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Sed0002441 (gene) of Chayote v1 genome

Gene IDSed0002441
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG06:39546544..39546789
RNA-Seq ExpressionSed0002441
SyntenySed0002441
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146810.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus]4.3e-2878.95Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        S + V+GVKE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYEPEGWK KCGPSFY P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

XP_008447616.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo]7.4e-2876.32Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWK KCGPSFY P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

XP_022955437.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]3.9e-2980.52Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWK KCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

XP_022980756.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]5.1e-2980.52Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWK KCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

XP_023526549.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]3.9e-2980.52Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWK KCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

TrEMBL top hitse value%identityAlignment
A0A0A0LCQ8 Epidermal patterning factor-like protein5.5e-2980Show/hide
Query:  VKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        +K V+GVKE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYEPEGWK KCGPSFY P
Subjt:  VKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

A0A1S3BIS6 Epidermal patterning factor-like protein3.6e-2876.32Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWK KCGPSFY P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

A0A5D3BVF6 Epidermal patterning factor-like protein3.6e-2876.32Show/hide
Query:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        S + V+G+KE    YRGMRKIGSSPP CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEGWK KCGPSFY P
Subjt:  SVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

A0A6J1GTM4 Epidermal patterning factor-like protein1.9e-2980.52Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWK KCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

A0A6J1IUG9 Epidermal patterning factor-like protein2.5e-2980.52Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        SVK V EGV + G +YRGMRKIGSSPP CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEGWK KCGPSFY P
Subjt:  SVKVV-EGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 35.3e-1358.49Show/hide
Query:  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGP
        R+IGS PP CE KCYGC PCEAIQ PT +    H+   Y NY+PEGW+  C P
Subjt:  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 65.2e-0844.26Show/hide
Query:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+ KCG   Y+P
Subjt:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 11.8e-0839.47Show/hide
Query:  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKSKCGPSFYIP
        ++GS+PP C ++C  C PC AIQVPT   R                    T V  QY+NY+P GWK  C   FY P
Subjt:  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKSKCGPSFYIP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related3.7e-0944.26Show/hide
Query:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+ KCG   Y+P
Subjt:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

AT2G30370.2 allergen-related3.7e-0944.26Show/hide
Query:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP
        R +R +GSSPP C  KC  C PC+ + VP     GT V  +   Y PE W+ KCG   Y+P
Subjt:  RGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP

AT3G13898.1 unknown protein3.8e-1458.49Show/hide
Query:  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGP
        R+IGS PP CE KCYGC PCEAIQ PT +    H+   Y NY+PEGW+  C P
Subjt:  RKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGP

AT5G10310.1 unknown protein1.3e-0939.47Show/hide
Query:  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKSKCGPSFYIP
        ++GS+PP C ++C  C PC AIQVPT   R                    T V  QY+NY+P GWK  C   FY P
Subjt:  KIGSSPPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGWKSKCGPSFYIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTG
CTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATCCAAGT
GTGGCCCTTCCTTTTACATCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAATAGGGTCAAGTCCACCAATGTGTGAGCACAAGTG
CTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGGAAATCCAAGT
GTGGCCCTTCCTTTTACATCCCTTGA
Protein sequenceShow/hide protein sequence
MQLWLSVKVVEGVKENGVMYRGMRKIGSSPPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGWKSKCGPSFYIP