; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002674 (gene) of Chayote v1 genome

Gene IDSed0002674
OrganismSechium edule (Chayote v1)
DescriptionPre-mRNA-splicing factor SYF2
Genome locationLG05:43725383..43728457
RNA-Seq ExpressionSed0002674
SyntenySed0002674
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0000974 - Prp19 complex (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domainsIPR013260 - mRNA splicing factor SYF2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010847.1 Pre-mRNA-splicing factor syf2 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-16292.7Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHEC+E+CFKVIAE KARNQQNEPVP SSE V+AGR SGSSNFVPPDEYED +DE+ ++EGHSDGDTDKFSGGENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_011649295.1 pre-mRNA-splicing factor syf2 [Cucumis sativus]4.9e-16091.43Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHECSE+CFKVIAE KAR+Q+NEPVP SSE V+AGR SGSS+FVPPDEYED  DE+ D+EGHSDGD DKFSG ENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+KYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022943827.1 pre-mRNA-splicing factor syf2-like [Cucurbita moschata]2.3e-16292.7Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHEC+E+CFKVIAE KARNQQNEPVP SSE V+AGR SGSSNFVPPDEYED +DE+ ++EGHSDGDTDKFSGGENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_022986094.1 pre-mRNA-splicing factor syf2-like [Cucurbita maxima]3.0e-16292.7Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHEC+E+CFKVIAE KARNQQNEPVP SSE V+AGR SGSSNFVPPDEYED +DE+ ++EGHSDGDTDKFSGGENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

XP_023513083.1 pre-mRNA-splicing factor syf2-like [Cucurbita pepo subsp. pepo]6.8e-16292.38Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHEC+E+CFKVIAE KA+NQQNEPVP SSE V+AGR SGSSNFVPPDEYED +DE+ ++EGHSDGDTDKFSGGENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

TrEMBL top hitse value%identityAlignment
A0A0A0LJ81 Pre-mRNA-splicing factor SYF22.4e-16091.43Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHECSE+CFKVIAE KAR+Q+NEPVP SSE V+AGR SGSS+FVPPDEYED  DE+ D+EGHSDGD DKFSG ENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAE+KYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A5A7TRR3 Pre-mRNA-splicing factor SYF23.8e-15890.16Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHECSE+CFKVIA+ KAR+Q+NEPVP SSE V+AGR SGSS+FVPPDEYED  DE+ D+EGHSDGD DKFSG E VEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDMTK+YMLDTQEAAE+KYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LY+AYKKRTKNVN+DLEEYNKMK SDPEFYREASSLQYGKAPKISEDKI+NMVKEL DRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1FXE9 Pre-mRNA-splicing factor SYF21.1e-16292.7Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHEC+E+CFKVIAE KARNQQNEPVP SSE V+AGR SGSSNFVPPDEYED +DE+ ++EGHSDGDTDKFSGGENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1G6N2 Pre-mRNA-splicing factor SYF21.5e-15991.11Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHECSE+CF++IAE KARNQQNEPV  SSE V+AGR S  SNF PPDEYED  DE+ ++EGHSDGDTDK SGGENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLE+RKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

A0A6J1JD37 Pre-mRNA-splicing factor SYF21.5e-16292.7Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL
        MSDEGRVHPDCRNASNPYHEC+E+CFKVIAE KARNQQNEPVP SSE V+AGR SGSSNFVPPDEYED +DE+ ++EGHSDGDTDKFSGGENVEGDFT+L
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQL

Query:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT
        TGRKKKLFE+RLKMNEARKANQTAIAAEKKKMEP SESRG+SKQKWLEDRKKKIGKLLDANGLDM+KAYMLDTQEAAESKYKKWEK PAP+GWDVFNQKT
Subjt:  TGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKT

Query:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
        LYDAYKKRTKNVNVDLEEYNKMK SDPEFYREASSLQYGKAPKISEDKIDNMVKEL DR+EKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT
Subjt:  LYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYT

Query:  LEIKNNLERGTALPD
        LEIKNNLERGTALPD
Subjt:  LEIKNNLERGTALPD

SwissProt top hitse value%identityAlignment
Q28G05 Pre-mRNA-splicing factor syf22.4e-2439.25Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPQS--ESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKKPAPHGWDVFNQK
        R +K  EL LK NEARK N   +  E K+ +  S  E+R    +  L++ +KK  +   ANG+D  +A +L+ + E AE   +K ++K    G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPQS--ESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKKPAPHGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY
         L   Y++ TK +  D+EEY   K    E +   S   Y      S+  ID MV +L  + EKR+ +SRRR +++D DID IN+RN  FNKK ER +G+Y
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY

Query:  TLEIKNNLERGTAL
        T EIK NLERGTA+
Subjt:  TLEIKNNLERGTAL

Q4QRB2 Pre-mRNA-splicing factor SYF24.4e-2338.14Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKME-PQSESRGVSKQKW-LEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPH-GWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P +     ++ +W L++ +KK  K   A G D  K  +L+       ++++ +KK  P  G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKME-PQSESRGVSKQKW-LEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPH-GWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKASDPE-FYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +    E F+  ++SL +G     SE+ ID MV +L  + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKASDPE-FYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q6DV01 Pre-mRNA-splicing factor syf24.4e-2337.67Show/hide
Query:  KKLFELRLKMNEARKANQTAIAAEKKKME-PQSESRGVSKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKKPAPHGWDVFNQK
        +K  EL LK NEARK N   +  E K+++ P +     S+ +W   +E++KK+      A G D  +  +L+ + E AE   +K +K+    G+  +   
Subjt:  KKLFELRLKMNEARKANQTAIAAEKKKME-PQSESRGVSKQKW---LEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKKPAPHGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMK-ASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         +   Y++ T+ +  DLE+Y K++  S  EFY  ++SL +G      E  +D MV++L  + +KR+ +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMK-ASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Q8AVQ6 Pre-mRNA-splicing factor syf21.8e-2439.25Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPQS--ESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKKPAPHGWDVFNQK
        R +K  EL LK NEARK N   +  E K+ +  S  E+R    +  L++ +KK  +   ANG+D  +A +L+ + E AE   +K ++K    G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKMEPQS--ESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLD-TQEAAESKYKKWEKKPAPHGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY
         L   Y++ TK +  D+EEY   K    E +   S   Y      S+  ID MV +L  + EKR+ +SRRR +++D DID IN+RN  FNKK ER +G+Y
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY

Query:  TLEIKNNLERGTAL
        T EIK NLERGTA+
Subjt:  TLEIKNNLERGTAL

Q9D198 Pre-mRNA-splicing factor SYF24.4e-2338.14Show/hide
Query:  RKKKLFELRLKMNEARKANQTAIAAEKKKME-PQSESRGVSKQKW-LEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPH-GWDVFNQK
        R +K  EL LK NEARK N   +  E K+++ P +     ++ +W L++ +KK  K   A G D  K  +L+       ++++ +KK  P  G+  +   
Subjt:  RKKKLFELRLKMNEARKANQTAIAAEKKKME-PQSESRGVSKQKW-LEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPH-GWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKASDPE-FYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR
         L   Y + TK +  D+E Y + +    E F+  ++SL +G     SE+ ID MV +L  + EKR  +SRRR +++D DID IN+RN  FNKK ER +G+
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKASDPE-FYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGR

Query:  YTLEIKNNLERGTAL
        YT EIK NLERGTA+
Subjt:  YTLEIKNNLERGTAL

Arabidopsis top hitse value%identityAlignment
AT2G16860.1 GCIP-interacting family protein2.1e-11669.62Show/hide
Query:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKAR-NQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQ
        M  E RVHPDC NASNPYHEC E+CFK IAEAKAR  +QN  +    E  R                E   D+R++++  S  + ++    +  + D TQ
Subjt:  MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKAR-NQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQ

Query:  LTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQK
        LTGR+KKLFELRLKMNEARK+NQT + +EKKKME  +E++G+SKQKWLE RKKKIGKLLDANGLDMT+AYMLDTQEAAESKYKKWEK+P P GWDVFNQK
Subjt:  LTGRKKKLFELRLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQK

Query:  TLYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY
        TLY+AYKKRTKN+ VDLEEYN+M+A+DPEFYREASSLQYGKAPK S+DKID M KEL DR++KR+ FSRRRKF E+KDIDSINDRNEHFNKKIERAFG+Y
Subjt:  TLYDAYKKRTKNVNVDLEEYNKMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRY

Query:  TLEIKNNLERGTALPD
        TLEIKNNLERGTALPD
Subjt:  TLEIKNNLERGTALPD

AT4G35110.1 Arabidopsis phospholipase-like protein (PEARLI 4) family8.1e-0435.59Show/hide
Query:  RVHPDCRNASNPYHECSEFCFKVIAEAKA-RNQQNEPVPISSEVVRAGRGSGSSNFVPP
        + HPDC  A NP+HEC+  C + IA+    +N + +   + S     GR    SN  PP
Subjt:  RVHPDCRNASNPYHECSEFCFKVIAEAKA-RNQQNEPVPISSEVVRAGRGSGSSNFVPP

AT4G35110.2 Arabidopsis phospholipase-like protein (PEARLI 4) family8.1e-0435.59Show/hide
Query:  RVHPDCRNASNPYHECSEFCFKVIAEAKA-RNQQNEPVPISSEVVRAGRGSGSSNFVPP
        + HPDC  A NP+HEC+  C + IA+    +N + +   + S     GR    SN  PP
Subjt:  RVHPDCRNASNPYHECSEFCFKVIAEAKA-RNQQNEPVPISSEVVRAGRGSGSSNFVPP

AT4G35110.3 Arabidopsis phospholipase-like protein (PEARLI 4) family8.1e-0435.59Show/hide
Query:  RVHPDCRNASNPYHECSEFCFKVIAEAKA-RNQQNEPVPISSEVVRAGRGSGSSNFVPP
        + HPDC  A NP+HEC+  C + IA+    +N + +   + S     GR    SN  PP
Subjt:  RVHPDCRNASNPYHECSEFCFKVIAEAKA-RNQQNEPVPISSEVVRAGRGSGSSNFVPP

AT4G35110.4 Arabidopsis phospholipase-like protein (PEARLI 4) family8.1e-0435.59Show/hide
Query:  RVHPDCRNASNPYHECSEFCFKVIAEAKA-RNQQNEPVPISSEVVRAGRGSGSSNFVPP
        + HPDC  A NP+HEC+  C + IA+    +N + +   + S     GR    SN  PP
Subjt:  RVHPDCRNASNPYHECSEFCFKVIAEAKA-RNQQNEPVPISSEVVRAGRGSGSSNFVPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTACCATGAATGTAGCGAGTTCTGCTTTAAAGTTATAGCTGAAGCTAAGGCCCGGAATCA
GCAAAACGAGCCAGTTCCCATTTCATCAGAAGTTGTTCGAGCTGGTCGAGGTAGTGGTTCTTCGAATTTTGTGCCTCCTGATGAGTATGAAGATTTTCAAGATGAGAGGC
TTGATAAAGAGGGACATAGTGACGGTGATACTGACAAATTTAGTGGTGGGGAGAATGTGGAAGGAGACTTCACCCAACTCACGGGGAGGAAAAAGAAGTTGTTTGAACTT
AGGCTTAAGATGAATGAGGCACGGAAAGCTAATCAGACAGCAATAGCTGCTGAGAAAAAGAAAATGGAACCTCAATCAGAATCAAGAGGCGTTTCTAAACAAAAGTGGCT
TGAGGATCGAAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCAGAGTCCAAATATAAGAAAT
GGGAGAAGAAACCAGCTCCCCATGGATGGGATGTATTTAACCAGAAAACATTATACGATGCATACAAAAAACGGACGAAGAATGTAAATGTTGACCTTGAGGAATATAAT
AAAATGAAAGCATCTGATCCCGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACAATATGGTGAAAGAACTCAA
TGACCGGGACGAGAAGCGCAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATTGATTCCATCAATGATCGCAATGAGCATTTCAACAAAAAGATTGAAC
GGGCCTTTGGCAGATACACTCTGGAGATTAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATTTGGTTATATAAAAGAAAAAAGAAAAAAGAAAAAAGAAAAAAGCAAATATCCATAAGAATAATGGAAGGTGATTTTGCAACTTTCCCTTAGAATTATTTTGGGAGAAA
TCTGAGATTTCTCCATCGTTGTTCCCCAAATCGCGAAGGGAACCTCTTCCCCTTTCATCGTCGAGTTCTTCCCTGTCGGAAAACCCTAGTTTTCAGTGTGTTACTGAAGT
CCGAGAAGCTATTGCAGAGATGTCTGATGAAGGAAGAGTACACCCTGATTGTAGAAATGCTTCTAATCCTTACCATGAATGTAGCGAGTTCTGCTTTAAAGTTATAGCTG
AAGCTAAGGCCCGGAATCAGCAAAACGAGCCAGTTCCCATTTCATCAGAAGTTGTTCGAGCTGGTCGAGGTAGTGGTTCTTCGAATTTTGTGCCTCCTGATGAGTATGAA
GATTTTCAAGATGAGAGGCTTGATAAAGAGGGACATAGTGACGGTGATACTGACAAATTTAGTGGTGGGGAGAATGTGGAAGGAGACTTCACCCAACTCACGGGGAGGAA
AAAGAAGTTGTTTGAACTTAGGCTTAAGATGAATGAGGCACGGAAAGCTAATCAGACAGCAATAGCTGCTGAGAAAAAGAAAATGGAACCTCAATCAGAATCAAGAGGCG
TTTCTAAACAAAAGTGGCTTGAGGATCGAAAGAAGAAAATTGGGAAGCTTTTGGATGCAAATGGCTTGGATATGACAAAAGCATATATGTTAGATACACAAGAGGCAGCA
GAGTCCAAATATAAGAAATGGGAGAAGAAACCAGCTCCCCATGGATGGGATGTATTTAACCAGAAAACATTATACGATGCATACAAAAAACGGACGAAGAATGTAAATGT
TGACCTTGAGGAATATAATAAAATGAAAGCATCTGATCCCGAGTTCTACCGTGAGGCTTCAAGTCTTCAATATGGAAAGGCACCTAAGATTTCAGAGGATAAGATTGACA
ATATGGTGAAAGAACTCAATGACCGGGACGAGAAGCGCAAGTCGTTTAGCCGTAGGAGGAAGTTCCACGAAGACAAGGATATTGATTCCATCAATGATCGCAATGAGCAT
TTCAACAAAAAGATTGAACGGGCCTTTGGCAGATACACTCTGGAGATTAAAAACAATCTTGAGCGAGGAACTGCATTACCTGATTAAGTTTTTCACACTGTTAAAGAAGA
CATGCTTGTGAGAATAAAAAGGATTTTGGGAGAACTTGGAT
Protein sequenceShow/hide protein sequence
MSDEGRVHPDCRNASNPYHECSEFCFKVIAEAKARNQQNEPVPISSEVVRAGRGSGSSNFVPPDEYEDFQDERLDKEGHSDGDTDKFSGGENVEGDFTQLTGRKKKLFEL
RLKMNEARKANQTAIAAEKKKMEPQSESRGVSKQKWLEDRKKKIGKLLDANGLDMTKAYMLDTQEAAESKYKKWEKKPAPHGWDVFNQKTLYDAYKKRTKNVNVDLEEYN
KMKASDPEFYREASSLQYGKAPKISEDKIDNMVKELNDRDEKRKSFSRRRKFHEDKDIDSINDRNEHFNKKIERAFGRYTLEIKNNLERGTALPD