CuGenDBv2

Gene ID	Sed0002684
Organism	Sechium edule (Chayote v1)
Description	Protein Ycf2-like
Genome location	LG01:29718368..29723561
RNA-Seq Expression	Sed0002684
Synteny	Sed0002684
Gene Ontology terms	GO:0110165 - cellular anatomical structure (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008440207.1 PREDICTED: uncharacterized protein LOC103484737 isoform X1 [Cucumis melo]

1.1e-20

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

XP_008440208.1 PREDICTED: uncharacterized protein LOC103484737 isoform X2 [Cucumis melo]

1.1e-20

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

XP_008440212.1 PREDICTED: uncharacterized protein LOC103484737 isoform X5 [Cucumis melo]

1.1e-20

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

XP_008440213.1 PREDICTED: uncharacterized protein LOC103484737 isoform X6 [Cucumis melo]

1.1e-20

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

XP_016899363.1 PREDICTED: uncharacterized protein LOC103484737 isoform X3 [Cucumis melo]

1.1e-20

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B065 uncharacterized protein LOC103484737 isoform X4

5.3e-21

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

A0A1S3B0K0 uncharacterized protein LOC103484737 isoform X6

5.3e-21

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

A0A1S3B0L9 uncharacterized protein LOC103484737 isoform X5

5.3e-21

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

A0A1S3B181 uncharacterized protein LOC103484737 isoform X7

5.3e-21

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

A0A1S4DTS6 uncharacterized protein LOC103484737 isoform X3

5.3e-21

36.26

Show/hide

Query:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG
        D+EQF  Y WGR ++E T+ ++K  I+   +S IG+GGFP+AL +WA+E IPL+A  SN FA R  F  P M NW +D  P WKDL EKVFQ        
Subjt:  DEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVFQHPGGKEDG

Query:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL
         +  D +     E   E+    P      S++ N    D EHNS   T      +++    G  ++  + AE  ++N +V +
Subjt:  GDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGN----DVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVEL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGACACTTACAAAGGATGATAACATACCAATCGCACAAAGAAAAAGGAAAGAAGGAAAAGATGGACTTCACTCCGAAGTTGAAAAAAAGAGAAAGGTTTCTACAAT
GAATTTAGATAAGACAGTAGGTAAAAGTGTGGACAGAACAATACGGACTACCAAGATCATGGAAAACGAAGGAACTGTACGTACTAAAGAGTTCACATCATCGAAAAAGA
GGGTTGGTGATATTTTGTACGACAAGAAGAAAATGAAAAGTGGTGATGAAAAGTCGAAGAAAATGAATGAGAAGGAAAGGGGAAAAAGAAAGGTGCATGATGATTTAAAT
AGCAAGCGAAAAAAACAGCATGTGGAAGAGTCGGATTGGGAAGATATACACAAACTGGATGAAGAGCAGTTCAAGAAATATAACTGGGGTAGGAGTGCATTTGAGACGAC
CCTGAAATATATCAAATCTACAATACAACACCCAACATCATCAACAATTGGTATCGGGGGATTCCCGTATGCACTACTTATCTGGGCATTCGAATGTATACCTCTAATAG
CACATGAGTCTAATCTATTCGCACGACGGAAGGGATTCAATAATCCAATCATGTTGAACTGGGAAAGCGATGAGCAGCCAAGGTGGAAGGATTTGCAGGAAAAAGTTTTC
CAACATCCGGGGGGTAAAGAAGATGGTGGAGATATAAGTGATTTCGAAAAATGGTTTGAGGATGAGGCATATAATGAAATAATAAAAGAACAACCAATATTCGAGGCTGG
TGGGAGTTCAAAGGGTAATGACGTGGAACACAATAGTGGAGTACCTACTATTGTTGAAGTGTTAGGAAGGAACAATGAGAAAGATGATGGAAATAACAACATACAGAACG
AGGATGCTGAAAAGAATGTTTACAATACTGTAGTGGAACTAACCCAGTACATGAAGACGTCATTGGATAGTTTAAACAAACGGTTAGATGAAATGTGGACGGTATTGAAA
GACATTTTTAATGATGTAAAGGAGCTGAAAGGATTGAATAATAATGTTGATGAAAGGGTGGATGATGAAGAGGGAAATGACAATGACGGTGATAATGGAGATAATTTGGA
TGGGAACAACAATAAAGGGAATGAAGTTGGAGAACAGAGTAATCCCGGTGTTTTGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MWTLTKDDNIPIAQRKRKEGKDGLHSEVEKKRKVSTMNLDKTVGKSVDRTIRTTKIMENEGTVRTKEFTSSKKRVGDILYDKKKMKSGDEKSKKMNEKERGKRKVHDDLN
SKRKKQHVEESDWEDIHKLDEEQFKKYNWGRSAFETTLKYIKSTIQHPTSSTIGIGGFPYALLIWAFECIPLIAHESNLFARRKGFNNPIMLNWESDEQPRWKDLQEKVF
QHPGGKEDGGDISDFEKWFEDEAYNEIIKEQPIFEAGGSSKGNDVEHNSGVPTIVEVLGRNNEKDDGNNNIQNEDAEKNVYNTVVELTQYMKTSLDSLNKRLDEMWTVLK
DIFNDVKELKGLNNNVDERVDDEEGNDNDGDNGDNLDGNNNKGNEVGEQSNPGVL

Sed0002684 (gene) of Chayote v1 genome