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Sed0002713 (gene) of Chayote v1 genome

Gene IDSed0002713
OrganismSechium edule (Chayote v1)
Descriptionprotein TRAUCO
Genome locationLG12:25587865..25588473
RNA-Seq ExpressionSed0002713
SyntenySed0002713
Gene Ontology termsGO:0048731 - system development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450408.1 PREDICTED: protein TRAUCO [Cucumis melo]9.6e-0459.38Show/hide
Query:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ-------SEEDKSTLSESAAA
        P+A EEISE+EPASDDT KS +LAKSP N    ED PLKK KQ        EEDKS L  S +A
Subjt:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ-------SEEDKSTLSESAAA
XP_038878349.1 protein TRAUCO [Benincasa hispida]1.5e-0458.21Show/hide
Query:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ-------SEEDKSTLSESAAALTN
        P+A EEISE+EPASDDT KS +LAKSP N    ED P KK KQ        EEDKS L ES++A  N
Subjt:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ-------SEEDKSTLSESAAALTN
TrEMBL top hitse value%identityAlignment
A0A1S3BPT9 protein TRAUCO4.6e-0459.38Show/hide
Query:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ-------SEEDKSTLSESAAA
        P+A EEISE+EPASDDT KS +LAKSP N    ED PLKK KQ        EEDKS L  S +A
Subjt:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ-------SEEDKSTLSESAAA
A0A5D3D5T3 Protein TRAUCO4.6e-0459.38Show/hide
Query:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ-------SEEDKSTLSESAAA
        P+A EEISE+EPASDDT KS +LAKSP N    ED PLKK KQ        EEDKS L  S +A
Subjt:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ-------SEEDKSTLSESAAA
A0A6J1DLX9 protein TRAUCO7.9e-0452.78Show/hide
Query:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ--------SEEDKSTLSESAAALTNACES
        P+A E+ISE+EPASDDT KS +LAKSP N    ED P KK KQ        +EE KS L ES  A  N   S
Subjt:  PNAFEEISEDEPASDDTNKSVRLAKSPRN----EDRPLKKHKQ--------SEEDKSTLSESAAALTNACES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGATGAGGATGACCCTCGACAACACCCACCCCAACGCATTTGAAGAAATCTCTGAAGATGAACCCGCCTCCGATGACACTAACAAATCCGTCAGATTGGCCAA
ATCCCCTAGGAATGAGGACCGACCTCTGAAAAAGCATAAGCAATCGGAGGAGGACAAATCCACGTTGTCAGAATCCGCTGCGGCTTTGACCAATGCCTGCGAATCCCAAG
AAATCAAAGAAGAAGAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGGATGAGGATGACCCTCGACAACACCCACCCCAACGCATTTGAAGAAATCTCTGAAGATGAACCCGCCTCCGATGACACTAACAAATCCGTCAGATTGGCCAA
ATCCCCTAGGAATGAGGACCGACCTCTGAAAAAGCATAAGCAATCGGAGGAGGACAAATCCACGTTGTCAGAATCCGCTGCGGCTTTGACCAATGCCTGCGAATCCCAAG
AAATCAAAGAAGAAGAACAATAA
Protein sequenceShow/hide protein sequence
MAGMRMTLDNTHPNAFEEISEDEPASDDTNKSVRLAKSPRNEDRPLKKHKQSEEDKSTLSESAAALTNACESQEIKEEEQ