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Sed0002664 (gene) of Chayote v1 genome

Gene IDSed0002664
OrganismSechium edule (Chayote v1)
Descriptionauxin-regulated gene involved in organ size
Genome locationLG07:39030429..39030762
RNA-Seq ExpressionSed0002664
SyntenySed0002664
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES68729.1 transmembrane protein, putative [Medicago truncatula]4.5e-1277.19Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE
        MVRCF+L S+L+L+A+A SMVVLPL+LPPLPPPP+ALLFFPVGIMAAL++LA SP+E
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE

KAF5742459.1 putative transmembrane protein [Tripterygium wilfordii]3.5e-1270.77Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV
        MVRCF++ S++VL AVA SMVVLPLILPPLPPPP+ LLFFPVGIM AL+ LA SP E   G+ VV
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV

KAF7824740.1 putative transmembrane protein [Senna tora]2.0e-1275.38Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV
        MVRCF L S+LVLVA+A SMV+LPL+LPPLPPPP+ LLFFPVGIMAAL+LLA SP+E  D +AVV
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV

KAG6601123.1 Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1282.46Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE
        MVRCFNLVSI VL AVAVSMVVL L+LPPLPPPPI LLFFPVG+MAALL+LA SP++
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE

KEH40933.1 transmembrane protein, putative [Medicago truncatula]4.5e-1277.19Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE
        MVRCF+L S+L+L+A+A SMVVLPL+LPPLPPPP+ALLFFPVGIMAAL++LA SP+E
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE

TrEMBL top hitse value%identityAlignment
A0A072VHP6 Transmembrane protein, putative2.2e-1277.19Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE
        MVRCF+L S+L+L+A+A SMVVLPL+LPPLPPPP+ALLFFPVGIMAAL++LA SP+E
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE

A0A0L9UI81 Uncharacterized protein3.8e-1272.31Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV
        MVRCF+L S+L+L A+A SMVVLPL+LPPLPPPP+ LLFFPVGIMAAL+LLA SP+   DG+ VV
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV

A0A2C9W2X4 Uncharacterized protein2.9e-1271.88Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAV
        MVRCF LVS+LVL  +A SMVVLPL+LPPLPPPP+ L+FFPVGIMAAL+ LA SP E  DG+ V
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAV

A0A7J7D881 Putative transmembrane protein1.7e-1270.77Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV
        MVRCF++ S++VL AVA SMVVLPLILPPLPPPP+ LLFFPVGIM AL+ LA SP E   G+ VV
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV

G7J0G8 Transmembrane protein, putative2.2e-1277.19Show/hide
Query:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE
        MVRCF+L S+L+L+A+A SMVVLPL+LPPLPPPP+ALLFFPVGIMAAL++LA SP+E
Subjt:  MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTE

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE3.0e-0651.92Show/hide
Query:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPT
        F+L S+++LV +  S+++LPL+LPPLPPPP  LL  P+GIM  L++LA  P+
Subjt:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPT

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE5.1e-0645.9Show/hide
Query:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV
        F+L S+ +LV +  S+++LPL+LPPLPPPP  LL  P+GIM  L++LA  P+   + +  V
Subjt:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.5e-0553.85Show/hide
Query:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPT
        F++ S+L+LV V  S+V+LPL+LPPLPPPP  L+  PV ++  LL LA  PT
Subjt:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPT

Q8RXL7 ARGOS-like protein2.3e-0655.77Show/hide
Query:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPT
        F+L S++VLV +  S+++LPLILPPLPPPP  LL  P+GIM  L++LA  P+
Subjt:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPT

Arabidopsis top hitse value%identityAlignment
AT2G44080.1 ARGOS-like1.6e-0755.77Show/hide
Query:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPT
        F+L S++VLV +  S+++LPLILPPLPPPP  LL  P+GIM  L++LA  P+
Subjt:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPT

AT3G59900.1 auxin-regulated gene involved in organ size3.6e-0745.9Show/hide
Query:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV
        F+L S+ +LV +  S+++LPL+LPPLPPPP  LL  P+GIM  L++LA  P+   + +  V
Subjt:  FNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGTTGCTTTAATTTAGTCTCCATTCTCGTTCTCGTCGCCGTCGCCGTCTCCATGGTGGTTCTGCCGTTGATTCTTCCGCCGCTGCCTCCGCCGCCGATCGCGCT
TCTGTTCTTTCCGGTTGGAATCATGGCGGCGCTGCTCCTCCTTGCTTTGTCGCCGACTGAATTCCGAGACGGAGATGCCGTCGTTTGA
mRNA sequenceShow/hide mRNA sequence
CTCCGCCGCCGCCGCCGTCGCCGCCGCCTGAAATTTCAAAATTCACAACCACCGCCGCGGCCTCCGCCGGAATCTTTTCACGCACATTGCTCTCGCTCAAGGACATGGTC
CTATCTCCGACCATCGGAAGATTGCTATGGTACGTTGCTTTAATTTAGTCTCCATTCTCGTTCTCGTCGCCGTCGCCGTCTCCATGGTGGTTCTGCCGTTGATTCTTCCG
CCGCTGCCTCCGCCGCCGATCGCGCTTCTGTTCTTTCCGGTTGGAATCATGGCGGCGCTGCTCCTCCTTGCTTTGTCGCCGACTGAATTCCGAGACGGAGATGCCGTCGT
TTGA
Protein sequenceShow/hide protein sequence
MVRCFNLVSILVLVAVAVSMVVLPLILPPLPPPPIALLFFPVGIMAALLLLALSPTEFRDGDAVV