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Sed0002611 (gene) of Chayote v1 genome

Gene IDSed0002611
OrganismSechium edule (Chayote v1)
DescriptionZnMc domain-containing protein
Genome locationLG03:987744..989212
RNA-Seq ExpressionSed0002611
SyntenySed0002611
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001818 - Peptidase M10, metallopeptidase
IPR006026 - Peptidase, metallopeptidase
IPR021190 - Peptidase M10A
IPR024079 - Metallopeptidase, catalytic domain superfamily
IPR033739 - Peptidase M10A, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602460.1 Metalloendoproteinase 2-MMP, partial [Cucurbita argyrosperma subsp. sororia]9.0e-3971.43Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA
        V +++P+D+TI+F R SHGDG PFDGPGG LAHAFAP DGRLHFDAD+ Y I A    FDLESV +HE+GH+LGLGHSNV QAIMYP ISSGTVK  L A
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA

Query:  DDVNGMKALYNF
        DD+NG+KALY F
Subjt:  DDVNGMKALYNF

XP_017224741.1 PREDICTED: metalloendoproteinase 1-like [Daucus carota subsp. sativus]1.4e-3670.64Show/hide
Query:  NNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDADD
        N   SDLTI+F RG HGDG+PFDGPGGILAHAF P DGRLHFDADE++SI A+  + DLESV +HEIGHLLGL HS V  AIMYP I  G VKTNL  DD
Subjt:  NNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDADD

Query:  VNGMKALYN
        + G+KALYN
Subjt:  VNGMKALYN

XP_022134258.1 metalloendoproteinase 3-MMP-like [Momordica charantia]4.9e-3761.67Show/hide
Query:  NSKAQRMMKMVSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFIS
        +SK +     V+NN  +D+TISFQRG+HGDG PFDGPGG+LAHAFAP DGRLH D D++Y++ A+ G+FD  SV +HEIGH++GLGHSN  QAIMYP+I+
Subjt:  NSKAQRMMKMVSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFIS

Query:  SGTVKTNLDADDVNGMKALY
         G VK  L  DD+NG++ALY
Subjt:  SGTVKTNLDADDVNGMKALY

XP_022959874.1 metalloendoproteinase 1-like [Cucurbita moschata]9.0e-3971.43Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA
        V +++P+D+TI+F R SHGDG PFDGPGG LAHAFAP DGRLHFDAD+ Y I A    FDLESV +HE+GH+LGLGHSNV QAIMYP ISSGTVK  L A
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA

Query:  DDVNGMKALYNF
        DD+NG+KALY F
Subjt:  DDVNGMKALYNF

XP_023544550.1 metalloendoproteinase 1-like [Cucurbita pepo subsp. pepo]2.2e-3769.64Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA
        V ++ P+D+TI+F R +HGDG PFDG GG LAHAFAP DGRLHFDAD+ Y I A    FDLESV +HE+GH+LGLGHSNV QAIMYP ISSGTVK  L A
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA

Query:  DDVNGMKALYNF
        DD+NG+KALY F
Subjt:  DDVNGMKALYNF

TrEMBL top hitse value%identityAlignment
A0A175YGL0 ZnMc domain-containing protein5.9e-3670.48Show/hide
Query:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDADDVNGM
        SDLT+++ RG HGDG+ FDGPGG+LAHAF P DGRLHFD DE++SI A+  + DLESV +HEIGHLLGLGHS V  AIMYP IS G VKTN  ADDV G+
Subjt:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDADDVNGM

Query:  KALYN
        KALYN
Subjt:  KALYN

A0A175YHG4 ZnMc domain-containing protein7.0e-3770.64Show/hide
Query:  NNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDADD
        N   SDLTI+F RG HGDG+PFDGPGGILAHAF P DGRLHFDADE++SI A+  + DLESV +HEIGHLLGL HS V  AIMYP I  G VKTNL  DD
Subjt:  NNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDADD

Query:  VNGMKALYN
        + G+KALYN
Subjt:  VNGMKALYN

A0A6J1C1I2 metalloendoproteinase 3-MMP-like2.4e-3761.67Show/hide
Query:  NSKAQRMMKMVSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFIS
        +SK +     V+NN  +D+TISFQRG+HGDG PFDGPGG+LAHAFAP DGRLH D D++Y++ A+ G+FD  SV +HEIGH++GLGHSN  QAIMYP+I+
Subjt:  NSKAQRMMKMVSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFIS

Query:  SGTVKTNLDADDVNGMKALY
         G VK  L  DD+NG++ALY
Subjt:  SGTVKTNLDADDVNGMKALY

A0A6J1H9C5 metalloendoproteinase 1-like4.4e-3971.43Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA
        V +++P+D+TI+F R SHGDG PFDGPGG LAHAFAP DGRLHFDAD+ Y I A    FDLESV +HE+GH+LGLGHSNV QAIMYP ISSGTVK  L A
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA

Query:  DDVNGMKALYNF
        DD+NG+KALY F
Subjt:  DDVNGMKALYNF

A0A6J1JKI7 metalloendoproteinase 2-MMP-like9.1e-3768.75Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA
        V +++P+D+TI+F R +HGDG  FDG GG LAHAFAP DGRLHFDAD+ Y I A  G FDLESV +HE+GH+LGLGHS V QAIMYP ISSGTVK +L A
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA

Query:  DDVNGMKALYNF
        DD+NG+KALY F
Subjt:  DDVNGMKALYNF

SwissProt top hitse value%identityAlignment
O04529 Metalloendoproteinase 2-MMP9.7e-2853.98Show/hide
Query:  SPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKY-------SIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTN
        S SD+TI F  G HGDG PFDG  G LAHAF+P  G+ H DADE +       S ++++   DLESV +HEIGHLLGLGHS+V ++IMYP I++G  K +
Subjt:  SPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKY-------SIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTN

Query:  LDADDVNGMKALY
        L  DDV G++ LY
Subjt:  LDADDVNGMKALY

O23507 Metalloendoproteinase 1-MMP5.0e-2453.04Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSI-VALSGH----FDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVK
        V + + +DL I F  G HGDG PFDG  G LAHAFAP++GRLH DA E + +   L G      DLESV  HEIGHLLGLGHS+   A+MYP +   T K
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSI-VALSGH----FDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVK

Query:  TNLDADDVNGMKALY
         +L  DDV G+  LY
Subjt:  TNLDADDVNGMKALY

P29136 Metalloendoproteinase 16.3e-2755.45Show/hide
Query:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKY------SIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA
        +++ I F   +HGD  PFDGPGGIL HAFAP DGR HFDADE +      +   ++  FDLESV +HEIGHLLGLGHS+  +AIMYP I   T K NL  
Subjt:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKY------SIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNLDA

Query:  DDVNGMKALY
        DD++G++ LY
Subjt:  DDVNGMKALY

Q5XF51 Metalloendoproteinase 3-MMP9.1e-2650Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSI--------VALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSG
        V   S SD++I F  G HGDG PFDGP   LAHAF+P  G  H D +E + +        +++S   DLESV +HEIGHLLGLGHS+V  +IMYP I +G
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSI--------VALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSG

Query:  TVKTNLDADDVNGMKALY
          K +L  DDV G++ LY
Subjt:  TVKTNLDADDVNGMKALY

Q8GWW6 Metalloendoproteinase 4-MMP1.7e-2451.79Show/hide
Query:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDA--------DEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNL
        +D+ I F  G HGDG PFDG  G+LAH F+P++GRLH D         DE+ S VA+    DLESV +HEIGH+LGLGHS+V  A MYP +   + K NL
Subjt:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDA--------DEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNL

Query:  DADDVNGMKALY
        + DDV G+++LY
Subjt:  DADDVNGMKALY

Arabidopsis top hitse value%identityAlignment
AT1G24140.1 Matrixin family protein6.4e-2750Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSI--------VALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSG
        V   S SD++I F  G HGDG PFDGP   LAHAF+P  G  H D +E + +        +++S   DLESV +HEIGHLLGLGHS+V  +IMYP I +G
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSI--------VALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSG

Query:  TVKTNLDADDVNGMKALY
          K +L  DDV G++ LY
Subjt:  TVKTNLDADDVNGMKALY

AT1G59970.1 Matrixin family protein7.9e-2550.44Show/hide
Query:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKY---------SIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTN
        +D+ I F  G HGDG PFDG  G LAHA +P  G LH D DE +          I+ ++   DLESV +HEIGHLLGLGHS+V  AIM+P IS G  K  
Subjt:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKY---------SIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTN

Query:  LDADDVNGMKALY
        L  DD+ G++ LY
Subjt:  LDADDVNGMKALY

AT1G70170.1 matrix metalloproteinase6.9e-2953.98Show/hide
Query:  SPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKY-------SIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTN
        S SD+TI F  G HGDG PFDG  G LAHAF+P  G+ H DADE +       S ++++   DLESV +HEIGHLLGLGHS+V ++IMYP I++G  K +
Subjt:  SPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKY-------SIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTN

Query:  LDADDVNGMKALY
        L  DDV G++ LY
Subjt:  LDADDVNGMKALY

AT2G45040.1 Matrixin family protein1.2e-2551.79Show/hide
Query:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDA--------DEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNL
        +D+ I F  G HGDG PFDG  G+LAH F+P++GRLH D         DE+ S VA+    DLESV +HEIGH+LGLGHS+V  A MYP +   + K NL
Subjt:  SDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDA--------DEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVKTNL

Query:  DADDVNGMKALY
        + DDV G+++LY
Subjt:  DADDVNGMKALY

AT4G16640.1 Matrixin family protein3.5e-2553.04Show/hide
Query:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSI-VALSGH----FDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVK
        V + + +DL I F  G HGDG PFDG  G LAHAFAP++GRLH DA E + +   L G      DLESV  HEIGHLLGLGHS+   A+MYP +   T K
Subjt:  VSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSI-VALSGH----FDLESVGIHEIGHLLGLGHSNVTQAIMYPFISSGTVK

Query:  TNLDADDVNGMKALY
         +L  DDV G+  LY
Subjt:  TNLDADDVNGMKALY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAACGTCCATGCATACAAATCGACATGTCGAACTCGAAAGCTCAACGAATGATGAAGATGGTCTCCAACAATTCCCCTTCGGACCTCACAATAAGCTTTCAAAG
AGGGTCCCATGGGGATGGGGCTCCGTTTGATGGGCCAGGGGGAATCCTAGCCCATGCCTTTGCACCGCAGGACGGCCGGCTTCACTTCGACGCCGATGAAAAGTATTCGA
TCGTCGCCCTTTCGGGTCATTTTGACCTCGAAAGTGTGGGGATTCATGAGATTGGACACCTTCTCGGGCTTGGTCACAGCAATGTTACTCAGGCTATTATGTACCCCTTC
ATTAGTTCTGGAACTGTCAAGACCAACCTTGATGCTGATGATGTTAACGGAATGAAGGCTTTGTATAATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAACGTCCATGCATACAAATCGACATGTCGAACTCGAAAGCTCAACGAATGATGAAGATGGTCTCCAACAATTCCCCTTCGGACCTCACAATAAGCTTTCAAAG
AGGGTCCCATGGGGATGGGGCTCCGTTTGATGGGCCAGGGGGAATCCTAGCCCATGCCTTTGCACCGCAGGACGGCCGGCTTCACTTCGACGCCGATGAAAAGTATTCGA
TCGTCGCCCTTTCGGGTCATTTTGACCTCGAAAGTGTGGGGATTCATGAGATTGGACACCTTCTCGGGCTTGGTCACAGCAATGTTACTCAGGCTATTATGTACCCCTTC
ATTAGTTCTGGAACTGTCAAGACCAACCTTGATGCTGATGATGTTAACGGAATGAAGGCTTTGTATAATTTCTGA
Protein sequenceShow/hide protein sequence
MEQRPCIQIDMSNSKAQRMMKMVSNNSPSDLTISFQRGSHGDGAPFDGPGGILAHAFAPQDGRLHFDADEKYSIVALSGHFDLESVGIHEIGHLLGLGHSNVTQAIMYPF
ISSGTVKTNLDADDVNGMKALYNF