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Sed0002603 (gene) of Chayote v1 genome

Gene IDSed0002603
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L14-2-like
Genome locationLG12:2797804..2799223
RNA-Seq ExpressionSed0002603
SyntenySed0002603
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002784 - Ribosomal protein L14e domain
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR039660 - Ribosomal protein L14
IPR041985 - Ribosomal protein L14, KOW motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153191.1 60S ribosomal protein L14-2-like [Momordica charantia]1.3e-6196.24Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTD KIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        ALNDFDRFKLMLAKIK+AGLVRQEL+KLKKSES
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

XP_022924785.1 60S ribosomal protein L14-2-like [Cucurbita moschata]9.8e-6296.24Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        +LNDFDRFKLMLAKIKRAGLVRQEL+KL+KSES
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

XP_022924787.1 60S ribosomal protein L14-1-like [Cucurbita moschata]1.3e-6196.24Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        ALNDFDRFKLMLAKIKR GLVRQEL+KLKKSE+
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

XP_022947422.1 60S ribosomal protein L14-2-like [Cucurbita moschata]4.4e-6296.99Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        +LNDFDRFKLMLAKIKRAGLVRQEL+KLKKSES
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

XP_038881110.1 60S ribosomal protein L14-2-like [Benincasa hispida]9.8e-6296.24Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLV+KRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        +LNDFDRFKLMLAKIKRAGLVRQEL+KLKKSES
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

TrEMBL top hitse value%identityAlignment
A0A6J1EG14 60S ribosomal protein L14-2-like4.7e-6296.24Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        +LNDFDRFKLMLAKIKRAGLVRQEL+KL+KSES
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

A0A6J1G6E8 60S ribosomal protein L14-2-like2.1e-6296.99Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        +LNDFDRFKLMLAKIKRAGLVRQEL+KLKKSES
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

A0A6J1IGF2 60S ribosomal protein L14-2-like2.1e-6296.99Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        +LNDFDRFKLMLAKIKRAGLVRQEL+KLKKSES
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

A0A6J1IQJ0 60S ribosomal protein L14-1-like6.2e-6296.24Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        ALNDFDRFKLMLAKIKR GLVRQEL+KLKKSE+
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

A0A6J1IT01 60S ribosomal protein L14-2-like4.7e-6296.24Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKRYVEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES
        +LNDFDRFKLMLAKIKRAGLVRQEL+KL+KSES
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKSES

SwissProt top hitse value%identityAlignment
O46160 60S ribosomal protein L141.0e-2447.37Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKR
        M F+R+VEIGRV    YG D GKLV IVDV+DQNRALVD P   + R  MNFK L LT++K       +   + +A +  ++ KKWE+S   +K+  K++
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKR

Query:  RAALNDFDRFKLMLAKIKRAGLVRQELSKLKKS
        R  L DF+RFKLM AK  R  L++ E  KL+K+
Subjt:  RAALNDFDRFKLMLAKIKRAGLVRQELSKLKKS

P55844 Probable 60S ribosomal protein L141.5e-5279.39Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        MPFKR+VEIGRV L+NYG+DYG+LVVIVDV+DQ RALVDAPDM RS +NFKRLSLTD+KIDIKRVP+KK+LI+A++AADV+ KW  SSWGRKL+VKK RA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKS
        ALNDFDRFK+MLAKIKRA  VRQEL+KLKK+
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKKS

Q7XYA7 60S ribosomal protein L145.8e-2550Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPD--MVRSQMNFKRLSLTDIKI-DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKK
        M F R+VE GRV LV+YGE   KLVVIVD+LDQNR LVD+P   + R  +N KR++LT IK+ DI R     E+     AA V + +  S WG+KL  ++
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPD--MVRSQMNFKRLSLTDIKI-DIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKK

Query:  RRAALNDFDRFKLMLAKIKRAGLVRQELSKLK
        +RAAL+DF RFK+M+A++K++  +  EL+KLK
Subjt:  RRAALNDFDRFKLMLAKIKRAGLVRQELSKLK

Q9SIM4 60S ribosomal protein L14-13.0e-5383.08Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        M FKR+VEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKK
        ALNDFDRFK+MLAKIKRAG+VRQEL+KLK+
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKK

Q9T043 60S ribosomal protein L14-23.9e-5383.08Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        M FKRYVEIGRV LVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKK
         LNDFDRFK+MLAKIK+AG+VRQEL+KLKK
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKK

Arabidopsis top hitse value%identityAlignment
AT2G20450.1 Ribosomal protein L142.1e-5483.08Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        M FKR+VEIGRV LVNYGEDYGKLVVIVDV+DQNRALVDAPDM R QMN KRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKK
        ALNDFDRFK+MLAKIKRAG+VRQEL+KLK+
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKK

AT4G27090.1 Ribosomal protein L142.8e-5483.08Show/hide
Query:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA
        M FKRYVEIGRV LVNYGED+GKLVVIVDV+DQNRALVDAPDM R QMNFKRLSLTDI IDI RVP+KK LIEAM+ ADV+ KWE SSWGRKL+V+KRRA
Subjt:  MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRA

Query:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKK
         LNDFDRFK+MLAKIK+AG+VRQEL+KLKK
Subjt:  ALNDFDRFKLMLAKIKRAGLVRQELSKLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTCAAGAGGTACGTTGAGATCGGGAGAGTCGGTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTTGTCATTGTCGACGTTCTTGATCAGAACAGAGCTTT
GGTGGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATCAAAATTGACATTAAGAGGGTCCCTAGAAAGAAGGAACTCATTGAAG
CCATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGAGAAAACTACTCGTGAAGAAAAGAAGGGCGGCACTTAATGATTTTGATAGGTTCAAACTA
ATGTTGGCTAAGATAAAGAGAGCTGGATTGGTTAGGCAAGAGCTCTCAAAGCTGAAAAAGAGTGAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGTTCAAGAGGTACGTTGAGATCGGGAGAGTCGGTCTCGTCAACTATGGCGAAGACTACGGAAAGCTTGTTGTCATTGTCGACGTTCTTGATCAGAACAGAGCTTT
GGTGGATGCTCCTGATATGGTCAGATCTCAAATGAACTTCAAGAGACTTTCTCTTACTGACATCAAAATTGACATTAAGAGGGTCCCTAGAAAGAAGGAACTCATTGAAG
CCATGAAGGCTGCTGATGTTCAGAAAAAGTGGGAGGATAGCTCTTGGGGGAGAAAACTACTCGTGAAGAAAAGAAGGGCGGCACTTAATGATTTTGATAGGTTCAAACTA
ATGTTGGCTAAGATAAAGAGAGCTGGATTGGTTAGGCAAGAGCTCTCAAAGCTGAAAAAGAGTGAATCTTAG
Protein sequenceShow/hide protein sequence
MPFKRYVEIGRVGLVNYGEDYGKLVVIVDVLDQNRALVDAPDMVRSQMNFKRLSLTDIKIDIKRVPRKKELIEAMKAADVQKKWEDSSWGRKLLVKKRRAALNDFDRFKL
MLAKIKRAGLVRQELSKLKKSES