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Sed0002480 (gene) of Chayote v1 genome

Gene IDSed0002480
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG08:3957233..3957675
RNA-Seq ExpressionSed0002480
SyntenySed0002480
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035091.1 putative transmembrane protein [Cucumis melo var. makuwa]4.6e-2578.08Show/hide
Query:  QMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        +MKG SPA H TEVL+Q KKLPVCP++MA+GGFA+AAT+GYFVLY+KKKPEASALDVAKV  G+STP+NTHPR
Subjt:  QMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
KAG2717864.1 hypothetical protein I3760_03G194000 [Carya illinoinensis]8.1e-2268.92Show/hide
Query:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        + MKG SP  H+TE L+Q +KLP CP++MA+GGFA+ AT+ YF+LYSKKKPEASA+DVAKVA GVS P+NTHPR
Subjt:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
ONH98720.1 hypothetical protein PRUPE_7G263500 [Prunus persica]1.4e-2172.97Show/hide
Query:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        Q MKG SPA H+TEVL+QT K+  CP++MA+GGFA+  TIGYF LY+KKKPEASALDVAKVA G S PENTHPR
Subjt:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
PQP98417.1 hypothetical protein Pyn_22000 [Prunus yedoensis var. nudiflora]3.7e-2274.32Show/hide
Query:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        Q MKG SPA H+TEVL+QT KL  CP++MA+GGFA+  TIGYF LY+KKKPEASALDVAKVA G S PENTHPR
Subjt:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
XP_022134574.1 uncharacterized protein LOC111006810 [Momordica charantia]4.3e-2363Show/hide
Query:  RTPTANNCHMSNPNSTNSPNSPLRQHQQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        R    N    S+  +  +  S +   QQM G SPA H TEVL+Q KKLPVCP+KMAVGGF +AAT+GYFVL +KKKPEASALDVAKV AGV+TPENT PR
Subjt:  RTPTANNCHMSNPNSTNSPNSPLRQHQQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
TrEMBL top hitse value%identityAlignment
A0A314Y3C0 Uncharacterized protein1.8e-2274.32Show/hide
Query:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        Q MKG SPA H+TEVL+QT KL  CP++MA+GGFA+  TIGYF LY+KKKPEASALDVAKVA G S PENTHPR
Subjt:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
A0A5D3BA37 Putative transmembrane protein2.2e-2578.08Show/hide
Query:  QMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        +MKG SPA H TEVL+Q KKLPVCP++MA+GGFA+AAT+GYFVLY+KKKPEASALDVAKV  G+STP+NTHPR
Subjt:  QMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
A0A5E4F6K3 PREDICTED: transmembrane6.7e-2272.97Show/hide
Query:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        Q MKG SPA H+TEVL+QT K+  CP++MA+GGFA+  TIGYF LY+KKKPEASALDVAKVA G S PENTHPR
Subjt:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
A0A6J1BZ44 uncharacterized protein LOC1110068102.1e-2363Show/hide
Query:  RTPTANNCHMSNPNSTNSPNSPLRQHQQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        R    N    S+  +  +  S +   QQM G SPA H TEVL+Q KKLPVCP+KMAVGGF +AAT+GYFVL +KKKPEASALDVAKV AGV+TPENT PR
Subjt:  RTPTANNCHMSNPNSTNSPNSPLRQHQQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
M5VWC6 Uncharacterized protein (Fragment)6.7e-2272.97Show/hide
Query:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
        Q MKG SPA H+TEVL+QT K+  CP++MA+GGFA+  TIGYF LY+KKKPEASALDVAKVA G S PENTHPR
Subjt:  QQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31830.1 unknown protein8.1e-1241.67Show/hide
Query:  MAGLEDLKRTPTANNCHMSNPNSTNSPNSPLRQHQQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVS
        MAG ED ++  TA+   MS   S     + +   ++  GS+P      VL+Q + LP     MA+ G A++  I Y V+Y+KKKPEA+A DVAK A G +
Subjt:  MAGLEDLKRTPTANNCHMSNPNSTNSPNSPLRQHQQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVS

Query:  TPENTHPR
         PE+THPR
Subjt:  TPENTHPR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGTTTGGAGGATTTGAAACGAACTCCAACTGCAAATAACTGCCACATGTCTAATCCCAATTCCACAAACTCCCCAAATTCTCCGCTACGACAACACCAGCAAAT
GAAGGGCTCCTCCCCGGCTCACCACAACACCGAGGTTCTAAACCAGACCAAGAAACTGCCCGTTTGTCCCTTGAAAATGGCGGTGGGCGGTTTCGCCATGGCCGCCACGA
TTGGTTACTTTGTCCTCTACTCCAAGAAGAAGCCCGAGGCCTCCGCCTTAGATGTCGCTAAAGTCGCCGCGGGCGTATCCACTCCCGAGAACACCCATCCTCGCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGTTTGGAGGATTTGAAACGAACTCCAACTGCAAATAACTGCCACATGTCTAATCCCAATTCCACAAACTCCCCAAATTCTCCGCTACGACAACACCAGCAAAT
GAAGGGCTCCTCCCCGGCTCACCACAACACCGAGGTTCTAAACCAGACCAAGAAACTGCCCGTTTGTCCCTTGAAAATGGCGGTGGGCGGTTTCGCCATGGCCGCCACGA
TTGGTTACTTTGTCCTCTACTCCAAGAAGAAGCCCGAGGCCTCCGCCTTAGATGTCGCTAAAGTCGCCGCGGGCGTATCCACTCCCGAGAACACCCATCCTCGCAACTAG
Protein sequenceShow/hide protein sequence
MAGLEDLKRTPTANNCHMSNPNSTNSPNSPLRQHQQMKGSSPAHHNTEVLNQTKKLPVCPLKMAVGGFAMAATIGYFVLYSKKKPEASALDVAKVAAGVSTPENTHPRN