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Sed0002633 (gene) of Chayote v1 genome

Gene IDSed0002633
OrganismSechium edule (Chayote v1)
DescriptionCopper transport protein like
Genome locationLG07:37742021..37744401
RNA-Seq ExpressionSed0002633
SyntenySed0002633
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573880.1 Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3192.94Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP-AAPAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWEDEAP AAPAP AA AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP-AAPAPEAAPAAA

XP_022945074.1 copper transport protein ATX1-like [Cucurbita moschata]1.2e-3192.94Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPA-APAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWEDEAPA APAP AA AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPA-APAPEAAPAAA

XP_022968570.1 copper transport protein ATX1-like isoform X2 [Cucurbita maxima]1.5e-3191.76Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP-AAPAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWEDEAP AAPAP AAPAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP-AAPAPEAAPAAA

XP_023541206.1 copper transport protein ATX1-like [Cucurbita pepo subsp. pepo]1.5e-3192.94Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP-AAPAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWEDEAP AAPAP AA AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP-AAPAPEAAPAAA

XP_038893429.1 copper transport protein ATX1-like [Benincasa hispida]1.2e-3191.67Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE FDIDIDAQKVTVKGNV+REVVFQTVSKTGKKTAYWE++APAA A EA PAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAPAAA

TrEMBL top hitse value%identityAlignment
A0A5A7SZ31 Copper transport protein ATX1-like6.2e-3187.21Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAPAAASS
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWED+A AAPA   APA A +
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAPAAASS

A0A6J1FZY8 copper transport protein ATX1-like5.6e-3292.94Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPA-APAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWEDEAPA APAP AA AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPA-APAPEAAPAAA

A0A6J1HTV3 copper transport protein ATX1-like isoform X39.6e-3284.95Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP---------AAPAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWEDEAP         AAPAPEAAPAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP---------AAPAPEAAPAAA

A0A6J1HXJ6 copper transport protein ATX1-like isoform X27.4e-3291.76Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP-AAPAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWEDEAP AAPAP AAPAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP-AAPAPEAAPAAA

A0A6J1I011 copper transport protein ATX1-like isoform X12.1e-3186.67Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP------AAPAPEAAPAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV+R+VVFQTVSKTGKKTAYWEDEAP      AAPAP AAPAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAP------AAPAPEAAPAAA

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 451.2e-1050.82Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW
        L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V RE V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW

F4JZL7 Heavy metal-associated isoprenylated plant protein 331.4e-0847.69Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW
        QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV   V+ + + K+GK    W
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW

O82089 Copper transport protein CCH3.4e-2676.54Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAP
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV+ E VFQTVSKTGKKT+YW  EA A P  EA P
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAP

Q84J88 Heavy metal-associated isoprenylated plant protein 362.2e-0942.19Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV+ E++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW

Q94BT9 Copper transport protein ATX11.9e-2473.68Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPA
        MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNVQ + V QTV+KTGKKTA+WE E   A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPA

Arabidopsis top hitse value%identityAlignment
AT1G66240.1 homolog of anti-oxidant 11.3e-2573.68Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPA
        MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNVQ + V QTV+KTGKKTA+WE E   A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPA

AT1G66240.2 homolog of anti-oxidant 11.5e-2172.73Show/hide
Query:  MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPA
        M+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNVQ + V QTV+KTGKKTA+WE E   A A
Subjt:  MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPA

AT3G56240.1 copper chaperone2.4e-2776.54Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAP
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV+ E VFQTVSKTGKKT+YW  EA A P  EA P
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAP

AT3G56891.1 Heavy metal transport/detoxification superfamily protein8.4e-1250.82Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW
        L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V RE V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW

AT5G27690.1 Heavy metal transport/detoxification superfamily protein1.6e-1042.19Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV+ E++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAAAAGGGTCTTGGGTAAACTGGAAGGAGTCGAAACATTTGACATCGACAT
AGATGCACAAAAGGTGACCGTGAAAGGCAATGTGCAGCGCGAAGTAGTTTTCCAAACTGTTTCGAAAACCGGGAAGAAGACTGCATACTGGGAGGACGAAGCCCCGGCAG
CACCTGCACCAGAGGCAGCCCCAGCAGCCGCTAGCAGCTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAAGCCTGTGAAAACCCATAAACGCAGAGATCTGCGAGGGCGAAATTTCCAAGACTTTTTTTTCGTCGATTTATCCTCTCGAATTTCTGCAATCTGTAACCATGTCT
CAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAAAAGGGTCTTGGGTAAACTGGAAGGAGTCGAAACATTTGACATCGACATAGATGC
ACAAAAGGTGACCGTGAAAGGCAATGTGCAGCGCGAAGTAGTTTTCCAAACTGTTTCGAAAACCGGGAAGAAGACTGCATACTGGGAGGACGAAGCCCCGGCAGCACCTG
CACCAGAGGCAGCCCCAGCAGCCGCTAGCAGCTGAAGCAGAAGCTAAACCTGCGGCTGCTAAAAGTTATTCCTATTTATAATGGAAATTTTCTGTTCAATGCATAAGGTA
TTTGCTTCGTGAAGCTAATAATAATGTAATAGTACGTGAAACTTGGCTATTTAGTCTGTAATATTTTGATGTAAGTGCTTCTTGTATGACCTACATTAAAACTTAACTAT
ACTTTTTGTTTTTGTCTCATTTTTTTTTTCTTTCTGCTATTTAGTCTGTAATATGTTGTTTGAAATTGTTCAATTCCTTGAAGGGCCTTCAATGGCTGTATGGCTTAAAT
TTGAAATTGTTGGTTAAGTCTGATATTTG
Protein sequenceShow/hide protein sequence
MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVQREVVFQTVSKTGKKTAYWEDEAPAAPAPEAAPAAASS