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Sed0002642 (gene) of Chayote v1 genome

Gene IDSed0002642
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG01:17690879..17691952
RNA-Seq ExpressionSed0002642
SyntenySed0002642
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607449.1 hypothetical protein SDJN03_00791, partial [Cucurbita argyrosperma subsp. sororia]7.9e-3175.56Show/hide
Query:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        MA+TN L  LV+FL   NLLCSNAVPTSRSV L+HG DQFL VSS+ H+V+AT++E  HGRM VELNDYPGSGANNRHTPRPQFRGC DC
Subjt:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
XP_008442734.1 PREDICTED: uncharacterized protein LOC103486492 [Cucumis melo]3.3e-2974.16Show/hide
Query:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        A ++ L+ LVIFL  YNLLCSNAVPTSRSV L+HG   FL VSS+ H+V  TEEE  HGRMVV LNDYPGSGANNRHTPRPQFRGC DC
Subjt:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
XP_022137483.1 uncharacterized protein LOC111008913 [Momordica charantia]1.5e-2976.4Show/hide
Query:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        A T +L+ LVIFL F +LL SNAVPTSRSV L+HG DQFLQVSS  H+V+  EEEV HGRMVV LNDYPGSGANNRHTPRPQFRGC DC
Subjt:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
XP_022949159.1 uncharacterized protein LOC111452592 [Cucurbita moschata]3.6e-3176.67Show/hide
Query:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        MATTN L  LV+FL   NLLCSNAVPTSRSV L+HG DQFL VSS+ H+V+AT++E  HGRM VELNDYPGSGANNRHTPRPQFRGC DC
Subjt:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
XP_022998079.1 uncharacterized protein LOC111492835 [Cucurbita maxima]4.6e-3176.67Show/hide
Query:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        MATTN L  LV+FL   NLLCSNAVPTSRSV L+HG DQFL VSS+ H+V+AT++E  HGRM VELNDYPGSGANNRHTPRPQFRGC DC
Subjt:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
TrEMBL top hitse value%identityAlignment
A0A1S3B758 uncharacterized protein LOC1034864921.6e-2974.16Show/hide
Query:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        A ++ L+ LVIFL  YNLLCSNAVPTSRSV L+HG   FL VSS+ H+V  TEEE  HGRMVV LNDYPGSGANNRHTPRPQFRGC DC
Subjt:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
A0A5D3BKK4 Putative Disulfide bond formation protein B 21.6e-2974.16Show/hide
Query:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        A ++ L+ LVIFL  YNLLCSNAVPTSRSV L+HG   FL VSS+ H+V  TEEE  HGRMVV LNDYPGSGANNRHTPRPQFRGC DC
Subjt:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
A0A6J1CAG5 uncharacterized protein LOC1110089137.2e-3076.4Show/hide
Query:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        A T +L+ LVIFL F +LL SNAVPTSRSV L+HG DQFLQVSS  H+V+  EEEV HGRMVV LNDYPGSGANNRHTPRPQFRGC DC
Subjt:  ATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
A0A6J1GC04 uncharacterized protein LOC1114525921.7e-3176.67Show/hide
Query:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        MATTN L  LV+FL   NLLCSNAVPTSRSV L+HG DQFL VSS+ H+V+AT++E  HGRM VELNDYPGSGANNRHTPRPQFRGC DC
Subjt:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
A0A6J1KDD0 uncharacterized protein LOC1114928352.2e-3176.67Show/hide
Query:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
        MATTN L  LV+FL   NLLCSNAVPTSRSV L+HG DQFL VSS+ H+V+AT++E  HGRM VELNDYPGSGANNRHTPRPQFRGC DC
Subjt:  MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74458.1 unknown protein3.9e-0464.29Show/hide
Query:  VVELNDYPGSGANNRHTPRPQFRGCPDC
        V ++NDYPGSGANNRHTP      C DC
Subjt:  VVELNDYPGSGANNRHTPRPQFRGCPDC
AT3G47510.1 unknown protein3.2e-0670.59Show/hide
Query:  IHGRMVVELNDYPGSGANNRHTPRPQFRGC-PDC
        +  RMV+ELNDYPGSGANNRH PR   RGC  DC
Subjt:  IHGRMVVELNDYPGSGANNRHTPRPQFRGC-PDC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCACCAATATCCTTAAATTCCTTGTCATTTTTTTGTCATTTTATAACCTTCTCTGTTCCAATGCTGTCCCTACTTCAAGAAGTGTCAGACTCATGCATGGATT
TGATCAGTTTCTTCAAGTTTCAAGCAATGCCCACGTGGTGGCTGCAACAGAGGAAGAAGTGATCCATGGAAGAATGGTTGTGGAACTAAATGACTATCCAGGATCTGGAG
CCAACAATCGCCACACACCAAGGCCACAATTTAGAGGCTGTCCTGATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ACCTAAGTCCCCCATCAAACCTTTTTTCTTTGTTTTTTTGCCCTCTAAAGCCATCAGCTCTGAGATTTCATTCATAAATACTCCATTGTCTTCCTCTGCTTTGAAGCAGA
GAGCAGCACTTTCAGCAATGGCTACCACCAATATCCTTAAATTCCTTGTCATTTTTTTGTCATTTTATAACCTTCTCTGTTCCAATGCTGTCCCTACTTCAAGAAGTGTC
AGACTCATGCATGGATTTGATCAGTTTCTTCAAGTTTCAAGCAATGCCCACGTGGTGGCTGCAACAGAGGAAGAAGTGATCCATGGAAGAATGGTTGTGGAACTAAATGA
CTATCCAGGATCTGGAGCCAACAATCGCCACACACCAAGGCCACAATTTAGAGGCTGTCCTGATTGTTGATTAGTTTTTACATCACATAATTTGGATATTGGTTGAATTT
ATATTTATATGATATATTGGTCTGAAATATCTATCCATCTATCATATATTATATGGATATGAATATGGGGTACTTGTGGAAGGAGGGTTTGGGCTTCTTCATCACTCTAT
TAAGTTGTTGAAAAGCTGAGGAAAAAAGAGGG
Protein sequenceShow/hide protein sequence
MATTNILKFLVIFLSFYNLLCSNAVPTSRSVRLMHGFDQFLQVSSNAHVVAATEEEVIHGRMVVELNDYPGSGANNRHTPRPQFRGCPDC