; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002426 (gene) of Chayote v1 genome

Gene IDSed0002426
OrganismSechium edule (Chayote v1)
DescriptionGlycine-rich RNA-binding protein RZ1C-like isoform X1
Genome locationLG07:38340184..38345650
RNA-Seq ExpressionSed0002426
SyntenySed0002426
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648851.1 hypothetical protein Csa_008374 [Cucumis sativus]2.6e-14489.93Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSWDITERQLENAF+RFGKIIDSQIM+EKNTGRPRGFGFITFSDRRGMDD+IREM+GQE GERIISVN+AEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY
        S+GGRGS  GGGGGDRSARQDECFKCGRLGHWARDCPSVGG  GRGRGGDSFLARSRLGDSDRGDRFA D++RYV+DRY+ GGRFGDRDRFD SSR +KY
Subjt:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY

Query:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY
        GSRDR VSDRYPPGGDRFGSSRY NDSDR PVNGYGKDRGYY+DGGP GVDKYGSGGPARDEGRSYRNRPAPYDRP+R GRPSSF+RY
Subjt:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY

XP_004142412.1 glycine-rich RNA-binding protein RZ1C isoform X1 [Cucumis sativus]2.6e-14489.93Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSWDITERQLENAF+RFGKIIDSQIM+EKNTGRPRGFGFITFSDRRGMDD+IREM+GQE GERIISVN+AEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY
        S+GGRGS  GGGGGDRSARQDECFKCGRLGHWARDCPSVGG  GRGRGGDSFLARSRLGDSDRGDRFA D++RYV+DRY+ GGRFGDRDRFD SSR +KY
Subjt:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY

Query:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY
        GSRDR VSDRYPPGGDRFGSSRY NDSDR PVNGYGKDRGYY+DGGP GVDKYGSGGPARDEGRSYRNRPAPYDRP+R GRPSSF+RY
Subjt:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY

XP_008446829.1 PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucumis melo]8.4e-14390.28Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSWDITERQLENAF+RFGKIIDSQIM+EKNTGRPRGFGFITFSDRRGMDD+IREM+GQE GERIISVN+AEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY
        S+GGRG SYGGGGGDRSARQDECFKCGRLGHWARDCPSVGG  GRGRGGDSFLARSRLGD DRGDRFA D++RYV+DRYE GGRFGDRDRFD SSR +KY
Subjt:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY

Query:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY
        GSRDR VSDRYPPGGDRFGS RYNNDSDR PVNGYGKDRGYY+D GP GVDKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSF+RY
Subjt:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY

XP_022139343.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]4.8e-13884.16Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIM+EKNTGR RGFGFITFSDRRGMDD+IREM+GQELGERIISVN+AEPKMGED+DHGYRG GY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKYG
        S+GGRG SYGGGGGD+SARQDECFKCGRLGHWARDC SVGGG GR   GDSFLARSRLGDSDRGDRFA D++RYV+DRYE GGRFGDRDRFDSSR +KY 
Subjt:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKYG

Query:  SRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRG----------------YYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSF
        SRDR VSDRYPP GDRFGSS YNNDSDR PVNGYGKDRG                YY+DGGP G+DKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSF
Subjt:  SRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRG----------------YYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSF

Query:  ERY
        +RY
Subjt:  ERY

XP_038892830.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]3.8e-14389.62Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSWDITERQLENAF+RFGKIIDSQIM+EKNTGRPRGFGFITFSDRRGMDD+IREM+GQE GERIISVN+AEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGS-SYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDK
        S+GGRGS   GGGGGDRSARQDECFKCGRLGHWARDCPSVGG  GRGRGGDSFLAR+RLGDSDRGDRFA D++RYV+DRYE GGRFGDRDRFD SSR +K
Subjt:  SSGGRGS-SYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDK

Query:  YGSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY
        YGSRDR VS+RYPPGGDRFGSSRYNNDSDR PVNGYGKDRGYY+DGGP GVDKYGSGGPAR+EGRSYRNRPAPYDRPSR GRPSSF+RY
Subjt:  YGSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY

TrEMBL top hitse value%identityAlignment
A0A1S3BGN5 glycine-rich RNA-binding protein RZ1C-like isoform X14.1e-14390.28Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSWDITERQLENAF+RFGKIIDSQIM+EKNTGRPRGFGFITFSDRRGMDD+IREM+GQE GERIISVN+AEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY
        S+GGRG SYGGGGGDRSARQDECFKCGRLGHWARDCPSVGG  GRGRGGDSFLARSRLGD DRGDRFA D++RYV+DRYE GGRFGDRDRFD SSR +KY
Subjt:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY

Query:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY
        GSRDR VSDRYPPGGDRFGS RYNNDSDR PVNGYGKDRGYY+D GP GVDKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSF+RY
Subjt:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY

A0A5D3CG30 Glycine-rich RNA-binding protein RZ1C-like isoform X14.1e-14390.28Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSWDITERQLENAF+RFGKIIDSQIM+EKNTGRPRGFGFITFSDRRGMDD+IREM+GQE GERIISVN+AEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY
        S+GGRG SYGGGGGDRSARQDECFKCGRLGHWARDCPSVGG  GRGRGGDSFLARSRLGD DRGDRFA D++RYV+DRYE GGRFGDRDRFD SSR +KY
Subjt:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFD-SSRHDKY

Query:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY
        GSRDR VSDRYPPGGDRFGS RYNNDSDR PVNGYGKDRGYY+D GP GVDKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSF+RY
Subjt:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY

A0A6J1CFE7 glycine-rich RNA-binding protein RZ1C-like isoform X12.3e-13884.16Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGR+EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIM+EKNTGR RGFGFITFSDRRGMDD+IREM+GQELGERIISVN+AEPKMGED+DHGYRG GY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKYG
        S+GGRG SYGGGGGD+SARQDECFKCGRLGHWARDC SVGGG GR   GDSFLARSRLGDSDRGDRFA D++RYV+DRYE GGRFGDRDRFDSSR +KY 
Subjt:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKYG

Query:  SRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRG----------------YYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSF
        SRDR VSDRYPP GDRFGSS YNNDSDR PVNGYGKDRG                YY+DGGP G+DKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSF
Subjt:  SRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRG----------------YYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSF

Query:  ERY
        +RY
Subjt:  ERY

A0A6J1FZZ1 glycine-rich RNA-binding protein RZ1C-like isoform X13.7e-13687.89Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGRDEYRIFVGGLSW+ITERQLENAFSRFGKIIDSQIM+EKNTGRPRGFGFITFSDRRGMDD+IREM+GQE GERIISVN+AEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSY-GGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKY
        SSGGR SSY GGGGGDRSARQDECFKCGR GHWARDCP VGG  GRGRGGDSFL+R RLGDSD GDRFA D++RYV+DRYE GGR GDRDRFDSSR DKY
Subjt:  SSGGRGSSY-GGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKY

Query:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY
        GSRDR VSDRYPP GDRFGSSRYNNDS R PVN +GKDRGYY+DGGP GVDKY S GPAR+EGRSYRNRPAPYDRPSR AGRPSSF+RY
Subjt:  GSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY

A0A6J1HNQ1 glycine-rich RNA-binding protein RZ1C-like isoform X14.4e-13787.85Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY
        MAGRDEYRIFVGGLSW+ITERQLENAFSRFGKIIDSQIM+EKNTGRPRGFGFITFSDRRGMDD+IREM+GQE GERIISVN+AEPKMGEDMDHGYRGGGY
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGY

Query:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKYG
        SSGGR SSYGGGGGDRSARQDECFKCGR GHWARDCP VGG  GRGRGGDSFL+R RLGDS+ GDRFA D++RYV+DRYE GGR GDRDRFDSSR DKYG
Subjt:  SSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKYG

Query:  SRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY
        SRDR VSDRYPP GDRFGSSRYNNDS R PVN +GKDRGYY+DGGP GVDKY S GPAR+EGRSYRNRPAPYDRPSR AGRPSSF+RY
Subjt:  SRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B5.4e-6852.51Show/hide
Query:  GRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DD+I+ M+G+ELG ++ISVN+AEPK+ GED+D   +GGGYS
Subjt:  GRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKM-GEDMDHGYRGGGYS

Query:  SGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGG--------TGRGRGGDSFLARSRLGDSD--RGDRFAVDSHRYVEDRYE-SGGRFGDRDR
        S G+G+            +DECFKC R GHWARDCPS G            R R GD    R R GD D  R      +  RY++ R +  GGR+  RDR
Subjt:  SGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGG--------TGRGRGGDSFLARSRLGDSD--RGDRFAVDSHRYVEDRYE-SGGRFGDRDR

Query:  FDSSRHDKYGSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY
        FDS   DKY  RD    +RY P GDRF S RY      L     G++R Y +D       D+YG  GP RDEGR YR+RP PYDRPSR  GRPSS+ER+
Subjt:  FDSSRHDKYGSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY

P49311 Glycine-rich RNA-binding protein GRP2A1.6e-2446.67Show/hide
Query:  MAGRD-EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPK------MGEDMDH
        MA  D EYR FVGGL+W   ER LE AFS+FG+++DS+I+ ++ TGR RGFGF+TF D + M D+I  MNGQ+L  R I+VN A+ +       G     
Subjt:  MAGRD-EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPK------MGEDMDH

Query:  GYR-GGGYSSGG--------RGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGG
        GYR GGGY  GG         G  Y GGGG  S+R       G  G   RD    GGG G G GG
Subjt:  GYR-GGGYSSGG--------RGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C4.6e-7554.49Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGED--MDHGYRGG
        MA ++  RIFVGGLS ++T+R LE AFSRFG I+D QIM+E++TGR RGFGFITF+DRR MD+SIREM+G++ G+R+ISVNRAEPK+G D    HG RGG
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGED--MDHGYRGG

Query:  ---GYSSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFA-----VDSHRYVEDRYESGGRFGDRDR
           GYS  G+GS  GGGGG     +DECFKCGR+GHWARDCPS GGG G   GG S  A +  G   R DR+A     VD  RY++DRY+   R+G RDR
Subjt:  ---GYSSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFA-----VDSHRYVEDRYESGGRFGDRDR

Query:  FDSSRHDKYGSRDRIVSDRYPPGGDRF-GSSRYNNDSDRLPVNGYGKDRGYYKDGGP-YGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRAG--
        FDS   + Y  RDR  SDRY    DRF G  RY+  SDR P   Y K R + +D  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR+G  
Subjt:  FDSSRHDKYGSRDRIVSDRYPPGGDRF-GSSRYNNDSDRLPVNGYGKDRGYYKDGGP-YGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRAG--

Query:  ----RPSSFERY
              S+F+RY
Subjt:  ----RPSSFERY

Q99070 Glycine-rich RNA-binding protein 21.3e-2444.31Show/hide
Query:  MAGRD-EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGG
        MA  D EYR FVGGL+W      LE AF+ FG++IDS+++ ++ TGR RGFGF+TFS  + M D+I  MNG+EL  R I+VN+A+ + G     GY GGG
Subjt:  MAGRD-EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGG

Query:  YSSGGR-GSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGD
           GGR G  YGGGGG    R++     G  G+        GGG G   GG  +      G  +RGD
Subjt:  YSSGGR-GSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGD

Q9LIN3 Glycine-rich RNA-binding protein RZ1A7.4e-3335.93Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMG-----EDMDHGY
        M+   EYR F+GGL+W  ++R L +AF ++G +++++++++K +GR RGFGFITF +++ MD++I  MNG +L  R I+V++A+P  G      D D G 
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMG-----EDMDHGY

Query:  RGGGYSSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSR
        R  GY       S G GGGD       CFKCG+ GH+AR+CPS                                     E   + GGRF  +D   SS+
Subjt:  RGGGYSSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSR

Query:  HDKYGSRDRIVSDRYPPGGDRFGS--SRYNNDSDRLPVNGYGKDRGYYKDGG--PYGVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRAG
         D+YG++D    DRY    DR+G+   RY++  DR        DR   +DGG   YG D+ G  +GG +RD G        R+  APYDRP   G
Subjt:  HDKYGSRDRIVSDRYPPGGDRFGS--SRYNNDSDRLPVNGYGKDRGYYKDGG--PYGVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRAG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.8e-6952.51Show/hide
Query:  GRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DD+I+ M+G+ELG ++ISVN+AEPK+ GED+D   +GGGYS
Subjt:  GRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKM-GEDMDHGYRGGGYS

Query:  SGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGG--------TGRGRGGDSFLARSRLGDSD--RGDRFAVDSHRYVEDRYE-SGGRFGDRDR
        S G+G+            +DECFKC R GHWARDCPS G            R R GD    R R GD D  R      +  RY++ R +  GGR+  RDR
Subjt:  SGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGG--------TGRGRGGDSFLARSRLGDSD--RGDRFAVDSHRYVEDRYE-SGGRFGDRDR

Query:  FDSSRHDKYGSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY
        FDS   DKY  RD    +RY P GDRF S RY      L     G++R Y +D       D+YG  GP RDEGR YR+RP PYDRPSR  GRPSS+ER+
Subjt:  FDSSRHDKYGSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.8e-6952.51Show/hide
Query:  GRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKM-GEDMDHGYRGGGYS
        G  E RIFVGGLSWD+TERQLE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DD+I+ M+G+ELG ++ISVN+AEPK+ GED+D   +GGGYS
Subjt:  GRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKM-GEDMDHGYRGGGYS

Query:  SGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGG--------TGRGRGGDSFLARSRLGDSD--RGDRFAVDSHRYVEDRYE-SGGRFGDRDR
        S G+G+            +DECFKC R GHWARDCPS G            R R GD    R R GD D  R      +  RY++ R +  GGR+  RDR
Subjt:  SGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGG--------TGRGRGGDSFLARSRLGDSD--RGDRFAVDSHRYVEDRYE-SGGRFGDRDR

Query:  FDSSRHDKYGSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY
        FDS   DKY  RD    +RY P GDRF S RY      L     G++R Y +D       D+YG  GP RDEGR YR+RP PYDRPSR  GRPSS+ER+
Subjt:  FDSSRHDKYGSRDRIVSDRYPPGGDRFGSSRYNNDSDRLPVNGYGKDRGYYKDGGPYGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-AGRPSSFERY

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain5.2e-3435.93Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMG-----EDMDHGY
        M+   EYR F+GGL+W  ++R L +AF ++G +++++++++K +GR RGFGFITF +++ MD++I  MNG +L  R I+V++A+P  G      D D G 
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMG-----EDMDHGY

Query:  RGGGYSSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSR
        R  GY       S G GGGD       CFKCG+ GH+AR+CPS                                     E   + GGRF  +D   SS+
Subjt:  RGGGYSSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSR

Query:  HDKYGSRDRIVSDRYPPGGDRFGS--SRYNNDSDRLPVNGYGKDRGYYKDGG--PYGVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRAG
         D+YG++D    DRY    DR+G+   RY++  DR        DR   +DGG   YG D+ G  +GG +RD G        R+  APYDRP   G
Subjt:  HDKYGSRDRIVSDRYPPGGDRFGS--SRYNNDSDRLPVNGYGKDRGYYKDGG--PYGVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRAG

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.5e-2544.1Show/hide
Query:  EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPK--MGEDMDHGYRGGGYSSG
        EYR FVGGL+W   +  L+  FS+FG +IDS+I+ ++ +GR RGFGF+TF D + M D+I EMNG+EL  R+I+VN A+ +   G     G  GGGY SG
Subjt:  EYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPK--MGEDMDHGYRGGGYSSG

Query:  GRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRG
        G G   GGGGG  S      ++    G+      S GGG GRG GG         G  D G
Subjt:  GRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.2e-7654.49Show/hide
Query:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGED--MDHGYRGG
        MA ++  RIFVGGLS ++T+R LE AFSRFG I+D QIM+E++TGR RGFGFITF+DRR MD+SIREM+G++ G+R+ISVNRAEPK+G D    HG RGG
Subjt:  MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGED--MDHGYRGG

Query:  ---GYSSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFA-----VDSHRYVEDRYESGGRFGDRDR
           GYS  G+GS  GGGGG     +DECFKCGR+GHWARDCPS GGG G   GG S  A +  G   R DR+A     VD  RY++DRY+   R+G RDR
Subjt:  ---GYSSGGRGSSYGGGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFA-----VDSHRYVEDRYESGGRFGDRDR

Query:  FDSSRHDKYGSRDRIVSDRYPPGGDRF-GSSRYNNDSDRLPVNGYGKDRGYYKDGGP-YGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRAG--
        FDS   + Y  RDR  SDRY    DRF G  RY+  SDR P   Y K R + +D  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR+G  
Subjt:  FDSSRHDKYGSRDRIVSDRYPPGGDRF-GSSRYNNDSDRLPVNGYGKDRGYYKDGGP-YGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRAG--

Query:  ----RPSSFERY
              S+F+RY
Subjt:  ----RPSSFERY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGAGAGATGAGTACCGAATATTTGTCGGTGGGTTATCGTGGGACATCACGGAGCGTCAGCTTGAGAACGCATTCAGTCGATTCGGCAAGATTATCGATTCTCA
GATCATGATCGAAAAGAATACAGGGCGTCCACGTGGCTTTGGGTTTATTACATTTTCAGATCGCCGGGGAATGGATGATTCTATCAGAGAGATGAATGGACAGGAACTTG
GAGAAAGAATTATTTCAGTGAATAGGGCTGAACCTAAGATGGGAGAAGATATGGACCATGGTTACAGAGGTGGAGGCTACTCAAGTGGTGGTAGAGGTAGCAGCTATGGT
GGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGACGTCTTGGACACTGGGCCAGAGATTGTCCTTCTGTGGGTGGTGGCACTGGCCGAGGAAG
GGGAGGAGACTCATTTCTTGCACGTTCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGTAGATAGTCATCGATATGTAGAGGATCGTTATGAAAGTGGTGGGC
GCTTTGGGGATAGAGATCGTTTTGATAGCAGCAGGCACGACAAATATGGAAGCCGTGACCGTATTGTTAGTGACAGGTACCCACCTGGTGGAGATCGCTTTGGAAGCAGT
AGGTATAACAATGATTCCGATCGACTTCCCGTCAATGGCTATGGTAAAGACAGGGGCTATTATAAAGATGGCGGACCGTATGGAGTTGATAAGTATGGAAGTGGAGGTCC
AGCACGGGACGAGGGAAGAAGCTATAGGAACAGACCAGCTCCTTACGATCGTCCTAGCAGGGCAGGGCGGCCATCTTCATTTGAGCGTTATTGA
mRNA sequenceShow/hide mRNA sequence
AACAAATATGGCGTCAATTTCCCGATTTATTTTCTAGGGTTCTTCAGGAATTTGTATGAACAAGGCGAGGACTCATTCGATCAGAAAATTTCGCCCTAACCGAACGAACC
AGGTGATTTTTTCTTTTGAAATTCGGAGATCGATATGGCTGGGAGAGATGAGTACCGAATATTTGTCGGTGGGTTATCGTGGGACATCACGGAGCGTCAGCTTGAGAACG
CATTCAGTCGATTCGGCAAGATTATCGATTCTCAGATCATGATCGAAAAGAATACAGGGCGTCCACGTGGCTTTGGGTTTATTACATTTTCAGATCGCCGGGGAATGGAT
GATTCTATCAGAGAGATGAATGGACAGGAACTTGGAGAAAGAATTATTTCAGTGAATAGGGCTGAACCTAAGATGGGAGAAGATATGGACCATGGTTACAGAGGTGGAGG
CTACTCAAGTGGTGGTAGAGGTAGCAGCTATGGTGGTGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGACGTCTTGGACACTGGGCCAGAGATT
GTCCTTCTGTGGGTGGTGGCACTGGCCGAGGAAGGGGAGGAGACTCATTTCTTGCACGTTCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGTAGATAGTCAT
CGATATGTAGAGGATCGTTATGAAAGTGGTGGGCGCTTTGGGGATAGAGATCGTTTTGATAGCAGCAGGCACGACAAATATGGAAGCCGTGACCGTATTGTTAGTGACAG
GTACCCACCTGGTGGAGATCGCTTTGGAAGCAGTAGGTATAACAATGATTCCGATCGACTTCCCGTCAATGGCTATGGTAAAGACAGGGGCTATTATAAAGATGGCGGAC
CGTATGGAGTTGATAAGTATGGAAGTGGAGGTCCAGCACGGGACGAGGGAAGAAGCTATAGGAACAGACCAGCTCCTTACGATCGTCCTAGCAGGGCAGGGCGGCCATCT
TCATTTGAGCGTTATTGAATGTTAATTGTGAGTACCATTATCAGGTTTATCTGCGAAGTACTACATTCTCAGTGTTGTGTGCTGTTGTTAGTTATTTAAGAACTAGTTGG
AGTACCATCGCCTGACAGAAAGATTGTTGCAGTTTCATCTAGCTTTCATGTATCTGAGTTTTTGTTCAGAGACAGATAAATGCTCTAAAGATCTATGAATGGAAAGAGAA
CAGCTTTATGTCGATCCTTTTGTGATTATAAATTTGTTGAGCTGAATCTCGGTGCGATCGACGTAAAGAAAAGTTTAGTCGAGGACTCGAGGTTCGTTTGATTGTAATTC
ATGATCATATTAGTAAATACAGGGCCATCATGGTTGGGGGTAAAACTGGCAGAAAGAAGCAGGAATTTGGTCTCCCAATGAACATCAATGATAGAGAACAGGAGTCTCCT
CTGTATTGGTTTTAAAAAAGGAAGAGAGCCATTAATGGAAGAAAGATAGTTTGGTTTGGCCCACATTTATTTCACTCAATTGGAATTATTCCTTATAGGGCTGTAAACAG
TTTGGCTCAGTTTAAGAAAGAACTGAAACCGAACTGTTGAAATATGCAGGAATAATGAGAGAATTGAGCCAAACCCCGAGCAGTCTCGAATCGCCAAGTCGACCGTACGA
TTGGTTGACCCATGTACTGTGGGCATGCAGATGATTATAATTTAACAAAAATTCGTTCCAAACTTCTGAACTTCGAGACTTCAATTTGTTTATATTTGTACCAGCCATTC
GGTTATATCCATCCATATAATTGGTTTTCTACTATTTATTCCTTAATGGGTTATATGATTTTAATTTGGTTCTACAAGTTATGGATTTTGATCACGAA
Protein sequenceShow/hide protein sequence
MAGRDEYRIFVGGLSWDITERQLENAFSRFGKIIDSQIMIEKNTGRPRGFGFITFSDRRGMDDSIREMNGQELGERIISVNRAEPKMGEDMDHGYRGGGYSSGGRGSSYG
GGGGDRSARQDECFKCGRLGHWARDCPSVGGGTGRGRGGDSFLARSRLGDSDRGDRFAVDSHRYVEDRYESGGRFGDRDRFDSSRHDKYGSRDRIVSDRYPPGGDRFGSS
RYNNDSDRLPVNGYGKDRGYYKDGGPYGVDKYGSGGPARDEGRSYRNRPAPYDRPSRAGRPSSFERY