CuGenDBv2

Gene ID	Sed0002755
Organism	Sechium edule (Chayote v1)
Description	Nucleoporin protein Ndc1-Nup
Genome location	LG14:24185826..24190109
RNA-Seq Expression	Sed0002755
Synteny	Sed0002755
Gene Ontology terms	GO:0006999 - nuclear pore organization (biological process) GO:0015031 - protein transport (biological process) GO:0051028 - mRNA transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0070762 - nuclear pore transmembrane ring (cellular component) GO:0030674 - protein binding, bridging (molecular function)
InterPro domains	IPR019049 - Nucleoporin protein Ndc1-Nup

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052512.1 Ndc1_Nup domain-containing protein [Cucumis melo var. makuwa]

1.6e-262

85.71

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Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M+SSSPFFG  EMVVKNRFLGFLIWQ IPST VF LFK FVSAISSVS  +SS+G RNPSAPFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+ELVF LVRFLV  GG NASSAS  KDFRRRA  S  L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+NVTV KFIANQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALNL +GLEG+VD TS LS+QLLPP D  FD+KQLE LKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCARTVS LTARSH ED+FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTNIQSSHDLFGPA IKWAT+SI R+DAS+ KKKSGPL S AYAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
         SIYLIV+AFH+EMLNSAKSGVLEKDWIT EKPPFGTRE LLQKLHIFLDFQA
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

XP_004134593.1 uncharacterized protein LOC101219057 [Cucumis sativus]

2.1e-259

84.45

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Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M+SSSPFFG  EMVVKNRFLGFLIWQ IPST+VF LFK FVSAISSVS  NSS+G R+PSAPFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+ELVF LVRFLV  GG NASSAS  KDFRRRA  S  L++ VVA AVSGSLAAVS+CWGKSDG+RSAW  GLLMGLIYG FYVYKKRWVLMFPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+NVTV KFI NQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALNL +GLEG++D TS LS+QLLPP DS FD+KQL+ LKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCARTVS LTARSH ED+FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTN+QSSH+LFGPA IKWATSSI R+DAS+ KKK+GPL S AYAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
         SIYLIV+AFH+EM+NSAKSGVLEKDWIT EKPPFGTRE LLQKLHIFLDFQA
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

XP_008439582.1 PREDICTED: uncharacterized protein LOC103484335 [Cucumis melo]

2.7e-262

85.71

Show/hide

Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M+SSSPFFG  EMVVKNRFLGFLIWQ IPST VF LFK FVSAISSVS  +SS+G RNPSAPFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+ELVF LVRFLV  GG NASSAS  KDFRRRA  S  L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+NVTV KFIANQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALNL +GLEG+VD TS LS+QLLPP DS FD+KQLE LKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCARTVS LTARSH ED+FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTNIQSSHDLFGPA IKWAT+SI R+DAS+ KKKSGPL   AYAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
         SIYLIV+AFH+EMLNSAKSGVLEKDWIT EKPPFGTRE LLQKLHIFLDFQA
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

XP_022146635.1 uncharacterized protein LOC111015789 [Momordica charantia]

1.8e-263

86.26

Show/hide

Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M SSS FF   +MVVKNRFLGFLIWQSIPST VF LFK FVSAISSVS +NSSSG RNPS PFA LL GFLTFLTFHLSQL+FS+SLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+EL F LVRFLV  GGG ASSAS SKDFRRRAT SL L++ V+A AVSGSLAAVS+CWGKSDG+RSAW+TGL MGLIYGSFYVYKK WVL FPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMG P+AT LASKLS+AAF+FSAVLMVLLPDQFKRNVTV KF+ANQAI+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSEYLFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEE+GETYKRVISISLKPLEQFALNL EGL+GS D TS LSKQLLPP+DS FD+KQLETLKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCARTVS LTARSH+ED+FGVAQLSGSNASVMSTLLSCLLA+EVLMGKKTNIQS HDL GPASIKWATSSI R+DAS+ KKKSGPL S  YAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
        ASIYLIVSAFH+EML+SAKSGVLEKDWIT EKP FGTRE LLQKLHIFLDFQA
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

XP_038882942.1 uncharacterized protein LOC120074035 [Benincasa hispida]

3.8e-261

85.59

Show/hide

Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M+SSSPFFG  EMVVKNRFLGFLIWQSIPST+VF LFK FVSA+SSVS  NSSSG  NPS PFA LLTGFLTFLTFHLSQL+FSASLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNAS--SASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQR
        P+EL F LVRFLV  GG N S  SAS S DFRRRA  S  L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYG FYVYKKRWVL FPIIQR
Subjt:  PIELVFELVRFLV--GGGNAS--SASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQR

Query:  PPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYL
        PPFFSFKMGFP+AT LASKLS+A FLFSAVL++LLPDQ KRNVTV KFIANQAI+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSEYL
Subjt:  PPFFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYL

Query:  FAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNF
        FAALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETGETYKRVISISL+PLEQFALNL EGLEG+VD TS LSKQLLPP+DS  D+KQLETLKNF
Subjt:  FAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNF

Query:  QLYAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADI
        QLYAWCARTVS LTARSH ED+FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKK NIQSSH+LFGPA IKWATSSI R+D S+ KKKSGPL S AYA AD+
Subjt:  QLYAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADI

Query:  LRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
        LRASIYLIVSAFH+EMLNSAKSGVLEKDWIT EKPPFGTRE LLQKLHIFLDFQA
Subjt:  LRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM37 Uncharacterized protein

1.0e-259

84.45

Show/hide

Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M+SSSPFFG  EMVVKNRFLGFLIWQ IPST+VF LFK FVSAISSVS  NSS+G R+PSAPFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+ELVF LVRFLV  GG NASSAS  KDFRRRA  S  L++ VVA AVSGSLAAVS+CWGKSDG+RSAW  GLLMGLIYG FYVYKKRWVLMFPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+NVTV KFI NQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALNL +GLEG++D TS LS+QLLPP DS FD+KQL+ LKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCARTVS LTARSH ED+FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTN+QSSH+LFGPA IKWATSSI R+DAS+ KKK+GPL S AYAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
         SIYLIV+AFH+EM+NSAKSGVLEKDWIT EKPPFGTRE LLQKLHIFLDFQA
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

A0A1S3AZ36 uncharacterized protein LOC103484335

1.3e-262

85.71

Show/hide

Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M+SSSPFFG  EMVVKNRFLGFLIWQ IPST VF LFK FVSAISSVS  +SS+G RNPSAPFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+ELVF LVRFLV  GG NASSAS  KDFRRRA  S  L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+NVTV KFIANQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALNL +GLEG+VD TS LS+QLLPP DS FD+KQLE LKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCARTVS LTARSH ED+FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTNIQSSHDLFGPA IKWAT+SI R+DAS+ KKKSGPL   AYAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
         SIYLIV+AFH+EMLNSAKSGVLEKDWIT EKPPFGTRE LLQKLHIFLDFQA
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

A0A5D3CN15 Ndc1_Nup domain-containing protein

7.5e-263

85.71

Show/hide

Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M+SSSPFFG  EMVVKNRFLGFLIWQ IPST VF LFK FVSAISSVS  +SS+G RNPSAPFA LLTGFLTFLTFHLSQL+FS+SLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+ELVF LVRFLV  GG NASSAS  KDFRRRA  S  L++ VVA AVSGSLAAVS+CWGKSDG+RSAW TGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMGFP+AT LASKLS+A FLFSAVLMVLLPDQ K+NVTV KFIANQ I+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSE+LFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCE NVDIWRRAAFFEETG+TYKRVISISL+PLEQFALNL +GLEG+VD TS LS+QLLPP D  FD+KQLE LKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCARTVS LTARSH ED+FGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKTNIQSSHDLFGPA IKWAT+SI R+DAS+ KKKSGPL S AYAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
         SIYLIV+AFH+EMLNSAKSGVLEKDWIT EKPPFGTRE LLQKLHIFLDFQA
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

A0A6J1CXT0 uncharacterized protein LOC111015789

8.9e-264

86.26

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Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M SSS FF   +MVVKNRFLGFLIWQSIPST VF LFK FVSAISSVS +NSSSG RNPS PFA LL GFLTFLTFHLSQL+FS+SLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+EL F LVRFLV  GGG ASSAS SKDFRRRAT SL L++ V+A AVSGSLAAVS+CWGKSDG+RSAW+TGL MGLIYGSFYVYKK WVL FPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMG P+AT LASKLS+AAF+FSAVLMVLLPDQFKRNVTV KF+ANQAI+FIGSFAVFLSWELTHHLHR+LHTKRF FAPPKGSAAAETNPSEYLFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEE+GETYKRVISISLKPLEQFALNL EGL+GS D TS LSKQLLPP+DS FD+KQLETLKNFQL
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCARTVS LTARSH+ED+FGVAQLSGSNASVMSTLLSCLLA+EVLMGKKTNIQS HDL GPASIKWATSSI R+DAS+ KKKSGPL S  YAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
        ASIYLIVSAFH+EML+SAKSGVLEKDWIT EKP FGTRE LLQKLHIFLDFQA
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

A0A6J1IIC5 uncharacterized protein LOC111477752

2.8e-257

84.81

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Query:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA
        M SSS FFG  EMVVKNRFLGFLIWQSIPST+VF LFK F+S ISSVS ++SSSG  NPSAPFA LLTGFLTFLTFHLSQL+FSASLSLLASPQL RPAA
Subjt:  MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAA

Query:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP
        P+EL F LVRFLV  GG NASSAS SKDF RRA  S  L++ VVA AVSGSLAAVS CWGK+DG+ SAW TGL MGLIYG FYVYKKRWVL FPIIQRPP
Subjt:  PIELVFELVRFLV--GGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPP

Query:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA
        FFSFKMGFP+AT LASKLS+AAFLFSAVLM LLPD  K N TV KFIANQAI+FIGSFAVFLSWELTHHLH++LHTKRF FAPPKGSAAAETNPSEYLFA
Subjt:  FFSFKMGFPAATALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFA

Query:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL
        AL+DSN GSLLQYLAFLDLCMVCE NVDIWRRAAFFEE+GETYKRV+SISL+PLEQFALNL EGLEG+VD TS LSKQLLPP+DS FDLKQLETLKNFQ+
Subjt:  ALEDSNSGSLLQYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQL

Query:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR
        YAWCAR VSMLTARSH EDQFGVAQLSGSNA+VMSTLLSCLLA+EVLMGKKT IQSSHDLFGPA IKWATSSI R+D+S+ KKKSGPL SNAYAIAD+LR
Subjt:  YAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILR

Query:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
        ASIYLIVSAFHDEMLNSAKSGVLEKDWIT EK PFGTRE LLQKLHIFLDF+A
Subjt:  ASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G73240.1 CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

8.8e-139

50.55

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Query:  EMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRF
        E VV +RF  FLIWQSIPS+ +F  F  F+ + +S+                   ++   TFL FH SQL+FS SL+LL+SP    P +P++    L R 
Subjt:  EMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVRF

Query:  LVGGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSD--GVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPPFFSFKMGFPAA
        L             +FRRRA  S  +++ V A +++G  ++   C        +      GL+ GL+Y   +V K+RWVL FPIIQRPPFFSFK+G P+A
Subjt:  LVGGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSD--GVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPPFFSFKMGFPAA

Query:  TALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFAALEDSNSGSLL
           A KLS   ++ S ++++ L D     V+V KF+  Q + + GSF + LSWE+THH+H++LHTKRF+FAPPKGSAAAETNPSE L AALE S  GSL 
Subjt:  TALASKLSSAAFLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFAALEDSNSGSLL

Query:  QYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSML
        Q LA+LDL MV +NNVD WRRAAFFEE+ ETYKRVI++ L+PLE+ A  L  GL+ +  T       L PP +S  D K  E+LK+FQLYAWCA+T + L
Subjt:  QYLAFLDLCMVCENNVDIWRRAAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSML

Query:  TARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILRASIYLIVSAFH
        T+ SH ED+ GVAQLSG NA V+STLLS LLAIE  MGKKTN+QS   L GPASIKWATSS+ R D    K+  G + + AYA  D+LR S+Y I+S F 
Subjt:  TARSHAEDQFGVAQLSGSNASVMSTLLSCLLAIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILRASIYLIVSAFH

Query:  DEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA
        DEMLNS ++G+L +DWI S+KPPFGT + LLQKL +FL+FQA
Subjt:  DEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCATCTTCTCCATTTTTCGGCCTCTCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTCATTTGGCAGTCAATTCCTTCAACCCTCGTCTTCATCCTCTT
CAAATTCTTCGTTTCCGCCATTTCTTCAGTTTCTGATGCCAATTCCTCAAGTGGGTTCCGAAACCCATCAGCCCCTTTTGCTTATTTGCTCACTGGGTTTCTCACTTTTC
TCACATTTCATCTCTCTCAGCTCATCTTCTCTGCTTCCCTCTCTCTCCTTGCTTCGCCCCAGCTCCACCGCCCCGCCGCGCCGATCGAGCTCGTTTTCGAGCTCGTTCGG
TTTCTTGTTGGCGGTGGCAATGCCTCATCGGCTTCGGATTCCAAGGATTTTCGCCGCCGGGCTACTTTTTCGTTGTGCTTGCTTGTTTCTGTTGTGGCAATGGCGGTTTC
GGGTTCATTGGCGGCGGTTTCTGTATGTTGGGGGAAATCGGATGGTGTTAGAAGTGCCTGGATTACTGGTCTATTGATGGGTTTGATTTATGGATCTTTCTATGTTTACA
AGAAAAGATGGGTTCTAATGTTCCCAATCATACAGCGACCTCCTTTTTTCAGCTTCAAGATGGGTTTTCCGGCAGCTACCGCGTTGGCTTCCAAACTTTCTTCTGCGGCT
TTCCTATTTTCAGCAGTATTAATGGTGCTTTTGCCGGATCAATTTAAGAGAAATGTTACAGTCATGAAGTTCATAGCCAACCAGGCCATTATTTTCATTGGAAGCTTTGC
AGTATTTCTTTCTTGGGAGTTGACACATCACTTGCATCGGATCTTACATACCAAGAGGTTCACTTTTGCACCTCCAAAGGGATCTGCAGCTGCAGAAACAAATCCTAGTG
AGTACCTCTTTGCAGCTTTGGAGGACAGCAACTCAGGGTCTCTTTTGCAATATCTTGCATTCCTTGATCTCTGCATGGTTTGTGAGAATAATGTCGATATATGGAGGAGA
GCTGCATTTTTCGAAGAAACGGGTGAGACGTATAAGCGAGTTATATCCATATCCTTGAAGCCTCTGGAGCAATTTGCCCTGAACTTATGTGAAGGTTTGGAAGGTTCTGT
GGACACAACCTCCCTACTATCCAAACAGTTATTACCACCAGAGGACTCTCGTTTCGACTTAAAACAGTTGGAAACTCTTAAAAACTTTCAGTTGTATGCATGGTGTGCTC
GAACGGTTTCTATGTTGACTGCACGCTCACATGCCGAAGATCAATTTGGGGTTGCCCAACTCTCTGGTAGTAATGCTTCTGTTATGTCAACGCTGTTGTCTTGCCTACTT
GCTATTGAAGTGTTGATGGGGAAAAAGACTAATATACAATCTTCACACGATTTATTCGGTCCGGCTAGTATTAAATGGGCAACATCAAGTATCGGAAGACTCGATGCTTC
AATCAGCAAAAAGAAAAGCGGTCCGCTACAATCAAACGCGTATGCTATTGCAGACATATTGAGGGCATCGATCTATCTCATTGTTTCTGCATTCCATGATGAGATGCTCA
ACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACTAGTGAAAAGCCCCCTTTTGGTACTCGTGAGTTCCTTCTACAGAAATTGCATATTTTCTTGGATTTTCAA
GCTTAG

mRNA sequence

Show/hide mRNA sequence

AAGAAGCTTTGTACCTTCGAACAAGTTGAATTTGCAGACGAAATTAGAATCGCCATTGAAGCATCGAACTTATAAACCACTCTTAAACCCTTATTTCCTAACCAAAGATT
CAAAAAACCCACTTAGATTTTGATTCTGCAGAAACGAAGTGAAGAACTTACTCTAAAATGGCTTCATCTTCTCCATTTTTCGGCCTCTCAGAAATGGTTGTCAAGAATCG
CTTTCTGGGTTTCCTCATTTGGCAGTCAATTCCTTCAACCCTCGTCTTCATCCTCTTCAAATTCTTCGTTTCCGCCATTTCTTCAGTTTCTGATGCCAATTCCTCAAGTG
GGTTCCGAAACCCATCAGCCCCTTTTGCTTATTTGCTCACTGGGTTTCTCACTTTTCTCACATTTCATCTCTCTCAGCTCATCTTCTCTGCTTCCCTCTCTCTCCTTGCT
TCGCCCCAGCTCCACCGCCCCGCCGCGCCGATCGAGCTCGTTTTCGAGCTCGTTCGGTTTCTTGTTGGCGGTGGCAATGCCTCATCGGCTTCGGATTCCAAGGATTTTCG
CCGCCGGGCTACTTTTTCGTTGTGCTTGCTTGTTTCTGTTGTGGCAATGGCGGTTTCGGGTTCATTGGCGGCGGTTTCTGTATGTTGGGGGAAATCGGATGGTGTTAGAA
GTGCCTGGATTACTGGTCTATTGATGGGTTTGATTTATGGATCTTTCTATGTTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGCGACCTCCTTTTTTCAGC
TTCAAGATGGGTTTTCCGGCAGCTACCGCGTTGGCTTCCAAACTTTCTTCTGCGGCTTTCCTATTTTCAGCAGTATTAATGGTGCTTTTGCCGGATCAATTTAAGAGAAA
TGTTACAGTCATGAAGTTCATAGCCAACCAGGCCATTATTTTCATTGGAAGCTTTGCAGTATTTCTTTCTTGGGAGTTGACACATCACTTGCATCGGATCTTACATACCA
AGAGGTTCACTTTTGCACCTCCAAAGGGATCTGCAGCTGCAGAAACAAATCCTAGTGAGTACCTCTTTGCAGCTTTGGAGGACAGCAACTCAGGGTCTCTTTTGCAATAT
CTTGCATTCCTTGATCTCTGCATGGTTTGTGAGAATAATGTCGATATATGGAGGAGAGCTGCATTTTTCGAAGAAACGGGTGAGACGTATAAGCGAGTTATATCCATATC
CTTGAAGCCTCTGGAGCAATTTGCCCTGAACTTATGTGAAGGTTTGGAAGGTTCTGTGGACACAACCTCCCTACTATCCAAACAGTTATTACCACCAGAGGACTCTCGTT
TCGACTTAAAACAGTTGGAAACTCTTAAAAACTTTCAGTTGTATGCATGGTGTGCTCGAACGGTTTCTATGTTGACTGCACGCTCACATGCCGAAGATCAATTTGGGGTT
GCCCAACTCTCTGGTAGTAATGCTTCTGTTATGTCAACGCTGTTGTCTTGCCTACTTGCTATTGAAGTGTTGATGGGGAAAAAGACTAATATACAATCTTCACACGATTT
ATTCGGTCCGGCTAGTATTAAATGGGCAACATCAAGTATCGGAAGACTCGATGCTTCAATCAGCAAAAAGAAAAGCGGTCCGCTACAATCAAACGCGTATGCTATTGCAG
ACATATTGAGGGCATCGATCTATCTCATTGTTTCTGCATTCCATGATGAGATGCTCAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACTAGTGAAAAGCCC
CCTTTTGGTACTCGTGAGTTCCTTCTACAGAAATTGCATATTTTCTTGGATTTTCAAGCTTAGATATGATGGTGATTTCGTTTTCTCGACTCCGTCCCGTTTAGCAAATT
ATACCGAATCACTAGTGAGGCAGCTTTGTTGTCTTTGTTTCTAAAGAGTTACAGTTGGAATGTGAAGAGCTTGTTGCTTGTTAGACTGATGGAAAGTTCACAAACTAAGT
TGGAATAACTTGGTAAGTTTGTAATACATTTGGCCTTTTATGAACACCAATATTTTAGTTGAGTCTGTCTTGTTGATAACACTTGGAATTTCTTAATCTTTTGTAGCTCT
CATTTTCCACCA

Protein sequence

Show/hide protein sequence

MASSSPFFGLSEMVVKNRFLGFLIWQSIPSTLVFILFKFFVSAISSVSDANSSSGFRNPSAPFAYLLTGFLTFLTFHLSQLIFSASLSLLASPQLHRPAAPIELVFELVR
FLVGGGNASSASDSKDFRRRATFSLCLLVSVVAMAVSGSLAAVSVCWGKSDGVRSAWITGLLMGLIYGSFYVYKKRWVLMFPIIQRPPFFSFKMGFPAATALASKLSSAA
FLFSAVLMVLLPDQFKRNVTVMKFIANQAIIFIGSFAVFLSWELTHHLHRILHTKRFTFAPPKGSAAAETNPSEYLFAALEDSNSGSLLQYLAFLDLCMVCENNVDIWRR
AAFFEETGETYKRVISISLKPLEQFALNLCEGLEGSVDTTSLLSKQLLPPEDSRFDLKQLETLKNFQLYAWCARTVSMLTARSHAEDQFGVAQLSGSNASVMSTLLSCLL
AIEVLMGKKTNIQSSHDLFGPASIKWATSSIGRLDASISKKKSGPLQSNAYAIADILRASIYLIVSAFHDEMLNSAKSGVLEKDWITSEKPPFGTREFLLQKLHIFLDFQ
A

Sed0002755 (gene) of Chayote v1 genome