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Sed0002759 (gene) of Chayote v1 genome

Gene IDSed0002759
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand
Genome locationLG10:27449363..27449705
RNA-Seq ExpressionSed0002759
SyntenySed0002759
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585661.1 putative calcium-binding protein CML15, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3377.17Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC
        MGN+KS TYKRVLVP +EEQL+D+FKSHD+DGDGKL+KEELKQAF YLGSRFS+FRA+EALR  D + DG +SMD+MNKLIQYTK RKYT+C
Subjt:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]9.2e-3583.7Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC
        MGN+KS TYKRVLVP TEEQL  +FKSHD+DGDGKLTKEELKQAF YLGSRFSSFRA EALRAADA GDGTI+M +M+KLIQYTK RKYTLC
Subjt:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC

KAG6585663.1 hypothetical protein SDJN03_18396, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3380.43Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC
        MGNAKST YKRVLVPFTEEQL  +FKSHD+DGDGKL+KEELKQAF YLGSRFSSFR KEALRAAD +GDG ISMD+MNKLI+YTKA   ++C
Subjt:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]6.6e-3380.43Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC
        MGN+KS TYKRVLVPF+EEQL  VFK+HD DGDGKLTKEELKQAF YLGSRFSSFR +EALRAAD  GDG ISM +M KLIQY K+RKYTLC
Subjt:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-3684.78Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC
        MGNAKST YKRVLVPFTEEQL  +FKSHD+DGDGKL+KEELKQAF YLGSRFSSFR KEALRAAD +GDG ISMD+MNKLI+YTK RKYTLC
Subjt:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0LRB6 Uncharacterized protein7.9e-3275.82Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL
        MGN+KS TYKRVLVPF+EEQL +VFK+HD+DGDG LTKEELKQAF+YLGSRF +FR +EALRAAD +GDG ISMD+M KLI+Y K RKYT+
Subjt:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL

A0A2N9FYQ0 Uncharacterized protein5.9e-1952.87Show/hide
Query:  KSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL
        K  ++KR  +PFTEEQL+++FKSHD DGDGKL+++E+K+AFKYLGSR+ ++RA +A+  ADA  DG I  +++ KL+QY     YT+
Subjt:  KSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.6e-3276.92Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL
        MGN+KS TYKRVLVPF+EEQL +VFK+HD+DGDG LTKEELKQAF+YLGSRFS+FR +EALRAAD +GDG ISMD+M KLI+Y K RKYT+
Subjt:  MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL

A0A5A7VBH2 Calcium-binding EF-hand6.1e-1650.6Show/hide
Query:  YKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL
        YKR  VPF+ +QL D+F  HD DGDG+L++ ELK AF  LGS +S FRA+++L+AADA GDG +++D+++ L+ Y   R+Y +
Subjt:  YKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL

A0A7N2KRS3 Uncharacterized protein4.5e-1954.02Show/hide
Query:  KSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL
        K+  +KR  VPF E+QL+++FKSHD DGDGKL+++ELK AFKYLGSR+ ++R  +ALR ADA+ DG I+ D++ KL++Y     YT+
Subjt:  KSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTL

SwissProt top hitse value%identityAlignment
A3E4F9 Calmodulin9.4e-0635.38Show/hide
Query:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI
        TEE+L++ FK  D+DG+G ++  EL+     LG + +     E +R AD  GDG I+ ++  K++
Subjt:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI

A4UHC0 Calmodulin9.4e-0635.38Show/hide
Query:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI
        TEE+L++ FK  D+DG+G ++  EL+     LG + +     E +R AD  GDG I+ ++  K++
Subjt:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI

A8I1Q0 Calmodulin9.4e-0635.38Show/hide
Query:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI
        TEE+L++ FK  D+DG+G ++  EL+     LG + +     E +R AD  GDG I+ ++  K++
Subjt:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI

P24044 Calmodulin1.9e-0635.38Show/hide
Query:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI
        TEE+L++ F+  D+DGDG ++ +EL+     LG + ++    E +R AD  GDG I+ ++  K++
Subjt:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI

P62203 Calmodulin1.9e-0635.38Show/hide
Query:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI
        TEE+L++ F+  D+DGDG ++ +EL+     LG + ++    E +R AD  GDG I+ ++  K++
Subjt:  TEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI

Arabidopsis top hitse value%identityAlignment
AT3G25600.1 Calcium-binding EF-hand family protein2.5e-0632.88Show/hide
Query:  VPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKA
        V   +EQL++VF+S D+DG+G +T  EL  +   +G   +     E +  AD++GDG IS ++ + ++  + A
Subjt:  VPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKA

AT3G51920.1 calmodulin 91.9e-0633.33Show/hide
Query:  EQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI
        ++L++VF+  D+DGDG +++ EL +  K +G + ++  A+  +R AD  GDG +S  + +K++
Subjt:  EQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLI

AT4G23650.1 calcium-dependent protein kinase 64.3e-0634.67Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLV---DVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTI
        M   K    K +    +EE+++   ++FKS D D +G +T EEL+     LGS+ S    ++ + AAD  GDG+I
Subjt:  MGNAKSTTYKRVLVPFTEEQLV---DVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTI

AT5G12180.1 calcium-dependent protein kinase 176.6e-0734.67Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLV---DVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTI
        M N K    + +    +EE+++   ++FK  D D  G +T EEL+Q     G+R S +  ++ + AADA G+GTI
Subjt:  MGNAKSTTYKRVLVPFTEEQLV---DVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTI

AT5G19360.1 calcium-dependent protein kinase 346.6e-0734.67Show/hide
Query:  MGNAKSTTYKRVLVPFTEEQLV---DVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTI
        M N K    + +    +EE+++   ++FK  D D  G +T EEL+Q     G+R S +  ++ + AADA G+GTI
Subjt:  MGNAKSTTYKRVLVPFTEEQLV---DVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATGCCAAAAGTACAACTTACAAACGAGTTTTGGTTCCATTCACAGAGGAGCAATTGGTGGATGTTTTCAAGAGCCATGACCAGGATGGCGATGGGAAACTGAC
GAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCACGTTTCAGCTCTTTTCGAGCCAAAGAAGCCCTACGAGCTGCCGATGCTCACGGCGACGGCACCATTAGCA
TGGATCAAATGAACAAGCTTATTCAATATACCAAAGCCCGTAAATACACTCTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
CAAAACCATACCAATTGTAAGGACCCAAAACAAAATTCTGATTCCCTTTTGGTGTTGTTCTTTAATGGGGAATGCCAAAAGTACAACTTACAAACGAGTTTTGGTTCCAT
TCACAGAGGAGCAATTGGTGGATGTTTTCAAGAGCCATGACCAGGATGGCGATGGGAAACTGACGAAGGAGGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCACGTTTC
AGCTCTTTTCGAGCCAAAGAAGCCCTACGAGCTGCCGATGCTCACGGCGACGGCACCATTAGCATGGATCAAATGAACAAGCTTATTCAATATACCAAAGCCCGTAAATA
CACTCTTTGTTAA
Protein sequenceShow/hide protein sequence
MGNAKSTTYKRVLVPFTEEQLVDVFKSHDQDGDGKLTKEELKQAFKYLGSRFSSFRAKEALRAADAHGDGTISMDQMNKLIQYTKARKYTLC