; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002545 (gene) of Chayote v1 genome

Gene IDSed0002545
OrganismSechium edule (Chayote v1)
DescriptionPhloem filament protein
Genome locationLG09:4745126..4745567
RNA-Seq ExpressionSed0002545
SyntenySed0002545
Gene Ontology termsNA
InterPro domainsIPR009994 - Phloem filament PP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588835.1 hypothetical protein SDJN03_17400, partial [Cucurbita argyrosperma subsp. sororia]9.2e-0734.74Show/hide
Query:  DIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAA--LNRMAFREFEAIVHDEDCDSGKLWEAISFV
        ++V +WI +  V+   +Q +A+FAV+K     G    Y   + GWY +L  N +KYRLH+ A   L R+    +E +V +E  D  ++ + ISFV
Subjt:  DIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAA--LNRMAFREFEAIVHDEDCDSGKLWEAISFV

KAG6588840.1 hypothetical protein SDJN03_17405, partial [Cucurbita argyrosperma subsp. sororia]6.0e-0641.67Show/hide
Query:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIV
        +WI + +V  P VQ LA+FAV +H   +G    Y E Y GW+  L  + IK+RLHL A       R +EA+V
Subjt:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIV

XP_022927698.1 uncharacterized protein LOC111434515 [Cucurbita moschata]6.0e-0641.67Show/hide
Query:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIV
        +WI + +V  P VQ LA+FAV +H   +G    Y E Y GW+  L  + IK+RLHL A       R +EA+V
Subjt:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIV

XP_022927699.1 uncharacterized protein LOC111434517 [Cucurbita moschata]9.2e-0734.74Show/hide
Query:  DIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAA--LNRMAFREFEAIVHDEDCDSGKLWEAISFV
        ++V +WI +  V+   +Q +A+FAV+K     G    Y   + GWY +L  N +KYRLH+ A   L R+    +E +V +E  D  ++ + ISFV
Subjt:  DIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAA--LNRMAFREFEAIVHDEDCDSGKLWEAISFV

XP_023530188.1 uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo]2.7e-0634.74Show/hide
Query:  DIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAA--LNRMAFREFEAIVHDEDCDSGKLWEAISFV
        ++V +WI +  V    +Q +A+FAV+K     G    +   + GWY +L  N +KYRLH+ A   L R+    +EA+V +E  D  ++ + ISFV
Subjt:  DIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAA--LNRMAFREFEAIVHDEDCDSGKLWEAISFV

TrEMBL top hitse value%identityAlignment
A0A6J1EIQ8 uncharacterized protein LOC1114345174.5e-0734.74Show/hide
Query:  DIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAA--LNRMAFREFEAIVHDEDCDSGKLWEAISFV
        ++V +WI +  V+   +Q +A+FAV+K     G    Y   + GWY +L  N +KYRLH+ A   L R+    +E +V +E  D  ++ + ISFV
Subjt:  DIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAA--LNRMAFREFEAIVHDEDCDSGKLWEAISFV

A0A6J1ELQ9 uncharacterized protein LOC1114345152.9e-0641.67Show/hide
Query:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIV
        +WI + +V  P VQ LA+FAV +H   +G    Y E Y GW+  L  + IK+RLHL A       R +EA+V
Subjt:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIV

A0A6J1JG70 uncharacterized protein LOC111486626 isoform X22.4e-0543.06Show/hide
Query:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIV
        +WI + +V  P VQ LA+FAV +H  N   L  Y E Y GW+  L  + IK+RLHL A       R +EA+V
Subjt:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIV

A0A6J1JKF7 uncharacterized protein LOC111486626 isoform X18.4e-0638.38Show/hide
Query:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIVHDED--------CDSGKLWEAISFVPK
        +WI + +V  P VQ LA+FAV +H  N   L  Y E Y GW+  L  + IK+RLHL A       R +EA+V  E          +S KL   + F PK
Subjt:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIVHDED--------CDSGKLWEAISFVPK

P94012 Phloem filament protein8.4e-0638.38Show/hide
Query:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIVHDED--------CDSGKLWEAISFVPK
        +WI + +V  P VQ LA+FAV +H  N   L  Y E Y GW+  L  + IK+RLHL A       R +EA+V  E          +S KL   + F PK
Subjt:  EWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIVHDED--------CDSGKLWEAISFVPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTACACAAGATATCGTAGTCGAATGGATACCTGTGTGTAGTGTTGATGAGCCATACGTGCAAGCGCTTGCAAGGTTTGCAGTTAAGAAGCACGTAGGAAATGC
TGGTAGACTATGGACTTACGGTGAAACTTATGCAGGGTGGTATCAACAGTTAGATGGAAACAAAATCAAGTATCGCCTTCATCTTTCTGCCGCTCTCAATCGGATGGCTT
TTCGAGAATTCGAGGCTATTGTTCACGATGAAGACTGCGACTCTGGAAAACTTTGGGAGGCCATATCTTTTGTTCCAAAAGCTGAAATTAACTGA
mRNA sequenceShow/hide mRNA sequence
CTTGTTTTCTCCATATTGTATCAAAAGTAGCTATGAGTTCTACACAAGATATCGTAGTCGAATGGATACCTGTGTGTAGTGTTGATGAGCCATACGTGCAAGCGCTTGCA
AGGTTTGCAGTTAAGAAGCACGTAGGAAATGCTGGTAGACTATGGACTTACGGTGAAACTTATGCAGGGTGGTATCAACAGTTAGATGGAAACAAAATCAAGTATCGCCT
TCATCTTTCTGCCGCTCTCAATCGGATGGCTTTTCGAGAATTCGAGGCTATTGTTCACGATGAAGACTGCGACTCTGGAAAACTTTGGGAGGCCATATCTTTTGTTCCAA
AAGCTGAAATTAACTGAAAAAAATGTCCCTTTGTATCATGATTGTGTTATGTGTAAAACTATATATCTAAAAATAGATAACTAAATAAAATATTTTAAATGAAAGAAGTT
TT
Protein sequenceShow/hide protein sequence
MSSTQDIVVEWIPVCSVDEPYVQALARFAVKKHVGNAGRLWTYGETYAGWYQQLDGNKIKYRLHLSAALNRMAFREFEAIVHDEDCDSGKLWEAISFVPKAEIN