; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002437 (gene) of Chayote v1 genome

Gene IDSed0002437
OrganismSechium edule (Chayote v1)
DescriptionRapid ALkalinization Factor
Genome locationLG09:1907780..1908518
RNA-Seq ExpressionSed0002437
SyntenySed0002437
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575064.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4981.25Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M  S VS+L+AA A++AAHFL  SAT ++FSG N +LF P KSECRGSIAECFLAG+D D S FGMEFEMDSEINRRILATTRYISYGA+RRNNVPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNCRPGAQANPY RGCSAITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

XP_022959207.1 protein RALF-like 33 [Cucurbita moschata]7.0e-4980.47Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M  S VS+L+AA A++AAHFL  SA  ++FSG N +LF P KSECRGSIAECFLAG+D D S FGMEFEMDSEINRRILATTRYISYGA+RRNNVPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNCRPGAQANPY RGCSAITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

XP_023006467.1 protein RALF-like 33 [Cucurbita maxima]1.2e-4880.47Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M  S VS+L+AA A++AAHFL SSAT ++FSG N +LF P KSECRGSI ECFLAG + D S FGMEFEMDSEINRRILATTRYISYGA+RRNNVPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNCRPGAQANPY RGCSAITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

XP_023547686.1 protein RALF-like 33 [Cucurbita pepo subsp. pepo]4.1e-4980.47Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M  S VS+L+AA  ++AAHFL SSAT ++FSG N +LF P KSECRGSIAECFLAG++ D S FGMEFEMDSEINRRILATTRYISYGA+RRNNVPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNCRPGAQANPY RGCSAITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

XP_038875155.1 protein RALF-like 33 [Benincasa hispida]5.7e-5185.94Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M  S VSSLLAAVAI+AAHFL SSAT V+FSG + LLFVP KSECRGSIAECFLAG+D D SAFGMEF MDSEINRRILATTRYISYGA+RRNNVPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNCRPGAQANPY RGC+AITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

TrEMBL top hitse value%identityAlignment
A0A6J1C9N4 protein RALF-like 335.4e-4779.69Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M+ S VSSLLAA AI AAH L SSAT  +FSG + LL+VPAKSECRGSIAEC LAGDD   S FG EFEMDSEINRRILAT RYISYGA++RN+VPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNC+PGAQANPY RGCSAITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

A0A6J1EV64 protein RALF-like 331.7e-4880.47Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M+ S V S LAA AIIAAHFL SSA  V+FSG + LLFVPA+S+CRGSIAECFLAGDD D SAFGMEFEMDSEINRRILA++RY+SYGA++RN+VPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNC+PGAQANPYRRGC+AITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

A0A6J1H3W7 protein RALF-like 333.4e-4980.47Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M  S VS+L+AA A++AAHFL  SA  ++FSG N +LF P KSECRGSIAECFLAG+D D S FGMEFEMDSEINRRILATTRYISYGA+RRNNVPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNCRPGAQANPY RGCSAITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

A0A6J1KG89 protein RALF-like 337.6e-4981.25Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M+ S V S LAA AIIAAHFL SSA VV+FSG + LLFVPA+S+CRGSIAECFLAGDD D SAFGMEFEMDSEINRRILA +RY+SYGA++RN+VPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNC+PGAQANPYRRGC+AITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

A0A6J1KVY0 protein RALF-like 335.8e-4980.47Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M  S VS+L+AA A++AAHFL SSAT ++FSG N +LF P KSECRGSI ECFLAG + D S FGMEFEMDSEINRRILATTRYISYGA+RRNNVPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCRS
        GASYYNCRPGAQANPY RGCSAITRCRS
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCRS

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 333.6e-3261.42Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M+  S   +   +AI+  HFL ++ T  + SG     FVP +S+C G+IAEC L       S    EFEMDSEINRRILATT+YISYGA+RRN VPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCR
        GASYYNCR GAQANPY RGCSAITRCR
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCR

Q945T0 Rapid alkalinization factor1.3e-2656Show/hide
Query:  VSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKS--ECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRRGAS
        V S L    +I A F+  S      SG  + + +PA+S   C+GSI EC    +         EFE+DSE NRRILAT +YISYGA+++N+VPCSRRGAS
Subjt:  VSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKS--ECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRRGAS

Query:  YYNCRPGAQANPYRRGCSAITRCRS
        YYNC+PGAQANPY RGCSAITRCRS
Subjt:  YYNCRPGAQANPYRRGCSAITRCRS

Q9LUS7 Rapid alkalinization factor 232.5e-3359.26Show/hide
Query:  KTSSVSSLLAAVAIIAAH--FLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLA---GDDGD----GSAFGMEFEMDSEINRRILATTRYISYGAMRR
        + S  +++ A + I+A H   +  S+   EF+G     F P ++ECRG+IAEC ++   GD GD    G   G EFEMDSEINRRILAT RYISYGA+RR
Subjt:  KTSSVSSLLAAVAIIAAH--FLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLA---GDDGD----GSAFGMEFEMDSEINRRILATTRYISYGAMRR

Query:  NNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCR
        N +PCSRRGASYYNCR GAQANPY RGCSAITRCR
Subjt:  NNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCR

Q9MA62 Protein RALF-like 228.1e-2451.52Show/hide
Query:  TSSVSSLLAAVAIIAAHFLHSSATVVEFSG--VNNLLFVPAKSE-----CRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNV
        T ++ +++A +AI+         + VE +G   ++L FV A S      C GSIAEC    +         E E DS+I+RRILA  +YISYGAMRRN+V
Subjt:  TSSVSSLLAAVAIIAAHFLHSSATVVEFSG--VNNLLFVPAKSE-----CRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNV

Query:  PCSRRGASYYNCRPGAQANPYRRGCSAITRCR
        PCSRRGASYYNC+ GAQANPY RGCS ITRCR
Subjt:  PCSRRGASYYNCRPGAQANPYRRGCSAITRCR

Q9SRY3 Protein RALF-like 14.3e-2567.44Show/hide
Query:  SECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCRS
        S C GSIAEC  A ++          EMDSEINRRILATT+YISY +++RN+VPCSRRGASYYNC+ GAQANPY RGCS I RCRS
Subjt:  SECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 13.1e-2667.44Show/hide
Query:  SECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCRS
        S C GSIAEC  A ++          EMDSEINRRILATT+YISY +++RN+VPCSRRGASYYNC+ GAQANPY RGCS I RCRS
Subjt:  SECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCRS

AT2G33775.1 ralf-like 196.2e-1962.5Show/hide
Query:  GDDGDGSAFGMEFEMDSEINRRILATTR-YISYGAMRRNNVPCSRRGASYYNCRPGAQANPYRRGCSAITRC
        G+DG+     +++ MDSE NRR LA  R YISYGA+R+NNVPCSRRG SYY+C+   +ANPYRRGCS IT C
Subjt:  GDDGDGSAFGMEFEMDSEINRRILATTR-YISYGAMRRNNVPCSRRGASYYNCRPGAQANPYRRGCSAITRC

AT3G05490.1 ralf-like 225.8e-2551.52Show/hide
Query:  TSSVSSLLAAVAIIAAHFLHSSATVVEFSG--VNNLLFVPAKSE-----CRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNV
        T ++ +++A +AI+         + VE +G   ++L FV A S      C GSIAEC    +         E E DS+I+RRILA  +YISYGAMRRN+V
Subjt:  TSSVSSLLAAVAIIAAHFLHSSATVVEFSG--VNNLLFVPAKSE-----CRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNV

Query:  PCSRRGASYYNCRPGAQANPYRRGCSAITRCR
        PCSRRGASYYNC+ GAQANPY RGCS ITRCR
Subjt:  PCSRRGASYYNCRPGAQANPYRRGCSAITRCR

AT3G16570.1 rapid alkalinization factor 231.8e-3459.26Show/hide
Query:  KTSSVSSLLAAVAIIAAH--FLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLA---GDDGD----GSAFGMEFEMDSEINRRILATTRYISYGAMRR
        + S  +++ A + I+A H   +  S+   EF+G     F P ++ECRG+IAEC ++   GD GD    G   G EFEMDSEINRRILAT RYISYGA+RR
Subjt:  KTSSVSSLLAAVAIIAAH--FLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLA---GDDGD----GSAFGMEFEMDSEINRRILATTRYISYGAMRR

Query:  NNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCR
        N +PCSRRGASYYNCR GAQANPY RGCSAITRCR
Subjt:  NNVPCSRRGASYYNCRPGAQANPYRRGCSAITRCR

AT4G15800.1 ralf-like 332.6e-3361.42Show/hide
Query:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR
        M+  S   +   +AI+  HFL ++ T  + SG     FVP +S+C G+IAEC L       S    EFEMDSEINRRILATT+YISYGA+RRN VPCSRR
Subjt:  MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRR

Query:  GASYYNCRPGAQANPYRRGCSAITRCR
        GASYYNCR GAQANPY RGCSAITRCR
Subjt:  GASYYNCRPGAQANPYRRGCSAITRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCTCAAGCGTTTCTTCTCTCCTCGCCGCCGTCGCCATTATCGCCGCCCATTTTCTCCACTCATCGGCGACGGTCGTCGAATTCTCCGGCGTCAACAACCTCCT
CTTCGTTCCGGCCAAATCCGAATGCAGAGGCTCCATCGCCGAGTGCTTCCTCGCCGGAGACGACGGCGACGGTTCCGCCTTCGGAATGGAGTTCGAAATGGACTCTGAGA
TCAATCGACGAATTCTAGCCACCACTCGCTACATCAGCTACGGCGCTATGAGAAGGAACAACGTTCCTTGCTCTCGCCGCGGTGCTTCGTACTACAACTGCAGGCCAGGC
GCTCAGGCGAATCCGTACCGCCGCGGTTGCAGCGCAATTACTCGCTGCCGGAGTTAA
mRNA sequenceShow/hide mRNA sequence
AACCAACAGAACCACCAAAAATGAAAACCTCAAGCGTTTCTTCTCTCCTCGCCGCCGTCGCCATTATCGCCGCCCATTTTCTCCACTCATCGGCGACGGTCGTCGAATTC
TCCGGCGTCAACAACCTCCTCTTCGTTCCGGCCAAATCCGAATGCAGAGGCTCCATCGCCGAGTGCTTCCTCGCCGGAGACGACGGCGACGGTTCCGCCTTCGGAATGGA
GTTCGAAATGGACTCTGAGATCAATCGACGAATTCTAGCCACCACTCGCTACATCAGCTACGGCGCTATGAGAAGGAACAACGTTCCTTGCTCTCGCCGCGGTGCTTCGT
ACTACAACTGCAGGCCAGGCGCTCAGGCGAATCCGTACCGCCGCGGTTGCAGCGCAATTACTCGCTGCCGGAGTTAATCTCTAATCGCTCGATTACTTATTCGGATTTAG
GTTCGTTCTTCGTATTCTATTCCTTCGGTTCTTTTGTGCGTTTATACAGAATATACTTATCGATTTGAGTAATAAGATCCATACTGATTGTTGAAATGTAATATAGATCT
GTTTCTCTTGAGTTGTTTATATGAATTTTTTGTTCTTTTTAGTTTTCGTCGCTGATTCTGATTGTTTGTAGAATCGCTTGTTCTTGTTTGCAATTCGTAATACAGTGATA
GGAAAGAACACAGTATCTGATTATTATTTTTTTCCTTCTTTTTTGTAATTTTCGTGGCTGATTCTGATTGTTTCTTGAA
Protein sequenceShow/hide protein sequence
MKTSSVSSLLAAVAIIAAHFLHSSATVVEFSGVNNLLFVPAKSECRGSIAECFLAGDDGDGSAFGMEFEMDSEINRRILATTRYISYGAMRRNNVPCSRRGASYYNCRPG
AQANPYRRGCSAITRCRS