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Sed0002565 (gene) of Chayote v1 genome

Gene IDSed0002565
OrganismSechium edule (Chayote v1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationLG05:1267210..1269819
RNA-Seq ExpressionSed0002565
SyntenySed0002565
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606306.1 hypothetical protein SDJN03_03623, partial [Cucurbita argyrosperma subsp. sororia]1.7e-5082.84Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI
        MEEAKEILKDNRIEDISWLCSLSESELD LISIKM+VLQRAKVIGHE+LAEKF+LK LRA+GF+LMEHLKGQL  +GV DQSQ +ALNGSN LDSSL+K+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL
        LSID+IMA ICSERRKKPGKR R K DSRPK +L
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL

XP_022156102.1 uncharacterized protein LOC111023068 [Momordica charantia]3.5e-5184.96Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLRAG-VSDQSQSAALNGSNFLDSSLDKI
        MEEAKEILKDNRIED+SWLCSLSESELDMLISIKM+VLQRAK+IGHE LAEKF+LK LRAIGF LMEHLKGQLRA  V DQSQSAALNG N LD SL+KI
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLRAG-VSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNE
        LSIDEIMA +CS+RRKKPGKRPR+K DSR KNE
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNE

XP_022931147.1 uncharacterized protein LOC111437414 [Cucurbita moschata]3.9e-5082.84Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI
        MEEAKEILKDNRIEDISWLCSLSESELD LISIKM+VLQRAKVIGHE+LAEKF+LK LRAIGF+LMEHLKGQL  +GV DQSQ +ALNGSN LDSSL+K+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL
        LSID+IMA IC ERRKKPGKR R K DSRPK +L
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL

XP_022995750.1 uncharacterized protein LOC111491189 [Cucurbita maxima]1.5e-4982.09Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI
        MEEAKEILKDNRIEDISWLCSLSESELD LISIKM+VLQRAKVIGHE+LAEKF+LK LRA+GF+LMEHLKGQL  + V DQSQ +ALNGSN LDSSL+KI
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL
        LSID+IMA ICSERRKKPGKR R K DSRP+ +L
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL

XP_023533769.1 uncharacterized protein LOC111795522 [Cucurbita pepo subsp. pepo]7.8e-5184.33Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI
        MEEAKEILKDNRIEDISWLCSLSESELD LISIKM+VLQRAKVIGHE+LAEKF+LK LRAIGF+LMEHLKGQL  +GV DQSQ +ALNGSN LDSSL+KI
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL
        LSID+IMA ICSERRKKPGKR R K DSRPK +L
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL

TrEMBL top hitse value%identityAlignment
A0A0A0KW48 Uncharacterized protein9.0e-4580.15Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI
        MEEA EILK+ RIE ISWLCSLSESELD+LISIKM+VLQRAK +GHE LAEKF+LKM RAIGFVLMEHLKG+LR + VSD SQS ALN  N LDS+L+KI
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPK
        LSIDEIMA ICS+RRKKPGKRP+EKVDSR K
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPK

A0A1S3BQH9 uncharacterized protein LOC1034924131.2e-4480.65Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI
        MEEA EILK+NR+EDISWLCSLSESELD+LISIKM+VLQRAK IGHE LAEKF+LK LRAIGFVLMEHLKG+LR + VSD SQSA LN  N LDS+++KI
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPRE
        LSIDEIMA ICS+RRKKPGKRPR+
Subjt:  LSIDEIMAMICSERRKKPGKRPRE

A0A6J1DR49 uncharacterized protein LOC1110230681.7e-5184.96Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLRAG-VSDQSQSAALNGSNFLDSSLDKI
        MEEAKEILKDNRIED+SWLCSLSESELDMLISIKM+VLQRAK+IGHE LAEKF+LK LRAIGF LMEHLKGQLRA  V DQSQSAALNG N LD SL+KI
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLRAG-VSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNE
        LSIDEIMA +CS+RRKKPGKRPR+K DSR KNE
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNE

A0A6J1ESQ9 uncharacterized protein LOC1114374141.9e-5082.84Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI
        MEEAKEILKDNRIEDISWLCSLSESELD LISIKM+VLQRAKVIGHE+LAEKF+LK LRAIGF+LMEHLKGQL  +GV DQSQ +ALNGSN LDSSL+K+
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL
        LSID+IMA IC ERRKKPGKR R K DSRPK +L
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL

A0A6J1K2S6 uncharacterized protein LOC1114911897.1e-5082.09Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI
        MEEAKEILKDNRIEDISWLCSLSESELD LISIKM+VLQRAKVIGHE+LAEKF+LK LRA+GF+LMEHLKGQL  + V DQSQ +ALNGSN LDSSL+KI
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR-AGVSDQSQSAALNGSNFLDSSLDKI

Query:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL
        LSID+IMA ICSERRKKPGKR R K DSRP+ +L
Subjt:  LSIDEIMAMICSERRKKPGKRPREKVDSRPKNEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component1.2e-2546.03Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSSL
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K + +QRAK+ GH+ELA+KF+LK+LR++G VLMEH + +++       S   Q   L+  N L + +
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSSL

Query:  DKILSIDEIMAMICSERRKKPGKRPR
        D  + I+EI+  IC  + KK  ++ R
Subjt:  DKILSIDEIMAMICSERRKKPGKRPR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component1.2e-2546.03Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSSL
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K + +QRAK+ GH+ELA+KF+LK+LR++G VLMEH + +++       S   Q   L+  N L + +
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSSL

Query:  DKILSIDEIMAMICSERRKKPGKRPR
        D  + I+EI+  IC  + KK  ++ R
Subjt:  DKILSIDEIMAMICSERRKKPGKRPR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component1.2e-2546.03Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSSL
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K + +QRAK+ GH+ELA+KF+LK+LR++G VLMEH + +++       S   Q   L+  N L + +
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSSL

Query:  DKILSIDEIMAMICSERRKKPGKRPR
        D  + I+EI+  IC  + KK  ++ R
Subjt:  DKILSIDEIMAMICSERRKKPGKRPR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown2.1e-2246.09Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEEL-AEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSS
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K +V++RAKV G E+L A+KF+LKMLR++G VLME+++ ++        S   + + L+  N L + 
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEEL-AEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSS

Query:  LDKILSIDEIMAMICSER-RKKPGKRPR
        +D  + I+EI+  IC+++ +KK  KR R
Subjt:  LDKILSIDEIMAMICSER-RKKPGKRPR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown2.1e-2246.09Show/hide
Query:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEEL-AEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSS
        MEE  +ILK+NR +D++W CSLSESELD+LIS+K +V++RAKV G E+L A+KF+LKMLR++G VLME+++ ++        S   + + L+  N L + 
Subjt:  MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEEL-AEKFNLKMLRAIGFVLMEHLKGQLR----AGVSDQSQSAALNGSNFLDSS

Query:  LDKILSIDEIMAMICSER-RKKPGKRPR
        +D  + I+EI+  IC+++ +KK  KR R
Subjt:  LDKILSIDEIMAMICSER-RKKPGKRPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAAAGAAATTTTGAAAGATAATAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCGGAACTTGACATGCTGATTAGCATTAAGATGATAGT
TCTCCAACGTGCAAAAGTTATTGGCCATGAAGAACTAGCTGAGAAATTTAATCTGAAGATGCTTCGTGCTATAGGGTTTGTATTGATGGAGCATCTTAAGGGACAACTGA
GGGCGGGTGTTTCAGATCAATCTCAATCTGCTGCCTTAAATGGGAGCAACTTTTTGGACAGCAGTCTTGATAAAATTTTGTCAATTGACGAGATAATGGCGATGATCTGT
TCTGAAAGAAGGAAGAAACCTGGAAAAAGGCCGCGGGAGAAGGTTGATTCAAGACCGAAGAACGAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGCGAAAGAAATTTTGAAAGATAATAGAATTGAAGATATCAGTTGGCTTTGTTCACTATCTGAATCGGAACTTGACATGCTGATTAGCATTAAGATGATAGT
TCTCCAACGTGCAAAAGTTATTGGCCATGAAGAACTAGCTGAGAAATTTAATCTGAAGATGCTTCGTGCTATAGGGTTTGTATTGATGGAGCATCTTAAGGGACAACTGA
GGGCGGGTGTTTCAGATCAATCTCAATCTGCTGCCTTAAATGGGAGCAACTTTTTGGACAGCAGTCTTGATAAAATTTTGTCAATTGACGAGATAATGGCGATGATCTGT
TCTGAAAGAAGGAAGAAACCTGGAAAAAGGCCGCGGGAGAAGGTTGATTCAAGACCGAAGAACGAGTTGTGA
Protein sequenceShow/hide protein sequence
MEEAKEILKDNRIEDISWLCSLSESELDMLISIKMIVLQRAKVIGHEELAEKFNLKMLRAIGFVLMEHLKGQLRAGVSDQSQSAALNGSNFLDSSLDKILSIDEIMAMIC
SERRKKPGKRPREKVDSRPKNEL