTNGNQPR+T+QGNS GSLEPCHLSSSLYYGGQDGYSQ+PSA   P 
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFP-

Query:  -PPTLKKTGGEDDPNGNNSQTASRGNWWQGN
         PPT+KK+GGEDDPNGNNSQ ASRGNWWQG+
Subjt:  -PPTLKKTGGEDDPNGNNSQTASRGNWWQGN

TrEMBL top hitse value%identityAlignment
A0A1S3C5M6 uncharacterized protein LOC1034971231.5e-4979.85Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF
        GKSKG Q SSFVADLFDVKE+ LSS+SG FA IFP PQKG GRNSSSS DWLKQTNGNQP +T+QGNSGGSLEPCHLSSSLYYGGQDGYSQ+PSA     
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF

Query:  PPP--TLKKTGG-EDDPNGNNSQTASRGNWWQGN
        PPP  T+KK+GG +DDPNGNNSQ ASRGNWWQG+
Subjt:  PPP--TLKKTGG-EDDPNGNNSQTASRGNWWQGN

A0A5D3BEB7 Uncharacterized protein1.5e-4979.85Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF
        GKSKG Q SSFVADLFDVKE+ LSS+SG FA IFP PQKG GRNSSSS DWLKQTNGNQP +T+QGNSGGSLEPCHLSSSLYYGGQDGYSQ+PSA     
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF

Query:  PPP--TLKKTGG-EDDPNGNNSQTASRGNWWQGN
        PPP  T+KK+GG +DDPNGNNSQ ASRGNWWQG+
Subjt:  PPP--TLKKTGG-EDDPNGNNSQTASRGNWWQGN

A0A6J1GAG9 uncharacterized protein LOC111452257 isoform X15.7e-4980.15Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFPP
        GKS G Q SSFVADLFDV+ES LSS+SGV AA+FP PQK G R +SSSGDWLKQTNGNQPR+TKQGNSGGSLEPCHLSSSLYYGGQDGY ++PS    PP
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFPP

Query:  P--TLKKTGGEDDPNGNNSQTASRGNWWQGN
        P  TLKK+GGEDDPNGNNSQ ASRGNWWQG+
Subjt:  P--TLKKTGGEDDPNGNNSQTASRGNWWQGN

A0A6J1HJ44 uncharacterized protein LOC1114649293.6e-5182.44Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF
        GKSKG QASSFVADLFDVKE   +SSS VFAAIFP PQKGGGRNSSSSGDWLKQ NGNQP + +QGNSGGSLEPCHLSSSLYYGGQDGYSQ+PSA     
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF

Query:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGN
        P PTLKK+GGEDDPNGNN Q ASRGNWWQG+
Subjt:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGN

A0A6J1I4B7 uncharacterized protein LOC1114695173.6e-5182.44Show/hide
Query:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF
        GKSKG QASSFVADLFDVKE   +SSS VFAAIFP PQKGGGRNSSSSGDWLKQ NGNQP + +QGNSGGSLEPCHLSSSLYYGGQDGYSQ+PSA     
Subjt:  GKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSA--ESF

Query:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGN
        P PTLKK+GGEDDPNGNN Q ASRGNWWQG+
Subjt:  PPPTLKKTGGEDDPNGNNSQTASRGNWWQGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein6.7e-1038.21Show/hide
Query:  VKESSLSSSSGVFAAIFPYPQ--KGGGRNSSSSGDWLKQTNGNQP---------RYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFPPPTLKKT
        V  S  SS++G+F +IFP P     G   S +     + TN   P         +  K   S  +  PC+LSSS+YYGGQD YS S +     P   KK 
Subjt:  VKESSLSSSSGVFAAIFPYPQ--KGGGRNSSSSGDWLKQTNGNQP---------RYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFPPPTLKKT

Query:  GGEDDPNGNNSQTASRGNWWQGN
        G E D     S++ASRGNWW+G+
Subjt:  GGEDDPNGNNSQTASRGNWWQGN

AT3G55646.1 unknown protein3.0e-1040.5Show/hide
Query:  VKESSLSSSSGVFAAIFPYP---QKGGGRNSSSSGDWLKQTNGN------QPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFPPPTLKKTGG
        V  SS SS++G+F +IFP P   Q G   + +S G  +K  + N        +  K   +  +  PCHLSSSLYYGGQ+ YS   S  +    T KK G 
Subjt:  VKESSLSSSSGVFAAIFPYP---QKGGGRNSSSSGDWLKQTNGN------QPRYTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFPPPTLKKTGG

Query:  EDDPNGNNSQTASRGNWWQGN
        E D     S+ ASRGNWW+G+
Subjt:  EDDPNGNNSQTASRGNWWQGN

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).1.8e-1543.48Show/hide
Query:  ASSFVADLFDVKES-SLSSSSGVFAAIFPYPQKGGGRNS-----SSSGDW---LKQTNGNQPRYTKQGNSGGS-------LEPCHLSSSLYYGGQDGYSQ
        +SS  ++LF  +E+ S  SSSG+  +IFP P K  GR S      + G W     +T GN  R  +Q  + GS       ++PCHLSSS+YYGG D Y Q
Subjt:  ASSFVADLFDVKES-SLSSSSGVFAAIFPYPQKGGGRNS-----SSSGDW---LKQTNGNQPRYTKQGNSGGS-------LEPCHLSSSLYYGGQDGYSQ

Query:  SPSAESFPPPTLKKTGGEDDPNGNNSQTASRGNWWQGN
          ++ S    T KK GGEDD     S +ASRGNWWQG+
Subjt:  SPSAESFPPPTLKKTGGEDDPNGNNSQTASRGNWWQGN

AT5G02020.2 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).6.3e-0839.62Show/hide
Query:  ASSFVADLFDVKES-SLSSSSGVFAAIFPYPQKGGGRNS-----SSSGDW---LKQTNGNQPRYTKQGNSGGS-------LEPCHLSSSLYYGGQDGYSQ
        +SS  ++LF  +E+ S  SSSG+  +IFP P K  GR S      + G W     +T GN  R  +Q  + GS       ++PCHLSSS+YYGG D Y Q
Subjt:  ASSFVADLFDVKES-SLSSSSGVFAAIFPYPQKGGGRNS-----SSSGDW---LKQTNGNQPRYTKQGNSGGS-------LEPCHLSSSLYYGGQDGYSQ

Query:  SPSAES
          ++ S
Subjt:  SPSAES

AT5G59080.1 unknown protein1.5e-2246.92Show/hide
Query:  SKGNQASSFVADLFDVKE-SSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNS-GGSLEPCHLSSSLYYGGQDGYSQSPSAESFPP
        S  + +SSF A+LF  K+ S  SSSSG+F+ +FP+P KG  R+ S+S       +G+Q +  +  N+    +EPCHLSSSLYYGGQD Y++S + +++PP
Subjt:  SKGNQASSFVADLFDVKE-SSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPRYTKQGNS-GGSLEPCHLSSSLYYGGQDGYSQSPSAESFPP

Query:  -PTLKKTGGEDDPNGNNSQTASRGNWWQGN
            ++  GEDD NG N Q  SRGNWWQG+
Subjt:  -PTLKKTGGEDDPNGNNSQTASRGNWWQGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGCACACGTGGCACAACAAGATATGTCCAATTGGGATCACATGTGGACCACACTTGGCACTTATCTTCCTATGTTCTC
ACAGGAAAGCATGAATGATATTATTATTATTTTGTATGGAAAGTCTAAAGGGAATCAAGCCTCCTCTTTCGTTGCCGATCTTTTCGATGTCAAGGAATCGTCATTGTCAT
CATCATCAGGAGTTTTTGCAGCAATCTTTCCTTATCCACAGAAGGGGGGAGGCAGGAACTCTTCTAGCTCTGGGGATTGGCTAAAACAGACCAATGGAAATCAACCACGC
TACACCAAGCAAGGAAATTCAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGGGGACAAGATGGCTACTCCCAGTCCCCATCAGCTGAATCATT
CCCACCACCCACTTTGAAGAAAACTGGGGGAGAAGATGATCCAAATGGAAACAACTCACAAACTGCTTCTAGGGGAAACTGGTGGCAAGGTAATAATGAAATGGATAAAG
TTCCCTTTATTATTAGGACCTCTGCCTTGACATTTTGTTTTTGGTTGCAGGAGTTCATAAACAGCAGAGCAGATGAAGATTTGAAGTGGGATATATAA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGAAATCATGTGGGCTCTGCCCGCGCAGCACACGTGGCACAACAAGATATGTCCAATTGGGATCACATGTGGACCACACTTGGCACTTATCTTCCTATGTTCTC
ACAGGAAAGCATGAATGATATTATTATTATTTTGTATGGAAAGTCTAAAGGGAATCAAGCCTCCTCTTTCGTTGCCGATCTTTTCGATGTCAAGGAATCGTCATTGTCAT
CATCATCAGGAGTTTTTGCAGCAATCTTTCCTTATCCACAGAAGGGGGGAGGCAGGAACTCTTCTAGCTCTGGGGATTGGCTAAAACAGACCAATGGAAATCAACCACGC
TACACCAAGCAAGGAAATTCAGGAGGGAGCTTGGAGCCTTGTCATCTGAGTTCATCTCTATACTATGGGGGACAAGATGGCTACTCCCAGTCCCCATCAGCTGAATCATT
CCCACCACCCACTTTGAAGAAAACTGGGGGAGAAGATGATCCAAATGGAAACAACTCACAAACTGCTTCTAGGGGAAACTGGTGGCAAGGTAATAATGAAATGGATAAAG
TTCCCTTTATTATTAGGACCTCTGCCTTGACATTTTGTTTTTGGTTGCAGGAGTTCATAAACAGCAGAGCAGATGAAGATTTGAAGTGGGATATATAA
Protein sequenceShow/hide protein sequence
MTRNHVGSARAAHVAQQDMSNWDHMWTTLGTYLPMFSQESMNDIIIILYGKSKGNQASSFVADLFDVKESSLSSSSGVFAAIFPYPQKGGGRNSSSSGDWLKQTNGNQPR
YTKQGNSGGSLEPCHLSSSLYYGGQDGYSQSPSAESFPPPTLKKTGGEDDPNGNNSQTASRGNWWQGNNEMDKVPFIIRTSALTFCFWLQEFINSRADEDLKWDI