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Sed0002452 (gene) of Chayote v1 genome

Gene IDSed0002452
OrganismSechium edule (Chayote v1)
Descriptioncoiled-coil domain-containing glutamate-rich protein 1
Genome locationLG03:1066616..1067680
RNA-Seq ExpressionSed0002452
SyntenySed0002452
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578611.1 hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sororia]8.0e-5175.82Show/hide
Query:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFT---SSPASYSESQTQQPNAKTKQTDIINR
        M RAEE+ RE KQ E EDKDSI TALLSAGTA+LMAACLKRAVVLFLVE  QWRIWVF++LNLILVAIFFT   SSP+SYSESQTQ+ NAK KQ  I NR
Subjt:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFT---SSPASYSESQTQQPNAKTKQTDIINR

Query:  ECKEPEIVEKVENKKQEMDKEQEKVEE-EEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ
        ECKE E VEK+E K QE +KE+E+ EE  EEEEEEEEEEEIG+SKEELNE+VEAFI MFKKQL+SDAR+  NR  PLSYN Q
Subjt:  ECKEPEIVEKVENKKQEMDKEQEKVEE-EEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ

KAG7016160.1 hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-5175.54Show/hide
Query:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFT---SSPASYSESQTQQPNAKTKQTDIINR
        M RAEE+ RE KQ E EDKDSI TALLSAGTA+LMAACLKRAVVLFLVE  QWRIWVF++LNLILVAIFFT   SSP+SYSESQTQ+ NAK KQ  I NR
Subjt:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFT---SSPASYSESQTQQPNAKTKQTDIINR

Query:  ECKEPEIVEKVENKKQEMDKEQEKVE---EEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ
        ECKE E VEK+E K QE +KE+E+ E   EEEEEEEEEEEEEIG+SKEELNE+VEAFI MFKKQL+SDAR+  NR  PLSYN Q
Subjt:  ECKEPEIVEKVENKKQEMDKEQEKVE---EEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ

XP_022134128.1 coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia]2.7e-4369.23Show/hide
Query:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK
        M +AEE  RE KQGE EDKDS+ T LLSAGTA+LMAACLKRAVVLFLVE  QWR+WVF+VLNLI+VAIFFTSSP++Y ES  Q P+   KQ  I +RECK
Subjt:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK

Query:  -EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEE---IGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ
           E VEKVE K QEMDKE+E  EEE EEEEEEEEEE   +G+SKEELNE+VEAFI MFK+QL+ DARK  N   PLSYN++
Subjt:  -EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEE---IGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ

XP_022959957.1 uncharacterized protein LOC111460852 [Cucurbita moschata]2.0e-4167.98Show/hide
Query:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK
        M RAEE  RE KQGE EDKD  S  +LSAGTA+LMAACLKRAVVLF + + QWRIWVF+ LNLILV IFFTSSPASYSESQTQ+P  K K          
Subjt:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK

Query:  EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ
        EPE VE+VE K+QEMDK       EEE EE+EEEE IG+SKEELNE+VEAFI MFKKQL+SDARK  +R  PLSY TQ
Subjt:  EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ

XP_038890929.1 uncharacterized protein LOC120080357 [Benincasa hispida]1.1e-4471.02Show/hide
Query:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK
        M RAEE+ RE+KQGE EDKDSI   LLSAGTA+LMAACLK+AVV+FLVE  QWRIWVF+VLNLILVAIFFTSSPASYSE+Q    N + KQ  I NRE K
Subjt:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK

Query:  EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYN
        E E  E          KE+E++EEEE EEEEEEEEEIG+SKEELNE+VEAFI MFKKQL+SDARK RNR  P SYN
Subjt:  EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYN

TrEMBL top hitse value%identityAlignment
A0A0A0KVE3 Uncharacterized protein4.3e-3462.77Show/hide
Query:  MLRAEETNREIKQ-GEAEDKDSISTALLSAGTAVLMAACLKR-AVVLFLVEQWQWRIWVFIVLNLILVAIFFTS---SPASYSESQTQQPNAKTKQTDII
        M R EE NRE+KQ GE EDKDSI  ALLSAGTA+LMA CLK+ AVV+FLVE  QWRIWVF+VLNLILVAIFFTS   +PA+YSE+Q Q+ + KTK   I 
Subjt:  MLRAEETNREIKQ-GEAEDKDSISTALLSAGTAVLMAACLKR-AVVLFLVEQWQWRIWVFIVLNLILVAIFFTS---SPASYSESQTQQPNAKTKQTDII

Query:  NRECKEPEIVE------KVENKK-QEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYN
         RE +E +  E      K+EN++ +E  KE++++ +EE+E EEEEEEEI +SKEELNE+VEAFI MFKKQL+SDARK  NR    SYN
Subjt:  NRECKEPEIVE------KVENKK-QEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYN

A0A1S3C9Q4 ABC transporter F family member 45.8e-3968.51Show/hide
Query:  MLRAEETNREIKQ-GEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINREC
        M R EE NRE+KQ GE EDKDSI  ALLSAGTA+LMA CLK+AVV+FLVE  QWRIWVF+ LNLILVAIFFTS+PA+YSE+Q Q+ + KTKQ    N E 
Subjt:  MLRAEETNREIKQ-GEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINREC

Query:  KEPEIVE-KVENKKQEMD--KEQEKVEEE-EEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYN
        KE +  E K + KK E    KE  K E+E EEEEEEEEEEEIG+SKEELNE+VEAFI MFKKQL+SDARK  NR   LSYN
Subjt:  KEPEIVE-KVENKKQEMD--KEQEKVEEE-EEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYN

A0A6J1C149 coiled-coil domain-containing glutamate-rich protein 11.3e-4369.23Show/hide
Query:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK
        M +AEE  RE KQGE EDKDS+ T LLSAGTA+LMAACLKRAVVLFLVE  QWR+WVF+VLNLI+VAIFFTSSP++Y ES  Q P+   KQ  I +RECK
Subjt:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK

Query:  -EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEE---IGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ
           E VEKVE K QEMDKE+E  EEE EEEEEEEEEE   +G+SKEELNE+VEAFI MFK+QL+ DARK  N   PLSYN++
Subjt:  -EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEE---IGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ

A0A6J1H605 uncharacterized protein LOC1114608529.5e-4267.98Show/hide
Query:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK
        M RAEE  RE KQGE EDKD  S  +LSAGTA+LMAACLKRAVVLF + + QWRIWVF+ LNLILV IFFTSSPASYSESQTQ+P  K K          
Subjt:  MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECK

Query:  EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ
        EPE VE+VE K+QEMDK       EEE EE+EEEE IG+SKEELNE+VEAFI MFKKQL+SDARK  +R  PLSY TQ
Subjt:  EPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ

A0A6J1JR04 uncharacterized protein LOC1114870566.2e-2565.96Show/hide
Query:  MAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECKEPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEE
        MAACLKRAVVLF + + QWRIWVF+VLNLILV IFFTSSPASYSE+Q Q+P   TK+  I N    EPE VE+VE K+QE+ K       EEE EE+EEE
Subjt:  MAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECKEPEIVEKVENKKQEMDKEQEKVEEEEEEEEEEEE

Query:  EEIGISKE------ELNEKVEAFIEMFKKQLLSDARKRRNR
        EEIG+SKE      ELNE+VEAFI MFKKQL+SDARK  NR
Subjt:  EEIGISKE------ELNEKVEAFIEMFKKQLLSDARKRRNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G28420.1 Putative membrane lipoprotein3.5e-0432.99Show/hide
Query:  EIKQGEAEDKDSISTALLSAGTAVLMAACLKR-AVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSES--------------QTQQPNAKTKQTDI
        E+K+    +++++ T+LL+A   VL  ACLK  + V +L+E  QWR  VF++LN++L+A++FTS+  +   S              + ++   K K+T +
Subjt:  EIKQGEAEDKDSISTALLSAGTAVLMAACLKR-AVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSES--------------QTQQPNAKTKQTDI

Query:  INREC---------KEPEIVEK---VENKKQEMDKEQEKVEE------EEEEEEEEEEEEIG-ISKEELNEKVEAFIEMFKKQLLSDARKRRNR
        +             +  E+++K   VE  K+   K +E V++      E E   EE+E E G +S EELNE+VEAFI  F++ L+ DAR+ R+R
Subjt:  INREC---------KEPEIVEK---VENKKQEMDKEQEKVEE------EEEEEEEEEEEEIG-ISKEELNEKVEAFIEMFKKQLLSDARKRRNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGGCAGAAGAAACTAACAGAGAAATCAAGCAAGGAGAGGCTGAAGATAAAGATTCTATCAGCACAGCTTTGTTATCAGCTGGAACAGCAGTGTTAATGGCAGC
TTGTTTGAAGAGAGCTGTGGTTCTGTTCTTGGTTGAACAATGGCAATGGCGGATCTGGGTGTTCATTGTTTTGAATCTCATCCTTGTAGCAATTTTCTTCACTTCAAGTC
CTGCAAGTTACAGTGAAAGCCAAACCCAACAACCAAATGCAAAAACAAAGCAAACAGATATCATAAACAGAGAGTGCAAGGAGCCTGAAATAGTGGAAAAAGTTGAGAAT
AAAAAGCAAGAAATGGATAAAGAACAAGAGAAAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGGGATATCAAAAGAGGAGTTGAATGAGAA
AGTGGAAGCTTTTATTGAGATGTTTAAGAAGCAATTGTTATCAGATGCAAGAAAAAGGAGAAACAGACTTGCCCCATTGAGCTATAATACTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGGCAGAAGAAACTAACAGAGAAATCAAGCAAGGAGAGGCTGAAGATAAAGATTCTATCAGCACAGCTTTGTTATCAGCTGGAACAGCAGTGTTAATGGCAGC
TTGTTTGAAGAGAGCTGTGGTTCTGTTCTTGGTTGAACAATGGCAATGGCGGATCTGGGTGTTCATTGTTTTGAATCTCATCCTTGTAGCAATTTTCTTCACTTCAAGTC
CTGCAAGTTACAGTGAAAGCCAAACCCAACAACCAAATGCAAAAACAAAGCAAACAGATATCATAAACAGAGAGTGCAAGGAGCCTGAAATAGTGGAAAAAGTTGAGAAT
AAAAAGCAAGAAATGGATAAAGAACAAGAGAAAGTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAATTGGGATATCAAAAGAGGAGTTGAATGAGAA
AGTGGAAGCTTTTATTGAGATGTTTAAGAAGCAATTGTTATCAGATGCAAGAAAAAGGAGAAACAGACTTGCCCCATTGAGCTATAATACTCAATAGCCAAACCCAAATT
CTTTTGTGTGGTTAAAATGAAAATGAATCCCATTGATTCAAGATTTTGGGATTGAATTTGAGGATGAAAAATGATCAGGATGTTCTTTTTGATTGTTTGGTGAGTTTCAA
GATGTTGAAAAATTGTAATCTTGAAATATATAAACGATATTCCTGAGCTGTGTTTTTGTTGTTTTAGGTCTGAATTCTTTTATTTCAACAATTGCATGCTCGTGTGGAGT
GGACGGTTGAATCAACTTCTACTATGATAATGGGTTTTTTTTTTTTTTTGAAATCTGGGTTTCATATTCATTAAGTGGTTTTACTGCTAGATATGTTAGATTAAAGAAGA
TATATGACAAAATTAGATTTTTTTTTTTTTTTTTAAGTGAAAACCCAATTTTTATATTTATTTAGAAGTTAGAACAATGTTGTCTTCAACAAAAACAATAACTTAATTAC
ACTTGTATAGTCCTTAAATGGAAAGTTAACTTGACCACTCTTATATGACTTTAAAATTAGAAGGTTATAAATTTG
Protein sequenceShow/hide protein sequence
MLRAEETNREIKQGEAEDKDSISTALLSAGTAVLMAACLKRAVVLFLVEQWQWRIWVFIVLNLILVAIFFTSSPASYSESQTQQPNAKTKQTDIINRECKEPEIVEKVEN
KKQEMDKEQEKVEEEEEEEEEEEEEEIGISKEELNEKVEAFIEMFKKQLLSDARKRRNRLAPLSYNTQ