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Sed0002471 (gene) of Chayote v1 genome

Gene IDSed0002471
OrganismSechium edule (Chayote v1)
DescriptionDUF2062 domain-containing protein
Genome locationLG03:4144828..4149143
RNA-Seq ExpressionSed0002471
SyntenySed0002471
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018639 - Domain of unknown function DUF2062


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578321.1 hypothetical protein SDJN03_22769, partial [Cucurbita argyrosperma subsp. sororia]2.0e-7885.47Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+TRP SWFN+KIVDP LQILQRG EPKQLA SAALGTTLGLFPICG+PVFLCGFAIAFLG LCHAPTVML NF+VTPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        G RFP T DALKKV TGQAS EV+LSI HV+LGWLVA PFI+G+GY+LFLPCFKILVRKF T +SSPKKSPH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
XP_022939704.1 uncharacterized protein LOC111445511 isoform X1 [Cucurbita moschata]2.0e-7885.47Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+TRP SWFN+KIVDP LQILQRG EPKQLA SAALGTTLGLFPICG+PVFLCGFAIAFLG LCHAPTVML NF+VTPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        G RFP T DALKKV TGQAS EV+LSI HV+LGWLVA PFI+G+GY+LFLPCFKILVRKF T +SSPKKSPH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
XP_022993435.1 uncharacterized protein LOC111489450 [Cucurbita maxima]1.5e-7886.05Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+TRP SWFN+KIVDP LQILQRG EPKQLA SAALGTTLGLFPICG+PVFLCGFAIAFLG LCHAPTVML NF+VTPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        G RFP T DALKKV TGQAS EV+LSI HV+LGWLVA PFI+GIGY+LFLPCFKILVRKF T +SSPKKSPH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
XP_023551372.1 uncharacterized protein LOC111809211 [Cucurbita pepo subsp. pepo]1.5e-7886.05Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+TRP SWFN+KIVDP LQILQRG EPKQLA SAALGTTLGLFPICG+PVFLCGFAIAFLG LCHAPTVML NF+VTPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        G RFP T DALKKV TGQAS EV+LSI HV+LGWLVA PFI+GIGY+LFLPCFKILVRKF T +SSPKKSPH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
XP_038886058.1 uncharacterized protein LOC120076335 [Benincasa hispida]1.3e-7785.47Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+ RP SWFN+KIVDP LQILQRG EPKQLA SAALG TLGLFPICG+ VFLCGFAIAFLGSLCHAPTVML NFI TPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        GARFP T DA KKV TGQAS EV+LSI HV+LGWLVAAPFI+G+GY LFLPCFKILVRKFGTV+SSPKK PH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
TrEMBL top hitse value%identityAlignment
A0A0A0LSU8 DUF2062 domain-containing protein3.4e-7684.3Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+ R  SWFN+KIVDP LQILQRG EPKQLA SAALG TLGLFPICG+ VFLCGFAIAFLGSLCHAPTVML NFI TPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        G RFP T DALKKV TG+AS EV+LSI H++LGWLVAAPFI+GIGYLLFLPCFKILVRKF TV+SSPKK PH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
A0A1S3B2V5 uncharacterized protein LOC1034854044.0e-7784.88Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+ RP SWF++KIVDP LQILQRG EPKQLA SAALG TLGLFPICG+ VFLCGFAIAFLGSLCHAPTVML NFI TPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        G RFP T DALKKV TG+AS EV+LSI H++LGWLVAAPFI+GIGYLLFLPCFKILVRKF TV+SSPKKSPH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
A0A6J1DE06 uncharacterized protein LOC1110201893.6e-7080.47Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MA+ G+ R  SWF+RKIVDP L+ILQRG EPKQLA SAALG TLGLFPICG+ VFLCGFAIA LGSLCHAPTVML NFI TPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKK
        G RFP T DALKK+ TGQAS EV+LSI H++LGWLVAAPFI+  GYLLFLPCFKILV KF TVSSSP+K
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKK
A0A6J1FI05 uncharacterized protein LOC111445511 isoform X19.5e-7985.47Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+TRP SWFN+KIVDP LQILQRG EPKQLA SAALGTTLGLFPICG+PVFLCGFAIAFLG LCHAPTVML NF+VTPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        G RFP T DALKKV TGQAS EV+LSI HV+LGWLVA PFI+G+GY+LFLPCFKILVRKF T +SSPKKSPH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
A0A6J1JYI3 uncharacterized protein LOC1114894507.3e-7986.05Show/hide
Query:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG
        MATVG+TRP SWFN+KIVDP LQILQRG EPKQLA SAALGTTLGLFPICG+PVFLCGFAIAFLG LCHAPTVML NF+VTPIELSLVVPFLRFGEAISG
Subjt:  MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISG

Query:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
        G RFP T DALKKV TGQAS EV+LSI HV+LGWLVA PFI+GIGY+LFLPCFKILVRKF T +SSPKKSPH
Subjt:  GARFPLTSDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33490.1 unknown protein1.5e-6071.97Show/hide
Query:  WFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISGGARFPLTSDAL
        WF++KI +P +QIL+RG EPKQLA SAALG T+G+FPICG+ V LCG AIA LGSLCHAPTVML NFI TPIELSLVVPFLR GE I+GG  FPLTSDAL
Subjt:  WFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISGGARFPLTSDAL

Query:  KKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPK
        KKV TGQASR+V LSI + +LGWL+AAPF++   Y++FLPCFKILVRKF +V S+ K
Subjt:  KKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPK
AT4G10140.1 unknown protein7.5e-6070.19Show/hide
Query:  RPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISGGARFPLT
        R  +WFN+KI DP LQIL+RGTEPKQLA SAALG TLG+FPICG+PV LCG A A LGS CHAPTVML N I TP+EL+LVVPFLR GE ++GG  FPLT
Subjt:  RPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISGGARFPLT

Query:  SDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPK
        SDALKKV TGQAS+EV LSI + +LGWLVA PF     Y++ LPCF ILVRKFG V+S+ K
Subjt:  SDALKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGTAGGATATACTCGTCCGGCCAGTTGGTTTAACCGGAAGATCGTCGATCCCTTCCTCCAAATCCTCCAGAGGGGCACAGAGCCGAAGCAACTGGCATTGTC
TGCAGCTCTTGGCACAACGCTAGGATTGTTTCCTATATGTGGTATCCCTGTTTTTCTATGTGGGTTTGCAATTGCATTTCTTGGATCCCTTTGTCACGCTCCAACAGTGA
TGCTTACTAATTTTATTGTTACTCCCATAGAATTGAGTTTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCATTTCTGGGGGAGCTCGTTTCCCATTAACATCTGATGCT
TTGAAGAAAGTGCTTACTGGCCAAGCTTCGCGTGAAGTAGTATTGAGTATTGTTCATGTGATATTGGGATGGCTTGTTGCTGCACCCTTTATCATGGGCATAGGATATTT
GTTGTTCTTACCATGTTTCAAGATTTTGGTCCGCAAGTTCGGCACTGTTTCTTCAAGCCCGAAGAAATCGCCTCATCTCTGA
mRNA sequenceShow/hide mRNA sequence
CTGATCGGCAGTGGTCTTCCGAACAGAAATCAAGAAAGTCATCGATATTCTCTGGACTTCCCGGAAAAAGGAAGGAATCATACCATTGGAAGATTTTACATTCTTTCACG
ATTCTTCAACCAATCTTAGTTGAAGAGAAAAATTCGTGTTTCTTTCTGGAAGATCAATAGTCTTCCCACACATTTCTGTATTCGATTCGTTGATTTTTATTGTTTCGATC
GAGGCTCTGGAACGAAACTAGGGTTCCTGAAAAGATTAATTAATTTGGAGGCGAAGATGGCTACTGTAGGATATACTCGTCCGGCCAGTTGGTTTAACCGGAAGATCGTC
GATCCCTTCCTCCAAATCCTCCAGAGGGGCACAGAGCCGAAGCAACTGGCATTGTCTGCAGCTCTTGGCACAACGCTAGGATTGTTTCCTATATGTGGTATCCCTGTTTT
TCTATGTGGGTTTGCAATTGCATTTCTTGGATCCCTTTGTCACGCTCCAACAGTGATGCTTACTAATTTTATTGTTACTCCCATAGAATTGAGTTTGGTGGTGCCTTTCT
TGCGTTTTGGTGAAGCCATTTCTGGGGGAGCTCGTTTCCCATTAACATCTGATGCTTTGAAGAAAGTGCTTACTGGCCAAGCTTCGCGTGAAGTAGTATTGAGTATTGTT
CATGTGATATTGGGATGGCTTGTTGCTGCACCCTTTATCATGGGCATAGGATATTTGTTGTTCTTACCATGTTTCAAGATTTTGGTCCGCAAGTTCGGCACTGTTTCTTC
AAGCCCGAAGAAATCGCCTCATCTCTGAAGTGTGGGATTGAAGGTAAGGGATATCTGATTTAAGAATCCCAGAAATGGTCATCTCCTGGAAACTTGGCGACTCGCTTTAA
CACGGTGACCTTCTTTGTATAACTGTGGTGCTGCCGCGCTCGGTCGATTCCCAGTATCTGTTTATCAGTTGCTTCTCTATGTCATGTTATGAATGCAGTTTTCTGGTTCA
AAGTTTGATCAAGCTATCATTAAAGGTGGGCTGTTTATTACTTCACCTATAAACCTTTTTCTGAATATACCTATAAACCTTTCAATTGTCAATTTCTGAAATTAAGGGGC
CAGAAGCCCAAAGCCCAAAGAATATAGCCCAATCAACTTAACATATTATTTCCCAAATATATATATAGATTTATGATGATCATGTGTTCAAGTCTGTCATCTTAAATGTT
GATGAACTATGAAAAAAGAAAATATGGAGTTTAAAGGCCAAAATGAAAATTTATCCAAATTTTAAATGGAC
Protein sequenceShow/hide protein sequence
MATVGYTRPASWFNRKIVDPFLQILQRGTEPKQLALSAALGTTLGLFPICGIPVFLCGFAIAFLGSLCHAPTVMLTNFIVTPIELSLVVPFLRFGEAISGGARFPLTSDA
LKKVLTGQASREVVLSIVHVILGWLVAAPFIMGIGYLLFLPCFKILVRKFGTVSSSPKKSPHL