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Sed0002511 (gene) of Chayote v1 genome

Gene IDSed0002511
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG08:1972865..1973437
RNA-Seq ExpressionSed0002511
SyntenySed0002511
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587628.1 hypothetical protein SDJN03_16193, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4363.12Show/hide
Query:  MVFSTPDRAPPAKSLT------AGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRR-----AEEDED
        M  STP+R P A S T       GLLRSV  L VLCAKKA  VTKKLK+KP+      P + LARP N LKT+  SA+TL  KKKT RR      ++DE+
Subjt:  MVFSTPDRAPPAKSLT------AGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRR-----AEEDED

Query:  QEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTE
        ++EWG  GVWQRGILMGD+CQPLDF G IYYDSNGNK+NE P RSPRASPLPGYLLRK E
Subjt:  QEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTE

KGN63795.1 hypothetical protein Csa_013677 [Cucumis sativus]1.6e-5268.94Show/hide
Query:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGH--PKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEE
        M+FSTPD  P       AK+ + GL  SV ALA LCAKKA  +TKKLKFKP+ D+P H  P+SPLARP   LKTI QSA++LVHKK+T R  EE+E++EE
Subjt:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGH--PKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEE

Query:  ---WGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP
           WG GGVWQRGILMGD+CQPLDFSGAIYYDSNG KM+EPPLRSPRASPLPGYLLRK++P
Subjt:  ---WGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP

TYK28394.1 hypothetical protein E5676_scaffold629G00220 [Cucumis melo var. makuwa]1.5e-5066.26Show/hide
Query:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEE--
        M+FSTP+  P       A + + GL RS+TALA LCAKKA  +TKKLK KP+ D+P  P+SPLARP   LKTI QSA+ LVHKK+T R+ EE+E++EE  
Subjt:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEE--

Query:  -----WGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP
             WG GGVWQRGILMGD+CQPLDFSGAIYYDSNG+KM+EPPLRSPRASPLPGYLLRK++P
Subjt:  -----WGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP

XP_023531310.1 uncharacterized protein LOC111793589 [Cucurbita pepo subsp. pepo]1.0e-4363.12Show/hide
Query:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRA-----EEDED
        M  STP+R P         SL  GLLRSV  L VLCAKKA  VTKKLK+KP+      P + LARP N LKT+  SA+TL  KKKT RR      E+DE+
Subjt:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRA-----EEDED

Query:  QEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTE
        ++EWG  GVWQRGILMGD+CQPLDF G IYYDSNGNK+NE P RSPRASPLPGYLLRK E
Subjt:  QEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTE

XP_038879173.1 uncharacterized protein LOC120071149 [Benincasa hispida]7.2e-5373.72Show/hide
Query:  MVFSTP------DRAPPAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGH--PKSPLARPMNKLKTIGQSAVTLVHKKKTDRR-AEEDEDQE
        MVFSTP      D    AK+ + GL RSVTALAV CAKKA  VTKKLK KP+H +P H  PKSPLA P   LKTI QSA++LV KKKT RR  EEDE++E
Subjt:  MVFSTP------DRAPPAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGH--PKSPLARPMNKLKTIGQSAVTLVHKKKTDRR-AEEDEDQE

Query:  EWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRK
        EWG GGVWQRGILMGD+CQPL+FSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRK
Subjt:  EWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRK

TrEMBL top hitse value%identityAlignment
A0A0A0LPH9 Uncharacterized protein7.8e-5368.94Show/hide
Query:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGH--PKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEE
        M+FSTPD  P       AK+ + GL  SV ALA LCAKKA  +TKKLKFKP+ D+P H  P+SPLARP   LKTI QSA++LVHKK+T R  EE+E++EE
Subjt:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGH--PKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEE

Query:  ---WGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP
           WG GGVWQRGILMGD+CQPLDFSGAIYYDSNG KM+EPPLRSPRASPLPGYLLRK++P
Subjt:  ---WGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP

A0A5D3DXW4 Uncharacterized protein7.3e-5166.26Show/hide
Query:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEE--
        M+FSTP+  P       A + + GL RS+TALA LCAKKA  +TKKLK KP+ D+P  P+SPLARP   LKTI QSA+ LVHKK+T R+ EE+E++EE  
Subjt:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEE--

Query:  -----WGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP
             WG GGVWQRGILMGD+CQPLDFSGAIYYDSNG+KM+EPPLRSPRASPLPGYLLRK++P
Subjt:  -----WGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP

A0A6J1C108 uncharacterized protein LOC1110073691.3e-3959.74Show/hide
Query:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEEWG
        M FST +R P       AKS + GLL S+TAL       A ++++KL+ K A  +   P+SPLARP + LKTI QSA+TLVHKKK+  + + DE++EEWG
Subjt:  MVFSTPDRAP------PAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEEWG

Query:  HGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKT
        HGGVWQR ILMGD+CQPLDFSGAIYYD+ GNKM++ P RSPRASPLP YLL KT
Subjt:  HGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKT

A0A6J1EZ09 uncharacterized protein LOC1114408466.6e-4463.12Show/hide
Query:  MVFSTPDRAPPAKSLT------AGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRR-----AEEDED
        M  STP+R P A S T       GLLRSV  L VLCAKKA  VTKKLK+KP+      P + LARP N LKT+  SA+TL  KKKT RR      ++DE+
Subjt:  MVFSTPDRAPPAKSLT------AGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRR-----AEEDED

Query:  QEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTE
        ++EWG  GVWQRGILMGD+CQPLDF G IYYDSNGNK+NE P RSPRASPLPGYLLRK E
Subjt:  QEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTE

A0A6J1I8S7 uncharacterized protein LOC1114725192.5e-4362.5Show/hide
Query:  MVFSTPDRAPPAKSLT------AGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRA-----EEDED
        M   TP+R P A S T       GLLRSV  L VLCAKKA  +TKKLK+KP+      P + LARP + LKTI  SA+TL  KKKT RR      E+DE+
Subjt:  MVFSTPDRAPPAKSLT------AGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRA-----EEDED

Query:  QEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTE
        ++EWG  GVWQRGILMGD+CQPLDF G IYYDSNGNK+NE P RSPRASPLPGYLLRK E
Subjt:  QEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein1.5e-1937.74Show/hide
Query:  STPDR--APPAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHD--------------NPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEED
        STP+   +P  K L+   L    ++ VLCA+ A +++KKLK K                  N         RP     T+   A+T+V +K         
Subjt:  STPDR--APPAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHD--------------NPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEED

Query:  EDQEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLR
         ++E     G+WQR ILMG +C+PLDFSG IYYDSNG  +NE P RSPR +PLP Y  R
Subjt:  EDQEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLR

AT1G71740.1 unknown protein1.3e-0448.72Show/hide
Query:  GGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRS
        G +WQ+ ILMG +CQ  DFSG I YD++G  +  PP ++
Subjt:  GGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRS

AT3G14760.1 unknown protein3.9e-0450Show/hide
Query:  VWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLR
        VWQR ILMG++C+   FSG I YD  G+  + P L+
Subjt:  VWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLR

AT3G18560.1 unknown protein2.6e-1635.2Show/hide
Query:  STPDRAPPA-KSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHD-----------------------------NPGHPKSPL-ARPMNKLKTIGQSAV
        STP+    A K ++   L    +L VLCA+ A +V+KKLK K                                 +P    SP+  RP     T+   A+
Subjt:  STPDRAPPA-KSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHD-----------------------------NPGHPKSPL-ARPMNKLKTIGQSAV

Query:  TLVHKKK-------TDRRAEE---DEDQEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLP
        T+V +K        T + A E   +ED+EE+   GVWQR ILMG +C+PLD+SG IYYD +G+++ + P RSPRAS +P
Subjt:  TLVHKKK-------TDRRAEE---DEDQEEWGHGGVWQRGILMGDRCQPLDFSGAIYYDSNGNKMNEPPLRSPRASPLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTTCTCCACGCCGGACCGTGCTCCGCCAGCCAAGAGCTTAACCGCCGGTCTGCTCCGGTCCGTCACAGCTCTGGCGGTTCTCTGCGCCAAAAAAGCCGGCCAAGT
CACCAAGAAGCTTAAGTTCAAGCCGGCCCACGACAACCCGGGTCACCCGAAATCGCCGTTGGCTCGGCCGATGAACAAGCTGAAGACGATAGGCCAATCGGCTGTTACTT
TGGTTCACAAGAAAAAAACCGACCGTCGAGCCGAGGAGGATGAAGATCAAGAAGAGTGGGGCCACGGTGGCGTTTGGCAGAGAGGGATCTTGATGGGCGACAGATGTCAG
CCGTTGGATTTCTCGGGTGCAATTTATTACGATAGTAACGGCAACAAGATGAACGAGCCTCCTCTCCGTTCGCCACGTGCCAGTCCTTTACCCGGTTACCTTCTTAGAAA
AACCGAACCTTGA
mRNA sequenceShow/hide mRNA sequence
CTCAATTCCCTCTAAATTAATAATGGTCTTCTCCACGCCGGACCGTGCTCCGCCAGCCAAGAGCTTAACCGCCGGTCTGCTCCGGTCCGTCACAGCTCTGGCGGTTCTCT
GCGCCAAAAAAGCCGGCCAAGTCACCAAGAAGCTTAAGTTCAAGCCGGCCCACGACAACCCGGGTCACCCGAAATCGCCGTTGGCTCGGCCGATGAACAAGCTGAAGACG
ATAGGCCAATCGGCTGTTACTTTGGTTCACAAGAAAAAAACCGACCGTCGAGCCGAGGAGGATGAAGATCAAGAAGAGTGGGGCCACGGTGGCGTTTGGCAGAGAGGGAT
CTTGATGGGCGACAGATGTCAGCCGTTGGATTTCTCGGGTGCAATTTATTACGATAGTAACGGCAACAAGATGAACGAGCCTCCTCTCCGTTCGCCACGTGCCAGTCCTT
TACCCGGTTACCTTCTTAGAAAAACCGAACCTTGAAACCGGCTCCCAAACAGTGATTTTTTTTTTAATTATTTTTTTCCCCACTTATATTTCTGTAGAATTTAAAATATT
TTGTGTTCTTGAGGTTGCTTGTA
Protein sequenceShow/hide protein sequence
MVFSTPDRAPPAKSLTAGLLRSVTALAVLCAKKAGQVTKKLKFKPAHDNPGHPKSPLARPMNKLKTIGQSAVTLVHKKKTDRRAEEDEDQEEWGHGGVWQRGILMGDRCQ
PLDFSGAIYYDSNGNKMNEPPLRSPRASPLPGYLLRKTEP