; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002517 (gene) of Chayote v1 genome

Gene IDSed0002517
OrganismSechium edule (Chayote v1)
DescriptionTranspos_assoc domain-containing protein
Genome locationLG03:12541835..12545623
RNA-Seq ExpressionSed0002517
SyntenySed0002517
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055179.1 uncharacterized protein E6C27_scaffold80G00030 [Cucumis melo var. makuwa]8.7e-1959.15Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLW
        MF+K WVHLNRATDEYM+G   F+++VKK   + + ++CP KDCRNM H    +++EHLVIKGMDPTY +W
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLW

KAA0056266.1 uncharacterized protein E6C27_scaffold226G00340 [Cucumis melo var. makuwa]7.1e-2159.21Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGE
        MF K WVHLNRAT+EY+ GA +F+++V+      +K+ CPCK CRNM H    +++EHLVIKGMDPTY  WYHHGE
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGE

KAF4380758.1 hypothetical protein F8388_017112 [Cannabis sativa]1.0e-1953.95Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGE
        MFDK+W+  NRA++EY EGAR+F++ ++K      K+LCPCK CRN+ H  + +++EHLVI G+DPTY +W+HHGE
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGE

KAF7148012.1 hypothetical protein RHSIM_Rhsim03G0123300 [Rhododendron simsii]1.1e-1846.02Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGEVCEEDEVENEVDDTFIDSMVDNEP
        M DK WV L R+TDEYM  A +F++   +   N  K+LCPCKDCRN+ H  L+ ++EHLVIKGMDPTY  W+HHGE      VEN  +       V+   
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGEVCEEDEVENEVDDTFIDSMVDNEP

Query:  ILNMFEEIDENDE
          N++    E DE
Subjt:  ILNMFEEIDENDE

KGN47253.1 hypothetical protein Csa_017000 [Cucumis sativus]1.2e-2361.63Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHG-EVCEEDEVEN
        MF+K WVHLNRATDEYM+GA  F+++VKK     + ++CPCKDCR+M H    I++EHLVIKGMDPTY + YHHG EVC ++EVE+
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHG-EVCEEDEVEN

TrEMBL top hitse value%identityAlignment
A0A0A0KCH8 Transpos_assoc domain-containing protein5.7e-2461.63Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHG-EVCEEDEVEN
        MF+K WVHLNRATDEYM+GA  F+++VKK     + ++CPCKDCR+M H    I++EHLVIKGMDPTY + YHHG EVC ++EVE+
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHG-EVCEEDEVEN

A0A5A7UNZ2 Uncharacterized protein4.2e-1959.15Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLW
        MF+K WVHLNRATDEYM+G   F+++VKK   + + ++CP KDCRNM H    +++EHLVIKGMDPTY +W
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLW

A0A5A7UPM1 Uncharacterized protein3.4e-2159.21Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGE
        MF K WVHLNRAT+EY+ GA +F+++V+      +K+ CPCK CRNM H    +++EHLVIKGMDPTY  WYHHGE
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGE

A0A7J6GD52 Transpos_assoc domain-containing protein5.0e-2053.95Show/hide
Query:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGE
        MFDK+W+  NRA++EY EGAR+F++ ++K      K+LCPCK CRN+ H  + +++EHLVI G+DPTY +W+HHGE
Subjt:  MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGE

A0A7J6HCI6 Transpos_assoc domain-containing protein3.7e-1549.33Show/hide
Query:  RATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGEVC-EEDEVE
        RA++EY EGAR+F++ ++K      K+LCPCK CRN+ H  + +++EHLVI G+DPTY +W+HHGE     D++E
Subjt:  RATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGEVC-EEDEVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGACAAAGCTTGGGTGCATTTAAATCGTGCTACTGATGAATACATGGAAGGAGCGAGGAATTTTCTACAAGAAGTAAAGAAAAGGAAGCCAAATGCCAATAAAAT
GTTATGTCCGTGTAAGGATTGTAGAAATATGAAACATTTTGATCTTCAAATCATACACGAGCACTTGGTCATCAAGGGAATGGACCCTACATACAATCTTTGGTATCATC
ATGGAGAAGTATGTGAGGAAGATGAAGTCGAAAATGAAGTTGATGATACTTTTATTGATAGTATGGTTGATAATGAACCAATTCTTAATATGTTTGAAGAGATTGATGAA
AATGATGAGCTTACTTATGCAAGACAAGATTGTGAGGAGGTTTACATATCTATCATGTTTCAGATCATATCTTCTAAGTATACTTCATTCGATAAACCTCTTCTACAATG
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGACAAAGCTTGGGTGCATTTAAATCGTGCTACTGATGAATACATGGAAGGAGCGAGGAATTTTCTACAAGAAGTAAAGAAAAGGAAGCCAAATGCCAATAAAAT
GTTATGTCCGTGTAAGGATTGTAGAAATATGAAACATTTTGATCTTCAAATCATACACGAGCACTTGGTCATCAAGGGAATGGACCCTACATACAATCTTTGGTATCATC
ATGGAGAAGTATGTGAGGAAGATGAAGTCGAAAATGAAGTTGATGATACTTTTATTGATAGTATGGTTGATAATGAACCAATTCTTAATATGTTTGAAGAGATTGATGAA
AATGATGAGCTTACTTATGCAAGACAAGATTGTGAGGAGGTTTACATATCTATCATGTTTCAGATCATATCTTCTAAGTATACTTCATTCGATAAACCTCTTCTACAATG
GTGA
Protein sequenceShow/hide protein sequence
MFDKAWVHLNRATDEYMEGARNFLQEVKKRKPNANKMLCPCKDCRNMKHFDLQIIHEHLVIKGMDPTYNLWYHHGEVCEEDEVENEVDDTFIDSMVDNEPILNMFEEIDE
NDELTYARQDCEEVYISIMFQIISSKYTSFDKPLLQW