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Sed0002539 (gene) of Chayote v1 genome

Gene IDSed0002539
OrganismSechium edule (Chayote v1)
Description54S ribosomal protein L51, mitochondrial
Genome locationLG12:3485709..3489411
RNA-Seq ExpressionSed0002539
SyntenySed0002539
Gene Ontology termsGO:0032543 - mitochondrial translation (biological process)
GO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR007741 - Ribosomal protein/NADH dehydrogenase domain
IPR036249 - Thioredoxin-like superfamily
IPR039927 - 39S ribosomal protein L43/54S ribosomal protein L51


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029113.1 mrpl51 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-5488.24Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMD +LP FK+KNPQLEVV ELIRGQHPHLKAFYKN NQRVVCV+NLD E I+L ATRLRNALGRKVIKL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTKNPSVQGTW T VRF
Subjt:  RHVTKNPSVQGTWNTGVRF

XP_022158383.1 54S ribosomal protein L51, mitochondrial [Momordica charantia]2.2e-5792.44Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMD +LP FKEKNPQLEVVTELIRGQHPHLKAFYKN N+RVVCVKNLDPE INL A RLRNALGRKVIKLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTKNPSVQGTWNT VRF
Subjt:  RHVTKNPSVQGTWNTGVRF

XP_022979453.1 54S ribosomal protein L51, mitochondrial-like [Cucurbita maxima]3.9e-5484.87Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQL+KLIVSYCDWGGSSRGIRAFMD ELP F+EKNPQL++VTELIRGQHPHLK FYK+ N RV+CVKN+DPE I+L ATRLRNALGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTKNPS QGTWNT VRF
Subjt:  RHVTKNPSVQGTWNTGVRF

XP_028084137.1 54S ribosomal protein L51, mitochondrial isoform X2 [Camellia sinensis]3.9e-5488.24Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFM+  LP FKE NPQLEVVTELIRGQHPHLK FYKNKNQRVVCVKNL PE I LQATRLRNALGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWNTGVRF

XP_028763295.1 54S ribosomal protein L51, mitochondrial [Prosopis alba]2.3e-5487.39Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFM+ +LP FKE+NPQLEVVTELIRGQHPHLK FYKNKNQRVVCVKN+DP+ I L ATRLRNALGRKVIKLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWNTGVRF

TrEMBL top hitse value%identityAlignment
A0A1U8IMF4 54S ribosomal protein L51, mitochondrial-like isoform X24.3e-5486.55Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQL+KLIVSYCDWGGSSRGIRAFM+ ELPTFKEKNPQLEVVTELIRGQHPHLK FYKNKN+RVVCVKN+ PE I L ATRLRNALGRKV+KL+T
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWNTGVRF

A0A445AZB2 L51_S25_CI-B8 domain-containing protein3.3e-5486.55Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYC+WGGSSRGIRAFM+ ELP FKEKNPQLEVVTELIRGQHPHLKAFYKNKN+RV+CVKN+DPE +   ATRLRNALGRKVIKLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTK PSVQGTW T +RF
Subjt:  RHVTKNPSVQGTWNTGVRF

A0A6J1DVX7 54S ribosomal protein L51, mitochondrial1.1e-5792.44Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFMD +LP FKEKNPQLEVVTELIRGQHPHLKAFYKN N+RVVCVKNLDPE INL A RLRNALGRKVIKLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTKNPSVQGTWNT VRF
Subjt:  RHVTKNPSVQGTWNTGVRF

A0A6J1IW90 54S ribosomal protein L51, mitochondrial-like1.9e-5484.87Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQL+KLIVSYCDWGGSSRGIRAFMD ELP F+EKNPQL++VTELIRGQHPHLK FYK+ N RV+CVKN+DPE I+L ATRLRNALGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTKNPS QGTWNT VRF
Subjt:  RHVTKNPSVQGTWNTGVRF

A0A7J7HDQ5 L51_S25_CI-B8 domain-containing protein1.9e-5488.24Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQLQKLIVSYCDWGGSSRGIRAFM+  LP FKE NPQLEVVTELIRGQHPHLK FYKNKNQRVVCVKNL PE I LQATRLRNALGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWNTGVRF

SwissProt top hitse value%identityAlignment
Q06090 54S ribosomal protein L51, mitochondrial6.2e-1032.17Show/hide
Query:  VWQLQKLIVSYCDWGGSSRGIRAFM-DKELPTFKEKNP--QLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRH
        V+  +K+ + +C+WGGSS G+R F+  K L  + ++ P  Q EV+    +  HP L+A Y N  ++V+CV+NL+ + +  +   L+++ G  +++ RT++
Subjt:  VWQLQKLIVSYCDWGGSSRGIRAFM-DKELPTFKEKNP--QLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRH

Query:  ---VTKNPSVQGTWN
            + N SV+G W+
Subjt:  ---VTKNPSVQGTWN

Q758S3 54S ribosomal protein L51, mitochondrial3.0e-1234.19Show/hide
Query:  VWQLQKLIVSYCDWGGSSRGIRAFM-DKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVT
        ++  +K+ + YC+WGGSS+G+R F+  K L  + EK PQ++    + +  HP LKA Y N   + +CV+NL+ + + L+   LR + G ++     RH  
Subjt:  VWQLQKLIVSYCDWGGSSRGIRAFM-DKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVT

Query:  K-------NPSVQGTWN
        K       N SV+G W+
Subjt:  K-------NPSVQGTWN

Q8N983 39S ribosomal protein L43, mitochondrial7.6e-0833.33Show/hide
Query:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHV
        R V QLQ+L  S    G SSRG R F+++E+  F  +NP + +         P + A Y N   R   +     E I+    +L +  G  VI++R    
Subjt:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHV

Query:  TKNPSVQGTWN
        T NPS+QG W+
Subjt:  TKNPSVQGTWN

Q99N89 39S ribosomal protein L43, mitochondrial5.8e-0834.55Show/hide
Query:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHV
        R V QLQ+L +S      SSRG R F+++E+  F  +NP + V         P + A Y N   R   V +   E I     +L +  G  VI++R    
Subjt:  RGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHV

Query:  TKNPSVQGTW
        T NPS+QG W
Subjt:  TKNPSVQGTW

Q9UUC8 54S ribosomal protein L51, mitochondrial8.7e-1228.57Show/hide
Query:  QKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSV
        +++  SYC+WGGSS+G++ F+  +L +  +++  +E      +G+HP ++A+Y    ++V+C + +    I  +A   R++ G K   ++    + NPSV
Subjt:  QKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSV

Query:  QGTWN
        +G W+
Subjt:  QGTWN

Arabidopsis top hitse value%identityAlignment
AT3G59650.1 mitochondrial ribosomal protein L51/S25/CI-B8 family protein7.2e-5478.15Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT
        MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+ ELP  KEKNPQLEV+TEL RGQHP+LK  Y+N+N+RVVCVKN+DPE + L ATRLRN+LGRKV+KLRT
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRT

Query:  RHVTKNPSVQGTWNTGVRF
        RHVTK+PSVQGTW T V+F
Subjt:  RHVTKNPSVQGTWNTGVRF

AT3G59650.2 mitochondrial ribosomal protein L51/S25/CI-B8 family protein3.1e-4963.7Show/hide
Query:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYK---------------------------NKNQRVVCVK
        MALRGVWQL+KL+VSYC+WGGSSRGIRAFM+ ELP  KEKNPQLEV+TEL RGQHP+LK  Y                            N+N+RVVCVK
Subjt:  MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYK---------------------------NKNQRVVCVK

Query:  NLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF
        N+DPE + L ATRLRN+LGRKV+KLRTRHVTK+PSVQGTW T V+F
Subjt:  NLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQGTWNTGVRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGCGAGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGAGGAAGCAGTAGGGGTATCAGGGCATTTATGGACAAGGAATTGCCAACTTT
CAAGGAGAAGAATCCTCAGCTCGAAGTCGTTACTGAACTCATTCGCGGCCAGCATCCACACCTGAAGGCCTTCTATAAAAACAAGAATCAACGGGTGGTATGCGTGAAGA
ATTTGGATCCGGAAATCATAAATTTGCAGGCAACGAGGCTAAGGAACGCATTGGGGCGAAAGGTCATAAAACTGAGGACGAGACATGTAACCAAAAACCCGAGCGTGCAA
GGTACGTGGAACACTGGTGTAAGATTTTGA
mRNA sequenceShow/hide mRNA sequence
GACATAGCAAACCTCAATCGCTAAAACCCGTCTCACTCTCGAGCCTTAGTCGGCGTTGGTGTATCGTGGGTGGCCGCATCCTCCGTTTCAGATATAAAGATGGCTTTGCG
AGGTGTATGGCAGCTTCAGAAGCTGATTGTCAGCTATTGTGATTGGGGAGGAAGCAGTAGGGGTATCAGGGCATTTATGGACAAGGAATTGCCAACTTTCAAGGAGAAGA
ATCCTCAGCTCGAAGTCGTTACTGAACTCATTCGCGGCCAGCATCCACACCTGAAGGCCTTCTATAAAAACAAGAATCAACGGGTGGTATGCGTGAAGAATTTGGATCCG
GAAATCATAAATTTGCAGGCAACGAGGCTAAGGAACGCATTGGGGCGAAAGGTCATAAAACTGAGGACGAGACATGTAACCAAAAACCCGAGCGTGCAAGGTACGTGGAA
CACTGGTGTAAGATTTTGAGGCCTGGATGATTCCCTGAAGTGCTGGATTTTGTTTTGAGGTTGTTTTTTTTCAATCAACAATAAGATGTTGAAACCAGACTAATATATAG
AGTAGTTTGAGTCTGTTGTCCCATGCAAACTTTTTTGGTTGTTATTGTTCCAATGCTCTGCATACTCTCTCTGAAGAAAGTCTTACTGAGAAACATGCAACAGAAGAAAG
TCTTACTGAGAAACATGCAACA
Protein sequenceShow/hide protein sequence
MALRGVWQLQKLIVSYCDWGGSSRGIRAFMDKELPTFKEKNPQLEVVTELIRGQHPHLKAFYKNKNQRVVCVKNLDPEIINLQATRLRNALGRKVIKLRTRHVTKNPSVQ
GTWNTGVRF