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Sed0002675 (gene) of Chayote v1 genome

Gene IDSed0002675
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:1580770..1581886
RNA-Seq ExpressionSed0002675
SyntenySed0002675
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600181.1 hypothetical protein SDJN03_05414, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1662.5Show/hide
Query:  MASIRVSVIWRILFFIIMLLMVSNVSATKFLDDNIPLEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY
        MAS  VSV WR +FFI MLLM SNVS+ K LD NIP+EDGF V++G SS F  LE E+E + + F+KSH  ND PRGGNY
Subjt:  MASIRVSVIWRILFFIIMLLMVSNVSATKFLDDNIPLEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY

KGN53134.1 hypothetical protein Csa_015383 [Cucumis sativus]3.4e-0951.19Show/hide
Query:  MASIRVSVIWRILFFIIMLLMVS----NVSATKFLDDNIPLEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY
        MAS RVS+I  ++FFIIMLL+ S    NVSA KFLD N PL+D F +++  SS F  ++ E++ + +D LK+   ND PRGGNY
Subjt:  MASIRVSVIWRILFFIIMLLMVS----NVSATKFLDDNIPLEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY

KGN53135.1 hypothetical protein Csa_014652 [Cucumis sativus]2.2e-0852.94Show/hide
Query:  MASIRVSVIWRILFFIIMLLMVS----NVSATKFLDDNIP-LEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY
        MAS RVS+I  +LFFIIML + S    N SA KFLD N P L+D F +++G SS F  LE E++ + +D LK+   ND PRGGNY
Subjt:  MASIRVSVIWRILFFIIMLLMVS----NVSATKFLDDNIP-LEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY

TrEMBL top hitse value%identityAlignment
A0A0A0KU24 Uncharacterized protein1.1e-0852.94Show/hide
Query:  MASIRVSVIWRILFFIIMLLMVS----NVSATKFLDDNIP-LEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY
        MAS RVS+I  +LFFIIML + S    N SA KFLD N P L+D F +++G SS F  LE E++ + +D LK+   ND PRGGNY
Subjt:  MASIRVSVIWRILFFIIMLLMVS----NVSATKFLDDNIP-LEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY

A0A0A0KW84 Uncharacterized protein1.6e-0951.19Show/hide
Query:  MASIRVSVIWRILFFIIMLLMVS----NVSATKFLDDNIPLEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY
        MAS RVS+I  ++FFIIMLL+ S    NVSA KFLD N PL+D F +++  SS F  ++ E++ + +D LK+   ND PRGGNY
Subjt:  MASIRVSVIWRILFFIIMLLMVS----NVSATKFLDDNIPLEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTAGAGTTTCAGTGATTTGGAGAATTTTGTTTTTCATAATTATGCTTTTAATGGTCTCTAATGTTTCTGCCACAAAATTCCTTGATGACAACATCCCTCT
TGAAGATGGATTCATTGTTAAAGTTGGTGAATCTTCATCATTTGATAACTTGGAGAGCGAGGTGGAAAATAAATCTGATGATTTCTTAAAATCGCACGCTAGCAATGACA
GACCTCGAGGTGGAAACTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATTAGAGTTTCAGTGATTTGGAGAATTTTGTTTTTCATAATTATGCTTTTAATGGTCTCTAATGTTTCTGCCACAAAATTCCTTGATGACAACATCCCTCT
TGAAGATGGATTCATTGTTAAAGTTGGTGAATCTTCATCATTTGATAACTTGGAGAGCGAGGTGGAAAATAAATCTGATGATTTCTTAAAATCGCACGCTAGCAATGACA
GACCTCGAGGTGGAAACTACTAA
Protein sequenceShow/hide protein sequence
MASIRVSVIWRILFFIIMLLMVSNVSATKFLDDNIPLEDGFIVKVGESSSFDNLESEVENKSDDFLKSHASNDRPRGGNY