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Sed0002702 (gene) of Chayote v1 genome

Gene IDSed0002702
OrganismSechium edule (Chayote v1)
DescriptionpsbQ-like protein 3, chloroplastic
Genome locationLG03:5749586..5750456
RNA-Seq ExpressionSed0002702
SyntenySed0002702
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601995.1 Auxin response factor 8, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6072.58Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAI----AFQSSKIDCTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQV
        MAE SPIS+S L NRIH S S P I     F  +   C+N  + +RRLGLGLIAL+A      TPV + NALDLKLIAPE+SFEEAESGIRGHAEA+LQV
Subjt:  MAESSPISLSTL-NRIHISPSPPAI----AFQSSKIDCTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQV

Query:  RGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        RGLIESESWKEAQ++LR+SS +LKQDLYTII YKPP ERPPLRKLYS+LFNNV+RMDYAARD+D ERV QCYDNI +AISDILSRI
Subjt:  RGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

KAG7032694.1 PsbQ-like protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.8e-6173.66Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAI----AFQSSKIDCTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQV
        MAE SPIS+S L NRIH S S P I     F  +   C+N  + +RRLGLGLIALMA      TPV + NALDLKLIAPE+SFEEAESGIRGHAEA+LQV
Subjt:  MAESSPISLSTL-NRIHISPSPPAI----AFQSSKIDCTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQV

Query:  RGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        RGLIESESWKEAQ++LR+SS +LKQDLYTII YKPPAERPPLRKLYS+LFNNV+RMDYAARD+D ERV QCYDNI +AISDILSRI
Subjt:  RGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

XP_022962345.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita moschata]5.7e-6274.19Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAI----AFQSSKIDCTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQV
        MAE SPIS+S L NRIH S S P I     F  +   C+N  + +RRLGLGLIALMA      TPV + NALDLKLIAPE+SFEEAESGIRGHAEA+LQV
Subjt:  MAESSPISLSTL-NRIHISPSPPAI----AFQSSKIDCTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQV

Query:  RGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        RGLIESESWKEAQ++LR+SS +LKQDLYTII YKPPAERPPLRKLYS+LFNNV+RMDYAARD+D ERV QCYDNIV+AISDILSRI
Subjt:  RGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

XP_022991100.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]8.5e-6676.22Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAIAFQSSKID---CTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVR
        MAE SPIS+S L NRIH S SPP I+FQ   I    C+N  + +RRLGLG +ALMA      TPV++ NALDLKLIAPE+SFEEAESGIRGHAEA+LQVR
Subjt:  MAESSPISLSTL-NRIHISPSPPAIAFQSSKID---CTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVR

Query:  GLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        GLIESESWKEAQ++LRSSS +LKQDLYTII YKPPAERPPLRKLYS+LFNNV+RMDYAARD+D ERVWQCYDNIV+AISDILSRI
Subjt:  GLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

XP_023551782.1 psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]1.4e-6374.21Show/hide
Query:  MAESSPISLSTL-NRIHI-SPSPPAIAFQSSKID---CTN------TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEA
        MAE SPIS+S L NRIH  S SPP I+ Q   I    C+N      + +RRLGLGLIALMA      TPV++ NALDLKLIAPE+SFEEAESGIRGHAEA
Subjt:  MAESSPISLSTL-NRIHI-SPSPPAIAFQSSKID---CTN------TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEA

Query:  LLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        +LQVRGLIESESWKEAQ++LRSSS +LKQDLYTII YKPPAERPPLR+LYS+LFNNV+RMDYAARD+D ERVWQCYDNIV+AISDILSRI
Subjt:  LLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

TrEMBL top hitse value%identityAlignment
A0A0A0KT23 Uncharacterized protein8.6e-5669.57Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAIAFQS--SKIDCTNTTT---RRLGLGLIALMAT-----PVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVRG
        MA+  PISLS L NRIH S SP  I+F S  +  +C+N  T   RRLGLG IALMA+     P EV NALDLKLIAPE+S +EAESGIR HAEALLQVR 
Subjt:  MAESSPISLSTL-NRIHISPSPPAIAFQS--SKIDCTNTTT---RRLGLGLIALMAT-----PVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVRG

Query:  LIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        LIESE+WKEAQ+RLRS+S++LKQDLYTII YKPPAERP LRKLYS+LFNNV+RMDYAARD+DV  VW+ Y  + +AISDILSRI
Subjt:  LIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

A0A5A7VLN5 PsbQ-like protein 34.7e-5467.39Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAIAFQS--SKIDCTNTT---TRRLGLGLIALMAT-----PVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVRG
        MA+  PISLS L NRIH S SP  I+FQS  +  +C+      +RRLGLG IALMA+     P EV NAL+LKLIAPE+S +EAE GIRGHAEALLQVR 
Subjt:  MAESSPISLSTL-NRIHISPSPPAIAFQS--SKIDCTNTT---TRRLGLGLIALMAT-----PVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVRG

Query:  LIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        L+ESE+WKEAQ+RLRS+S++LKQDLYTII YKPPAERP LRKLYS+LFNNV+RMDYAARD+D   V +CY  + +AISDILSRI
Subjt:  LIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

A0A6J1CJL2 psbQ-like protein 3, chloroplastic7.8e-5770.17Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAIAFQSSKI--DCTNTTT---RRLGLGL-IALMAT-PVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVRGLIE
        MAE +PISL +L +R + S SP  ++F+S  I  +C+N  T   RR+GLGL + L  +  V   NALDLKLIAP +SFEEAESGIRGHAEALL+VRGLIE
Subjt:  MAESSPISLSTL-NRIHISPSPPAIAFQSSKI--DCTNTTT---RRLGLGL-IALMAT-PVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVRGLIE

Query:  SESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        SE+WKEAQ+RLRSSS  LKQDL+TII YKPPAERPPLRKLYS+LFNN++RMDYAARDRD ERVW+CY NIV+AISDILSRI
Subjt:  SESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

A0A6J1HES6 psbQ-like protein 3, chloroplastic isoform X12.8e-6274.19Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAI----AFQSSKIDCTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQV
        MAE SPIS+S L NRIH S S P I     F  +   C+N  + +RRLGLGLIALMA      TPV + NALDLKLIAPE+SFEEAESGIRGHAEA+LQV
Subjt:  MAESSPISLSTL-NRIHISPSPPAI----AFQSSKIDCTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQV

Query:  RGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        RGLIESESWKEAQ++LR+SS +LKQDLYTII YKPPAERPPLRKLYS+LFNNV+RMDYAARD+D ERV QCYDNIV+AISDILSRI
Subjt:  RGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

A0A6J1JRX6 psbQ-like protein 3, chloroplastic isoform X14.1e-6676.22Show/hide
Query:  MAESSPISLSTL-NRIHISPSPPAIAFQSSKID---CTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVR
        MAE SPIS+S L NRIH S SPP I+FQ   I    C+N  + +RRLGLG +ALMA      TPV++ NALDLKLIAPE+SFEEAESGIRGHAEA+LQVR
Subjt:  MAESSPISLSTL-NRIHISPSPPAIAFQSSKID---CTN--TTTRRLGLGLIALMA------TPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVR

Query:  GLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI
        GLIESESWKEAQ++LRSSS +LKQDLYTII YKPPAERPPLRKLYS+LFNNV+RMDYAARD+D ERVWQCYDNIV+AISDILSRI
Subjt:  GLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI

SwissProt top hitse value%identityAlignment
Q2V4B2 PsbQ-like protein 3, chloroplastic8.7e-2147.71Show/hide
Query:  PEESFEEAESGIRGHAEALLQVRG-LIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVI
        PE + E A+ G+R +AE + +++  +IE + WKE  + LR S+S +KQD Y II  KPP +RP  R LYS LFN++++MDYAARD D  +V + Y NIV 
Subjt:  PEESFEEAESGIRGHAEALLQVRG-LIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVI

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic3.1e-1032.35Show/hide
Query:  EAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILS
        EA +  +  A+ ++ V+ LI+ ++W   Q  LRS +S L+ DL TII  KP  E+  L+ L + LF+ +  +DYAA+ +   +  + Y   V A++++L+
Subjt:  EAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILS

Query:  RI
        ++
Subjt:  RI

Arabidopsis top hitse value%identityAlignment
AT1G14150.1 PsbQ-like 22.6e-0424.77Show/hide
Query:  KLIAPEESFEEAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDN
        K   P  S E+A + I+  AE L  +R +++  SW+     +R   + L QDL   +   P + R    +  + L  N+S +D+  R   V   +  Y+ 
Subjt:  KLIAPEESFEEAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDN

Query:  IVIAISDIL
         + +I +++
Subjt:  IVIAISDIL

AT2G01918.1 PsbQ-like 36.2e-2247.71Show/hide
Query:  PEESFEEAESGIRGHAEALLQVRG-LIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVI
        PE + E A+ G+R +AE + +++  +IE + WKE  + LR S+S +KQD Y II  KPP +RP  R LYS LFN++++MDYAARD D  +V + Y NIV 
Subjt:  PEESFEEAESGIRGHAEALLQVRG-LIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVI

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

AT4G21280.1 photosystem II subunit QA2.2e-1132.35Show/hide
Query:  EAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILS
        EA +  +  A+ ++ V+ LI+ ++W   Q  LRS +S L+ DL TII  KP  E+  L+ L + LF+ +  +DYAA+ +   +  + Y   V A++++L+
Subjt:  EAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILS

Query:  RI
        ++
Subjt:  RI

AT4G21280.2 photosystem II subunit QA2.2e-1132.35Show/hide
Query:  EAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILS
        EA +  +  A+ ++ V+ LI+ ++W   Q  LRS +S L+ DL TII  KP  E+  L+ L + LF+ +  +DYAA+ +   +  + Y   V A++++L+
Subjt:  EAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVLKQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILS

Query:  RI
        ++
Subjt:  RI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAATCAAGCCCAATCTCTCTCTCAACCCTAAATCGCATCCACATCTCTCCCTCTCCTCCCGCAATCGCCTTCCAATCGTCGAAGATCGATTGCACAAACACAAC
AACCAGAAGATTAGGGCTGGGATTGATAGCGTTAATGGCGACGCCGGTGGAAGTGGTGAACGCTCTGGATCTGAAACTGATCGCGCCGGAGGAGAGCTTCGAGGAGGCGG
AGAGCGGAATCAGAGGCCACGCCGAAGCGCTATTGCAGGTGAGAGGGTTAATCGAATCGGAGTCTTGGAAGGAGGCTCAGAGGCGGCTGAGAAGCAGTTCGTCGGTGCTG
AAGCAGGATCTGTACACTATCATCGGATACAAACCGCCGGCTGAGAGACCTCCGCTCCGGAAACTGTATTCGGTTCTCTTCAACAATGTTAGTCGAATGGATTATGCTGC
GAGAGATAGAGATGTGGAGCGAGTTTGGCAGTGCTACGATAACATTGTGATCGCCATATCTGATATTTTGTCCAGAATTTAG
mRNA sequenceShow/hide mRNA sequence
AAAACTATCCCTTGCATGCGTGGCACTTTCTCAGCTTCTCTCATCCATAAATAAACTAACACAGAGAGAGTTCACACAAAAAGCTTCACTCCGTTCTCCAATGGCGGAAT
CAAGCCCAATCTCTCTCTCAACCCTAAATCGCATCCACATCTCTCCCTCTCCTCCCGCAATCGCCTTCCAATCGTCGAAGATCGATTGCACAAACACAACAACCAGAAGA
TTAGGGCTGGGATTGATAGCGTTAATGGCGACGCCGGTGGAAGTGGTGAACGCTCTGGATCTGAAACTGATCGCGCCGGAGGAGAGCTTCGAGGAGGCGGAGAGCGGAAT
CAGAGGCCACGCCGAAGCGCTATTGCAGGTGAGAGGGTTAATCGAATCGGAGTCTTGGAAGGAGGCTCAGAGGCGGCTGAGAAGCAGTTCGTCGGTGCTGAAGCAGGATC
TGTACACTATCATCGGATACAAACCGCCGGCTGAGAGACCTCCGCTCCGGAAACTGTATTCGGTTCTCTTCAACAATGTTAGTCGAATGGATTATGCTGCGAGAGATAGA
GATGTGGAGCGAGTTTGGCAGTGCTACGATAACATTGTGATCGCCATATCTGATATTTTGTCCAGAATTTAGAACAAATCAATTTCCTCCCTTCTCTGCATTTATGCTGT
TCTTTATTCACTTGCATTTTTAAAAAAAAAAATATATTTTTAAAACAATTAATTAGATTGTGCAAATCAGAAAATTTTGATTCGTAATCAATCCAAGTTGAACTCAAATA
ATAATAATA
Protein sequenceShow/hide protein sequence
MAESSPISLSTLNRIHISPSPPAIAFQSSKIDCTNTTTRRLGLGLIALMATPVEVVNALDLKLIAPEESFEEAESGIRGHAEALLQVRGLIESESWKEAQRRLRSSSSVL
KQDLYTIIGYKPPAERPPLRKLYSVLFNNVSRMDYAARDRDVERVWQCYDNIVIAISDILSRI