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Sed0002490 (gene) of Chayote v1 genome

Gene IDSed0002490
OrganismSechium edule (Chayote v1)
DescriptionTarget of Myb protein 1-like
Genome locationLG12:11522208..11523254
RNA-Seq ExpressionSed0002490
SyntenySed0002490
Gene Ontology termsGO:0043328 - protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process)
GO:0035091 - phosphatidylinositol binding (molecular function)
GO:0043130 - ubiquitin binding (molecular function)
InterPro domainsIPR002014 - VHS domain
IPR008942 - ENTH/VHS
IPR044836 - TOM1-like protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5031094.1 hypothetical protein JHK85_015076 [Glycine max]7.9e-2146.48Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVV--GTMKSLS----------------TLPLRKIKDVV
        M N +VERATS M++GPDWA N+EICD+++ DPG            I  QI +++D R+        TMK L                 T P    KDVV
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVV--GTMKSLS----------------TLPLRKIKDVV

Query:  KRLKKRLGNKSPKVQLLVPTLLETIIKNCGDISHSHVAEKEI
        K LKKR+G+K P+VQ+L  TLLETIIKNCGDI H HVAE+++
Subjt:  KRLKKRLGNKSPKVQLLVPTLLETIIKNCGDISHSHVAEKEI

KAG5034351.1 hypothetical protein JHK87_009261 [Glycine soja]9.3e-2246.77Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N +VERATS M++GPDWA N+EICD+++ D G+           I  QI +++DG           ++  +   + KDVVK +KKR+G+K P+VQ+L 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEI
         TLLETIIKNCGDI H HVAE+++
Subjt:  PTLLETIIKNCGDISHSHVAEKEI

KAG5147826.1 hypothetical protein JHK82_014707 [Glycine max]7.9e-2146.48Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVV--GTMKSLS----------------TLPLRKIKDVV
        M N +VERATS M++GPDWA N+EICD+++ DPG            I  QI +++D R+        TMK L                 T P    KDVV
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVV--GTMKSLS----------------TLPLRKIKDVV

Query:  KRLKKRLGNKSPKVQLLVPTLLETIIKNCGDISHSHVAEKEI
        K LKKR+G+K P+VQ+L  TLLETIIKNCGDI H HVAE+++
Subjt:  KRLKKRLGNKSPKVQLLVPTLLETIIKNCGDISHSHVAEKEI

KHN18194.1 TOM1-like protein 2 [Glycine soja]6.0e-2148.12Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFS------SICFQIEASIDGRISSHVV---GTMKSLSTLPLRKIKDVVKRLKKRLGN
        M N +VERATS M++GPDWA N+EICD+++ DPG   I + +  +          Q    + GR   HV    G    + T P    KDVVK LKKR+G+
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFS------SICFQIEASIDGRISSHVV---GTMKSLSTLPLRKIKDVVKRLKKRLGN

Query:  KSPKVQLLVPTLLETIIKNCGDISHSHVAEKEI
        K P+VQ+L  TLLETIIKNCGDI H HVAE+++
Subjt:  KSPKVQLLVPTLLETIIKNCGDISHSHVAEKEI

XP_022153782.1 TOM1-like protein 9 [Momordica charantia]2.7e-2149.6Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N MVERATSGM+IGPDWAANLEICD+I+ D G                                          + KDV++ +KKRLG+K+P+VQLLV
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEIP
         TLLET+I NCGDIS+SHVAEK+IP
Subjt:  PTLLETIIKNCGDISHSHVAEKEIP

TrEMBL top hitse value%identityAlignment
A0A0B2QDV9 TOM1-like protein 22.9e-2148.12Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFS------SICFQIEASIDGRISSHVV---GTMKSLSTLPLRKIKDVVKRLKKRLGN
        M N +VERATS M++GPDWA N+EICD+++ DPG   I + +  +          Q    + GR   HV    G    + T P    KDVVK LKKR+G+
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFS------SICFQIEASIDGRISSHVV---GTMKSLSTLPLRKIKDVVKRLKKRLGN

Query:  KSPKVQLLVPTLLETIIKNCGDISHSHVAEKEI
        K P+VQ+L  TLLETIIKNCGDI H HVAE+++
Subjt:  KSPKVQLLVPTLLETIIKNCGDISHSHVAEKEI

A0A1S3CQA8 target of Myb protein 1-like isoform X11.5e-2049.6Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N +VERATS M+IGPDWAAN+EICD+I+ D G                                          + KDVVK +KKRLG+K PKVQLL 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEIP
         TLLETI KNCG+ISH+HVAEKEIP
Subjt:  PTLLETIIKNCGDISHSHVAEKEIP

A0A371FMI9 TOM1-like protein 9 (Fragment)1.1e-2048.39Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N +VERAT+ M++GPDWA N+EICD+++ DPG            I  QI  ++DG          +S + L   + KDVVK ++KRLG+K P+VQLL 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEI
          LLETIIKNCGDI H HVAE+++
Subjt:  PTLLETIIKNCGDISHSHVAEKEI

A0A6J1DJW3 TOM1-like protein 91.3e-2149.6Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N MVERATSGM+IGPDWAANLEICD+I+ D G                                          + KDV++ +KKRLG+K+P+VQLLV
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEIP
         TLLET+I NCGDIS+SHVAEK+IP
Subjt:  PTLLETIIKNCGDISHSHVAEKEIP

A0A7J6HHZ4 Uncharacterized protein3.8e-2148.39Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N MVERATS M+IGPDWA N+EICD+++ DPG                                   L    L + KDVVK +KKR+G+++PKVQLL 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEI
         TLLETIIKNCGDI H HVAEK++
Subjt:  PTLLETIIKNCGDISHSHVAEKEI

SwissProt top hitse value%identityAlignment
O80910 TOM1-like protein 62.8e-1338.21Show/hide
Query:  ANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVP
        A   V++ATS +++GPDW  N+EICD +               +S+ +Q                            KDVVK +KKRL +KS +VQLL  
Subjt:  ANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVP

Query:  TLLETIIKNCGDISHSHVAEKEI
        TLLET++KNCGD  H  VAEK I
Subjt:  TLLETIIKNCGDISHSHVAEKEI

Q6NQK0 TOM1-like protein 41.7e-1037.38Show/hide
Query:  ERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVPTLLET
        ERAT+ M+IGPDWA N+E+CDLI+ DP                                           + K+ VK LKKRLG+K+ KVQ+L    LET
Subjt:  ERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVPTLLET

Query:  IIKNCGD
        + KNCG+
Subjt:  IIKNCGD

Q8L860 TOM1-like protein 91.1e-2044.35Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N MVERATS M+IGPDWA NLEICD++++DP                                           + KDVVK +KKR+G+++PK QLL 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEI
         TLLETI+KNCGD+ H HVAEK +
Subjt:  PTLLETIIKNCGDISHSHVAEKEI

Q9C9Y1 TOM1-like protein 81.4e-1538.71Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M + +V+RATS M+IGPDWA NLEICD+++ +PG                                          + ++VV  +KKRL +++ KVQLL 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEI
         TLLETII NCG++ H  VAEK+I
Subjt:  PTLLETIIKNCGDISHSHVAEKEI

Q9LPL6 TOM1-like protein 37.7e-1133.05Show/hide
Query:  ERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVPTLLET
        ERAT+ M+IGPDWA N+E+CD+I+ +P                                           + K+ VK LKKRLG+K+ KVQ+L    LET
Subjt:  ERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVPTLLET

Query:  IIKNCGDISHSHVAEKEI
        + KNCG+  +  + +++I
Subjt:  IIKNCGDISHSHVAEKEI

Arabidopsis top hitse value%identityAlignment
AT1G21380.1 Target of Myb protein 15.5e-1233.05Show/hide
Query:  ERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVPTLLET
        ERAT+ M+IGPDWA N+E+CD+I+ +P                                           + K+ VK LKKRLG+K+ KVQ+L    LET
Subjt:  ERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVPTLLET

Query:  IIKNCGDISHSHVAEKEI
        + KNCG+  +  + +++I
Subjt:  IIKNCGDISHSHVAEKEI

AT2G38410.1 ENTH/VHS/GAT family protein2.0e-1438.21Show/hide
Query:  ANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVP
        A   V++ATS +++GPDW  N+EICD +               +S+ +Q                            KDVVK +KKRL +KS +VQLL  
Subjt:  ANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVP

Query:  TLLETIIKNCGDISHSHVAEKEI
        TLLET++KNCGD  H  VAEK I
Subjt:  TLLETIIKNCGDISHSHVAEKEI

AT3G08790.1 ENTH/VHS/GAT family protein9.6e-1738.71Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M + +V+RATS M+IGPDWA NLEICD+++ +PG                                          + ++VV  +KKRL +++ KVQLL 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEI
         TLLETII NCG++ H  VAEK+I
Subjt:  PTLLETIIKNCGDISHSHVAEKEI

AT4G32760.1 ENTH/VHS/GAT family protein7.6e-2244.35Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N MVERATS M+IGPDWA NLEICD++++DP                                           + KDVVK +KKR+G+++PK QLL 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEI
         TLLETI+KNCGD+ H HVAEK +
Subjt:  PTLLETIIKNCGDISHSHVAEKEI

AT4G32760.2 ENTH/VHS/GAT family protein7.6e-2244.35Show/hide
Query:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV
        M N MVERATS M+IGPDWA NLEICD++++DP                                           + KDVVK +KKR+G+++PK QLL 
Subjt:  MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLV

Query:  PTLLETIIKNCGDISHSHVAEKEI
         TLLETI+KNCGD+ H HVAEK +
Subjt:  PTLLETIIKNCGDISHSHVAEKEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAATCAGATGGTTGAACGTGCCACCAGCGGTATGGTAATCGGTCCAGACTGGGCCGCCAATTTGGAGATTTGTGATTTGATCGACACAGACCCTGGTTCAGATGA
CATTGTAACCAATATGAAGTTTTCTTCAATATGCTTCCAAATTGAAGCTTCTATTGATGGAAGAATTAGCTCCCACGTTGTGGGTACTATGAAAAGTCTTTCTACACTTC
CATTAAGGAAAATAAAAGATGTTGTTAAAAGATTAAAGAAGCGCCTTGGTAATAAGAGCCCCAAAGTTCAGCTTCTTGTCCCAACACTTTTGGAGACCATCATCAAGAAT
TGTGGGGACATTAGTCATTCGCATGTGGCAGAGAAGGAAATCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAATCAGATGGTTGAACGTGCCACCAGCGGTATGGTAATCGGTCCAGACTGGGCCGCCAATTTGGAGATTTGTGATTTGATCGACACAGACCCTGGTTCAGATGA
CATTGTAACCAATATGAAGTTTTCTTCAATATGCTTCCAAATTGAAGCTTCTATTGATGGAAGAATTAGCTCCCACGTTGTGGGTACTATGAAAAGTCTTTCTACACTTC
CATTAAGGAAAATAAAAGATGTTGTTAAAAGATTAAAGAAGCGCCTTGGTAATAAGAGCCCCAAAGTTCAGCTTCTTGTCCCAACACTTTTGGAGACCATCATCAAGAAT
TGTGGGGACATTAGTCATTCGCATGTGGCAGAGAAGGAAATCCCTTAAGAGATGGTAAAAGTTGTATGGAAGAGGG
Protein sequenceShow/hide protein sequence
MANQMVERATSGMVIGPDWAANLEICDLIDTDPGSDDIVTNMKFSSICFQIEASIDGRISSHVVGTMKSLSTLPLRKIKDVVKRLKKRLGNKSPKVQLLVPTLLETIIKN
CGDISHSHVAEKEIP