; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002689 (gene) of Chayote v1 genome

Gene IDSed0002689
OrganismSechium edule (Chayote v1)
DescriptionCCHC-type domain-containing protein
Genome locationLG05:9914312..9920013
RNA-Seq ExpressionSed0002689
SyntenySed0002689
Gene Ontology termsNA
InterPro domainsIPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930025.1 uncharacterized protein LOC111436463, partial [Cucurbita moschata]2.2e-8954.71Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW++QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +    + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLK+ LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

XP_022930059.1 uncharacterized protein LOC111436530, partial [Cucurbita moschata]3.7e-8954.97Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW+ QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +    + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLKE LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

XP_022946091.1 uncharacterized protein LOC111450286, partial [Cucurbita moschata]3.7e-8954.97Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW+ QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +    + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLKE LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]8.7e-9138.9Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW+ QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLV----------------N
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V                +
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLV----------------N

Query:  LTVVYDGYANRYSFTHNGRKTTLLPLFPKDVFLDQCKLEKKRQVVDAKEESENEKNEK-----------EMREKKSLREK--------------------
          V+YDGYANRYSFTHNGRKTTL+PL PKDVF+D CKLEKKRQ  DAK E E E +EK           + REKK  + K                    
Subjt:  LTVVYDGYANRYSFTHNGRKTTLLPLFPKDVFLDQCKLEKKRQVVDAKEESENEKNEK-----------EMREKKSLREK--------------------

Query:  ----------------------------QE----------------------------------------------------------------------
                                    QE                                                                      
Subjt:  ----------------------------QE----------------------------------------------------------------------

Query:  ----------------------------------NDMLDELHGCRFFKKID-------------------------------------------------
                                          +DMLDELHGC  F KID                                                 
Subjt:  ----------------------------------NDMLDELHGCRFFKKID-------------------------------------------------

Query:  --------------------------------------------------------------------------KVKAIRDWPTPTSVSEVRSFHGLAGF
                                                                                  KVKAI++WPTP +VSEVRSFHGLA F
Subjt:  --------------------------------------------------------------------------KVKAIRDWPTPTSVSEVRSFHGLAGF

Query:  YCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
        Y RFIK+FS+IA PLNELVKKNVSF+W  DQELAF TLKE LS APLL LPNF
Subjt:  YCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]1.9e-0567.35Show/hide
Query:  MERMIRGIEELTERIRRLEVQNQARERLPPPLADDHEDDYEGDNSDHLE
        M+R+IRGIEELT+RI RLE+QNQAR+R+P P      D YEGDNSDH E
Subjt:  MERMIRGIEELTERIRRLEVQNQARERLPPPLADDHEDDYEGDNSDHLE

XP_023553652.1 uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]1.3e-8955.24Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW+ QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +  K + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLKE LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

TrEMBL top hitse value%identityAlignment
A0A6J1EQJ1 uncharacterized protein LOC1114365301.8e-8954.97Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW+ QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +    + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLKE LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

A0A6J1EVV9 uncharacterized protein LOC1114364631.0e-8954.71Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW++QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +    + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLK+ LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

A0A6J1G2Q3 uncharacterized protein LOC1114502861.8e-8954.97Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW+ QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +    + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLKE LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

A0A6J1I622 LOW QUALITY PROTEIN: uncharacterized protein LOC1114699474.0e-8954.97Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW+ QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV R ALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +  K + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLKE LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

A0A6J1I8S0 uncharacterized protein LOC1114724896.1e-9055.24Show/hide
Query:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D
        K EK ESS  GKEK+++S  RN+DLKCW+ QGVG+YSRDCPN RIMTI+EGEIVT+DE +D+ + EE DE EEFSEEDPT +SLV RRALNT IK+   D
Subjt:  KKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNKRIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCH-D

Query:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA
        QRENLFQT              SGSCTNVVSSILV RLNL+T+PHPRPYKLQWLNDCGEV+V++Q LVSFTIGKY DD+LC V    V D        + 
Subjt:  QRENLFQT--------------SGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALVSFTIGKYADDILCLVNLTVVYD-------GYA

Query:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------
         R+    +  K + LP    +  K  F+    +  +     + KE  E ++   E+  K  +RE      +  +         R F  +           
Subjt:  NRYSFTHNGRKTTLLP----LFPKDVFLDQCKLEKKRQV-VDAKEESENEKNEKEMREKKSLREKQENDMLDEL------HGCRFFKKI-----------

Query:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF
          +KVKAI+DWPTP +VSEVRSFHGLA FY RFIK+FS+IA PLNELVKKNVSF+W  DQELAFNTLKE LSSAPLLALPNF
Subjt:  --DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNF

SwissProt top hitse value%identityAlignment
P03359 Gag-Pol polyprotein9.3e-1145.71Show/hide
Query:  PTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN
        P PT+  +VR F G AGF   +I  F+S+A PL  L K+++ F+W  + + AF+ +KE L SAP LALP+
Subjt:  PTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN

P04323 Retrovirus-related Pol polyprotein from transposon 17.61.6e-1037.04Show/hide
Query:  DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSF-VWGTDQELAFNTLKETLSSAPLLALPNF
        +K++AI+ +P PT   E+++F GL G+Y +FI +F+ IA P+ + +KKN+       + + AF  LK  +S  P+L +P+F
Subjt:  DKVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSF-VWGTDQELAFNTLKETLSSAPLLALPNF

P10272 Gag-Pol polyprotein2.1e-1041.03Show/hide
Query:  KVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN
        +++ +   P P +  EVR F G AGF   +I  F+ +A PL  L K++  F W T+ +LAF  LK+ L SAP L LP+
Subjt:  KVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN

P10273 Gag-Pol polyprotein2.7e-1043.18Show/hide
Query:  GCRFFKKIDKVKAIRDWPTPTSVSEVRSFHGLAGFYCR-FIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN
        G R+  K  K +AI   P P +  +VR F G AG YCR +I  F+ +A PL  L +    F WGT+Q+LAF  +K+ L S+P L LP+
Subjt:  GCRFFKKIDKVKAIRDWPTPTSVSEVRSFHGLAGFYCR-FIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN

P92523 Uncharacterized mitochondrial protein AtMg008601.3e-1244.87Show/hide
Query:  KVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN
        K++A+  WP P + +E+R F GL G+Y RF+K++  I  PL EL+KKN S  W     LAF  LK  +++ P+LALP+
Subjt:  KVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein9.2e-1444.87Show/hide
Query:  KVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN
        K++A+  WP P + +E+R F GL G+Y RF+K++  I  PL EL+KKN S  W     LAF  LK  +++ P+LALP+
Subjt:  KVKAIRDWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAATGATTCGAGGAATAGAGGAGTTGACAGAACGTATACGAAGGTTGGAGGTTCAAAACCAAGCTCGAGAGAGACTTCCACCACCTCTAGCGGATGACCACGA
AGATGATTATGAGGGAGATAACTCTGATCATCTAGAGGTTGACCAAGTCACAATGCTTGCAGGACAACGAAAGGAAACCTACAAAAAAAAAAAAAAAGAGAAAAGGGAGA
GTTCTAGTAAAGGAAAAGAAAAATTAGATGAATCGAAAAGTCGAAATAAGGATTTGAAGTGCTGGAAATATCAAGGGGTTGGTAATTATAGTAGAGATTGTCCTAATAAA
AGAATTATGACCATTAGAGAGGGCGAAATTGTAACAGAAGATGAAGATAATGATGAGAGTGTGAAAGAAGAAATAGATGAAATTGAGGAGTTTAGTGAAGAGGATCCCAC
TCTTATGTCTTTAGTTATTAGACGAGCTTTAAACACCCAAATCAAAAAGTGTCATGACCAAAGGGAGAACTTATTTCAAACTAGTGGTAGTTGCACTAATGTTGTGAGTT
CAATTCTGGTCACAAGACTTAATTTAGAGACCAAACCACATCCTAGACCATATAAACTTCAGTGGTTAAATGATTGTGGGGAAGTGAAAGTGAGTAAGCAAGCTCTTGTT
TCTTTTACCATTGGAAAGTATGCTGATGATATTTTATGCCTTGTCAATTTGACTGTCGTGTATGATGGGTATGCAAATCGTTACTCGTTTACTCATAATGGTAGAAAAAC
TACTCTTCTTCCATTGTTTCCAAAAGATGTATTTCTTGATCAATGTAAACTTGAAAAGAAAAGGCAAGTGGTTGATGCAAAAGAAGAAAGTGAAAATGAAAAGAATGAAA
AAGAAATGAGAGAAAAAAAGAGTTTGAGAGAAAAGCAAGAGAATGATATGCTTGATGAGTTGCATGGTTGTCGTTTTTTTAAGAAGATTGATAAGGTAAAGGCTATAAGA
GATTGGCCTACACCTACTAGTGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCTGGTTTCTATTGTAGGTTCATTAAAGATTTTAGTTCAATTGCTTTACCCTTGAATGA
ACTTGTTAAGAAAAATGTTTCTTTTGTATGGGGAACAGACCAAGAACTTGCTTTTAACACTTTGAAAGAAACATTGAGTTCAGCTCCATTGCTTGCATTACCTAATTTTA
ATGGTTGGAATTTATTGAAACATTCCCTTAAGTTATCAAGTATAAACAAGGTAAGGAGAATATTGTTGCAGATGCTTTATCCCAAAGGTATGCCTTACTCAATGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAATGATTCGAGGAATAGAGGAGTTGACAGAACGTATACGAAGGTTGGAGGTTCAAAACCAAGCTCGAGAGAGACTTCCACCACCTCTAGCGGATGACCACGA
AGATGATTATGAGGGAGATAACTCTGATCATCTAGAGGTTGACCAAGTCACAATGCTTGCAGGACAACGAAAGGAAACCTACAAAAAAAAAAAAAAAGAGAAAAGGGAGA
GTTCTAGTAAAGGAAAAGAAAAATTAGATGAATCGAAAAGTCGAAATAAGGATTTGAAGTGCTGGAAATATCAAGGGGTTGGTAATTATAGTAGAGATTGTCCTAATAAA
AGAATTATGACCATTAGAGAGGGCGAAATTGTAACAGAAGATGAAGATAATGATGAGAGTGTGAAAGAAGAAATAGATGAAATTGAGGAGTTTAGTGAAGAGGATCCCAC
TCTTATGTCTTTAGTTATTAGACGAGCTTTAAACACCCAAATCAAAAAGTGTCATGACCAAAGGGAGAACTTATTTCAAACTAGTGGTAGTTGCACTAATGTTGTGAGTT
CAATTCTGGTCACAAGACTTAATTTAGAGACCAAACCACATCCTAGACCATATAAACTTCAGTGGTTAAATGATTGTGGGGAAGTGAAAGTGAGTAAGCAAGCTCTTGTT
TCTTTTACCATTGGAAAGTATGCTGATGATATTTTATGCCTTGTCAATTTGACTGTCGTGTATGATGGGTATGCAAATCGTTACTCGTTTACTCATAATGGTAGAAAAAC
TACTCTTCTTCCATTGTTTCCAAAAGATGTATTTCTTGATCAATGTAAACTTGAAAAGAAAAGGCAAGTGGTTGATGCAAAAGAAGAAAGTGAAAATGAAAAGAATGAAA
AAGAAATGAGAGAAAAAAAGAGTTTGAGAGAAAAGCAAGAGAATGATATGCTTGATGAGTTGCATGGTTGTCGTTTTTTTAAGAAGATTGATAAGGTAAAGGCTATAAGA
GATTGGCCTACACCTACTAGTGTAAGTGAGGTAAGAAGTTTTCATGGTCTTGCTGGTTTCTATTGTAGGTTCATTAAAGATTTTAGTTCAATTGCTTTACCCTTGAATGA
ACTTGTTAAGAAAAATGTTTCTTTTGTATGGGGAACAGACCAAGAACTTGCTTTTAACACTTTGAAAGAAACATTGAGTTCAGCTCCATTGCTTGCATTACCTAATTTTA
ATGGTTGGAATTTATTGAAACATTCCCTTAAGTTATCAAGTATAAACAAGGTAAGGAGAATATTGTTGCAGATGCTTTATCCCAAAGGTATGCCTTACTCAATGCTTTAA
Protein sequenceShow/hide protein sequence
MERMIRGIEELTERIRRLEVQNQARERLPPPLADDHEDDYEGDNSDHLEVDQVTMLAGQRKETYKKKKKEKRESSSKGKEKLDESKSRNKDLKCWKYQGVGNYSRDCPNK
RIMTIREGEIVTEDEDNDESVKEEIDEIEEFSEEDPTLMSLVIRRALNTQIKKCHDQRENLFQTSGSCTNVVSSILVTRLNLETKPHPRPYKLQWLNDCGEVKVSKQALV
SFTIGKYADDILCLVNLTVVYDGYANRYSFTHNGRKTTLLPLFPKDVFLDQCKLEKKRQVVDAKEESENEKNEKEMREKKSLREKQENDMLDELHGCRFFKKIDKVKAIR
DWPTPTSVSEVRSFHGLAGFYCRFIKDFSSIALPLNELVKKNVSFVWGTDQELAFNTLKETLSSAPLLALPNFNGWNLLKHSLKLSSINKVRRILLQMLYPKGMPYSML