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Sed0002691 (gene) of Chayote v1 genome

Gene IDSed0002691
OrganismSechium edule (Chayote v1)
DescriptionnudC domain-containing protein 2-like
Genome locationLG01:8649808..8651772
RNA-Seq ExpressionSed0002691
SyntenySed0002691
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR007052 - CS domain
IPR008978 - HSP20-like chaperone
IPR037898 - NudC family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607306.1 NudC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.5e-7788.39Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG +VFEWDQTLEE+N+YINLPPNVHSKQFYCKIQS HVE+GIKG  PYLNH+LT PVK D SFWTLED IMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGM
        ASPIQGQGQLDPYSTDL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGG+
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGM

XP_004151457.1 nudC domain-containing protein 2 [Cucumis sativus]1.5e-7787.82Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG +VFEWDQTLEE+NIYINLPPNV+SKQFYCKIQS HVE+GIKG  PYLNH+LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPYS+DL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

XP_008457374.1 PREDICTED: nudC domain-containing protein 2 [Cucumis melo]2.3e-7889.1Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG KVFEWDQTLEE+NIYINLPPNV+SKQFYCKIQS HVEVGIKG  PYLNH+LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPYS+DL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

XP_022964859.1 nudC domain-containing protein 2-like [Cucurbita moschata]2.7e-7989.74Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG KVFEWDQTLEE+NIYINLPPNVHSKQFYCKIQSTHVEVGIKG  PYLNH LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPY+TDL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

XP_038894388.1 nudC domain-containing protein 2 [Benincasa hispida]7.9e-7989.1Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG KVFEWDQTLE++NIYINLPPNVHSKQFYCKIQS HVEVGIKG  P+LNH+LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPYSTDL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

TrEMBL top hitse value%identityAlignment
A0A0A0LV57 CS domain-containing protein7.2e-7887.82Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG +VFEWDQTLEE+NIYINLPPNV+SKQFYCKIQS HVE+GIKG  PYLNH+LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPYS+DL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

A0A1S3C618 nudC domain-containing protein 21.1e-7889.1Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG KVFEWDQTLEE+NIYINLPPNV+SKQFYCKIQS HVEVGIKG  PYLNH+LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPYS+DL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

A0A5A7SMF6 NudC domain-containing protein 21.1e-7889.1Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG KVFEWDQTLEE+NIYINLPPNV+SKQFYCKIQS HVEVGIKG  PYLNH+LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPYS+DL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

A0A6J1HPE6 nudC domain-containing protein 2-like1.3e-7989.74Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG KVFEWDQTLEE+NIYINLPPNVHSKQFYCKIQSTHVEVGIKG  PYLNH LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPY+TDL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

A0A6J1I2V0 nudC domain-containing protein 2-like1.3e-7989.74Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RHSFLHNG KVFEWDQTLEE+NIYINLPPNVHSKQFYCKIQSTHVEVGIKG  PYLNH LT PVK D SFWTLEDDIMHITLQKRDKGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPIQGQGQLDPY+TDL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ

SwissProt top hitse value%identityAlignment
Q5M823 NudC domain-containing protein 21.9e-1940.48Show/hide
Query:  EWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLG
        +W QTLEE+ I + +PP   ++   C +QS HV + + G    L  +L      D   WTLED  M    +T  KRD    W S ++ +   DP+  D  
Subjt:  EWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLG

Query:  QKRLMLQRFQEENPGFDFSQAQFSGN
        Q++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  QKRLMLQRFQEENPGFDFSQAQFSGN

Q8WVJ2 NudC domain-containing protein 21.9e-1940.48Show/hide
Query:  EWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLG
        +W QTLEE+ I + +PP   ++   C +QS HV + + G    L  +L      D   WTLED  M    +T  KRD    W S ++ +   DP+  D  
Subjt:  EWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLG

Query:  QKRLMLQRFQEENPGFDFSQAQFSGN
        Q++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  QKRLMLQRFQEENPGFDFSQAQFSGN

Q9CQ48 NudC domain-containing protein 21.9e-1940.48Show/hide
Query:  EWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLG
        +W QTLEE+ I + +PP   ++   C +QS HV + + G    L  +L      D   WTLED  M    +T  KRD    W S ++ +   DP+  D  
Subjt:  EWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLG

Query:  QKRLMLQRFQEENPGFDFSQAQFSGN
        Q++L L+RFQ+ENPGFDFS A+ SGN
Subjt:  QKRLMLQRFQEENPGFDFSQAQFSGN

Q9LV09 Protein BOBBER 14.6e-1326.58Show/hide
Query:  FEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDD-IMHITLQKRDKGQTWASPIQGQGQLD-----PYS
        + W Q L+E+ + I +P    ++   C+I+   ++VG+KG  P ++ +L R VK D  +W +ED  ++ I L K D+ + W   ++G+ ++D     P +
Subjt:  FEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDD-IMHITLQKRDKGQTWASPIQGQGQLD-----PYS

Query:  TDLG------------------------------QKRLMLQRFQEENPGFDFSQAQFS
        + LG                              QK+ +L++F  E+P  DFS A+F+
Subjt:  TDLG------------------------------QKRLMLQRFQEENPGFDFSQAQFS

Q9STN7 Protein BOBBER 26.0e-1326.58Show/hide
Query:  FEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDD-IMHITLQKRDKGQTWASPIQGQGQLD-----PYS
        + W Q L+E+ I I +P    S+   C+I+   ++VG+KG    ++ +    VK D  FW +ED  ++ + L K+D+ + W   ++G+ ++D     P +
Subjt:  FEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDD-IMHITLQKRDKGQTWASPIQGQGQLD-----PYS

Query:  TDLG------------------------------QKRLMLQRFQEENPGFDFSQAQFS
        + LG                              +K+ ML++F  +NPG DFS A+F+
Subjt:  TDLG------------------------------QKRLMLQRFQEENPGFDFSQAQFS

Arabidopsis top hitse value%identityAlignment
AT4G27890.1 HSP20-like chaperones superfamily protein4.3e-1426.58Show/hide
Query:  FEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDD-IMHITLQKRDKGQTWASPIQGQGQLD-----PYS
        + W Q L+E+ I I +P    S+   C+I+   ++VG+KG    ++ +    VK D  FW +ED  ++ + L K+D+ + W   ++G+ ++D     P +
Subjt:  FEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDD-IMHITLQKRDKGQTWASPIQGQGQLD-----PYS

Query:  TDLG------------------------------QKRLMLQRFQEENPGFDFSQAQFS
        + LG                              +K+ ML++F  +NPG DFS A+F+
Subjt:  TDLG------------------------------QKRLMLQRFQEENPGFDFSQAQFS

AT5G53400.1 HSP20-like chaperones superfamily protein3.3e-1426.58Show/hide
Query:  FEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDD-IMHITLQKRDKGQTWASPIQGQGQLD-----PYS
        + W Q L+E+ + I +P    ++   C+I+   ++VG+KG  P ++ +L R VK D  +W +ED  ++ I L K D+ + W   ++G+ ++D     P +
Subjt:  FEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDD-IMHITLQKRDKGQTWASPIQGQGQLD-----PYS

Query:  TDLG------------------------------QKRLMLQRFQEENPGFDFSQAQFS
        + LG                              QK+ +L++F  E+P  DFS A+F+
Subjt:  TDLG------------------------------QKRLMLQRFQEENPGFDFSQAQFS

AT5G58740.1 HSP20-like chaperones superfamily protein1.1e-7882.69Show/hide
Query:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW
        MAE LAP+ RH F+HNG KVFEWDQTLEE+N+YI LPPNVH K F+CKIQS H+EVGIKG  PYLNH L+ PVK DCSFWTLEDDIMHITLQKR+KGQTW
Subjt:  MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTW

Query:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ
        ASPI GQGQLDPY+TDL QKRLMLQRFQEENPGFDFSQAQFSGNCPDPR+FMGG++
Subjt:  ASPIQGQGQLDPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAAATTTGGCTCCACAAAACCGCCATAGCTTCCTCCACAACGGTCACAAAGTGTTTGAATGGGATCAGACTCTGGAAGAGCTTAACATTTACATTAATCTGCC
TCCAAATGTCCATTCCAAGCAATTTTACTGCAAGATTCAGTCCACGCATGTCGAGGTTGGCATCAAGGGGACTTCTCCTTATCTCAATCACCAACTTACTCGCCCTGTGA
AGGTGGATTGCTCTTTCTGGACGCTAGAGGATGACATAATGCACATCACACTGCAGAAGAGAGACAAGGGTCAGACGTGGGCTTCTCCCATACAGGGTCAGGGTCAACTT
GATCCTTACTCCACTGATCTTGGGCAGAAGCGTCTCATGCTTCAGAGGTTTCAAGAGGAGAATCCTGGATTTGACTTTTCACAAGCGCAATTTTCCGGCAACTGTCCTGA
TCCAAGGACCTTCATGGGTGGAATGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAAATTTGGCTCCACAAAACCGCCATAGCTTCCTCCACAACGGTCACAAAGTGTTTGAATGGGATCAGACTCTGGAAGAGCTTAACATTTACATTAATCTGCC
TCCAAATGTCCATTCCAAGCAATTTTACTGCAAGATTCAGTCCACGCATGTCGAGGTTGGCATCAAGGGGACTTCTCCTTATCTCAATCACCAACTTACTCGCCCTGTGA
AGGTGGATTGCTCTTTCTGGACGCTAGAGGATGACATAATGCACATCACACTGCAGAAGAGAGACAAGGGTCAGACGTGGGCTTCTCCCATACAGGGTCAGGGTCAACTT
GATCCTTACTCCACTGATCTTGGGCAGAAGCGTCTCATGCTTCAGAGGTTTCAAGAGGAGAATCCTGGATTTGACTTTTCACAAGCGCAATTTTCCGGCAACTGTCCTGA
TCCAAGGACCTTCATGGGTGGAATGCAATAA
Protein sequenceShow/hide protein sequence
MAENLAPQNRHSFLHNGHKVFEWDQTLEELNIYINLPPNVHSKQFYCKIQSTHVEVGIKGTSPYLNHQLTRPVKVDCSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQL
DPYSTDLGQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGMQ