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Sed0002726 (gene) of Chayote v1 genome

Gene IDSed0002726
OrganismSechium edule (Chayote v1)
DescriptionImportin subunit beta-1
Genome locationLG01:63925027..63925284
RNA-Seq ExpressionSed0002726
SyntenySed0002726
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042542.1 importin subunit beta-1 [Cucumis melo var. makuwa]3.8e-1980.28Show/hide
Query:  MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCI--IMKALLTIALAASSRGLVCHGRSGRREASISAP
        MHMGVLS WGPDCI QVF LR TGSCSL VVTNSCI  IMKALLTIALAASSR LVCHGRSG+RE  ++ P
Subjt:  MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCI--IMKALLTIALAASSRGLVCHGRSGRREASISAP
KGN49854.1 hypothetical protein Csa_000509 [Cucumis sativus]1.7e-1981.69Show/hide
Query:  MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCI--IMKALLTIALAASSRGLVCHGRSGRREASISAP
        MHMGVLS WGPDCI QVF LR TGSCSL VVTNSCI  IMKALLTIALAASSR LVCHGRSGRRE  ++ P
Subjt:  MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCI--IMKALLTIALAASSRGLVCHGRSGRREASISAP
TrEMBL top hitse value%identityAlignment
A0A0A0KLW1 Uncharacterized protein8.4e-2081.69Show/hide
Query:  MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCI--IMKALLTIALAASSRGLVCHGRSGRREASISAP
        MHMGVLS WGPDCI QVF LR TGSCSL VVTNSCI  IMKALLTIALAASSR LVCHGRSGRRE  ++ P
Subjt:  MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCI--IMKALLTIALAASSRGLVCHGRSGRREASISAP
A0A5A7TGL2 Importin subunit beta-11.9e-1980.28Show/hide
Query:  MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCI--IMKALLTIALAASSRGLVCHGRSGRREASISAP
        MHMGVLS WGPDCI QVF LR TGSCSL VVTNSCI  IMKALLTIALAASSR LVCHGRSG+RE  ++ P
Subjt:  MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCI--IMKALLTIALAASSRGLVCHGRSGRREASISAP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATGGGTGTGTTGAGTTGTTGGGGTCCAGATTGCATCTCACAAGTCTTCATTCTCAGGGCAACAGGGAGCTGTTCACTTCCAGTTGTCACTAACTCTTGCATCAT
CATGAAAGCATTGCTAACTATTGCATTAGCAGCATCAAGTCGGGGTCTTGTGTGTCATGGTCGAAGTGGGAGGAGAGAAGCATCCATTAGTGCCCCCGGTGGTTCGTATG
GTTTGGTCGGTTCGAATTGTATCTCTGACTTGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGCATATGGGTGTGTTGAGTTGTTGGGGTCCAGATTGCATCTCACAAGTCTTCATTCTCAGGGCAACAGGGAGCTGTTCACTTCCAGTTGTCACTAACTCTTGCATCAT
CATGAAAGCATTGCTAACTATTGCATTAGCAGCATCAAGTCGGGGTCTTGTGTGTCATGGTCGAAGTGGGAGGAGAGAAGCATCCATTAGTGCCCCCGGTGGTTCGTATG
GTTTGGTCGGTTCGAATTGTATCTCTGACTTGAGATAG
Protein sequenceShow/hide protein sequence
MHMGVLSCWGPDCISQVFILRATGSCSLPVVTNSCIIMKALLTIALAASSRGLVCHGRSGRREASISAPGGSYGLVGSNCISDLR