; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002771 (gene) of Chayote v1 genome

Gene IDSed0002771
OrganismSechium edule (Chayote v1)
DescriptionF-box protein SNE-like
Genome locationLG01:4243000..4244221
RNA-Seq ExpressionSed0002771
SyntenySed0002771
Gene Ontology termsGO:0009937 - regulation of gibberellic acid mediated signaling pathway (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily
IPR044184 - F-box protein SNE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060791.1 F-box protein SNE [Cucumis melo var. makuwa]4.4e-6683.01Show/hide
Query:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PE   K+R+F+INDNLDILIEILKRLDGPS+GVA CVCRLWC IARSESVWEQ+CFR++ SPLP SVK+VVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        S++V RRVWT+DE+QLSLSLFCVD YERL GSGR+GGDA+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
XP_004140002.1 F-box protein SNE [Cucumis sativus]6.7e-6783.66Show/hide
Query:  MQKNHVPEP--KRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PEP  KRR+F+INDNLDILIEILKRLDGPS+GVA CVCRLWC IARSESVWEQ+CFR++ SPLP SVK+VVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPEP--KRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        S++V RRVWT+DE+QLSLSLFCVD YERL GSGR+GG+A+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
XP_016903159.1 PREDICTED: F-box protein SNE [Cucumis melo]1.7e-6582.35Show/hide
Query:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PE   K+R+F+IND+LDILIEILKRLDGPS+GVA CVCRLWC IARSESVWEQ+CFR++ SPLP SVK+VVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        S++V RRVWT+DE+QLSLSLFCVD YERL GSGR+GGDA+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
XP_022947535.1 F-box protein SNE-like [Cucurbita moschata]3.0e-6785.62Show/hide
Query:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PE   KRR+F+INDNLDILIEILKRLDGPS+GVAACVCRLWC IAR+ESVWE +CFR++TSPLP SVKSVVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        SEVV RRVWT+DE+QLSLSLFCVD YERL GSGRL GDA+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
XP_038902594.1 F-box protein SNE [Benincasa hispida]2.1e-6885.62Show/hide
Query:  MQKNHVPEP--KRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PEP  KRR+F+INDNLDILIEILKRLDGPS+GVA CVCRLWC IARSESVWEQ+CFR++TSPLP SVKSVVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPEP--KRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        S++V RRVWT+DE+QLSLSLFCVD YERL GSGR+GGDA+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
TrEMBL top hitse value%identityAlignment
A0A0A0KAT5 F-box domain-containing protein3.3e-6783.66Show/hide
Query:  MQKNHVPEP--KRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PEP  KRR+F+INDNLDILIEILKRLDGPS+GVA CVCRLWC IARSESVWEQ+CFR++ SPLP SVK+VVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPEP--KRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        S++V RRVWT+DE+QLSLSLFCVD YERL GSGR+GG+A+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
A0A5A7V4V6 F-box protein SNE2.1e-6683.01Show/hide
Query:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PE   K+R+F+INDNLDILIEILKRLDGPS+GVA CVCRLWC IARSESVWEQ+CFR++ SPLP SVK+VVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        S++V RRVWT+DE+QLSLSLFCVD YERL GSGR+GGDA+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
A0A6J1G764 F-box protein SNE-like1.5e-6785.62Show/hide
Query:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PE   KRR+F+INDNLDILIEILKRLDGPS+GVAACVCRLWC IAR+ESVWE +CFR++TSPLP SVKSVVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        SEVV RRVWT+DE+QLSLSLFCVD YERL GSGRL GDA+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
A0A6J1I140 F-box protein SNE-like1.5e-6785.62Show/hide
Query:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PE   KRR+F+INDNLDILIEILKRLDGPS+GVAACVCRLWC IAR+ESVWE +CFR++TSPLP SVKSVVAALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPE--PKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        SEVV RRVWT+DE+QLSLSLFCVD YERL GSGRL GDA+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
A0A6J1JCA9 F-box protein SNE-like8.0e-6683.12Show/hide
Query:  MQKNHVPEP--KRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC
        MQKNH+PEP  KRR+F+INDNLDILIEILKRLDGPS+GVA CVCRLWC IARSESVWEQ+CFR++TSPLP SVKSVV ALGGYKRLYMVSIRPVLSRLG 
Subjt:  MQKNHVPEP--KRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGC

Query:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRL-GGDAAALSLMFLCNTVNV
        S+++ RRVWT++E+QLSLSLFCVD YERL G+GRL GGDA+ALSLMFLCNTVNV
Subjt:  SEVVRRRVWTRDEIQLSLSLFCVDCYERLAGSGRL-GGDAAALSLMFLCNTVNV
SwissProt top hitse value%identityAlignment
Q7XAK4 F-box protein GID21.4e-1135.09Show/hide
Query:  DILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSP--LPPSVKSVVAALGGYKRLYMVSIRPVLSR-LGCSEVVRRRV----WTRDEIQ
        D++ E+L+R +  ++  AACV R W ++A  E +WE  C R   +       +++VV +LGG++RL+ V IRP+  R  G      RR       RD++Q
Subjt:  DILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSP--LPPSVKSVVAALGGYKRLYMVSIRPVLSR-LGCSEVVRRRV----WTRDEIQ

Query:  LSLSLFCVDCYERL
        LSLSLF +  ++ +
Subjt:  LSLSLFCVDCYERL
Q9LUB6 F-box protein SNE2.7e-3454.35Show/hide
Query:  FVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRDEIQ
        F IND+ D+L+EIL+RLDG S+  AACVCRLW  +AR++S+WE++CFR ++     S++SVV+ALGGY+ LY + IRPVL+RL       + +WTRD++Q
Subjt:  FVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRDEIQ

Query:  LSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        LSLSL+CV  YERL     L GDA   SL+FL   VNV
Subjt:  LSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
Q9STX3 F-box protein GID28.4e-1233.05Show/hide
Query:  NLD--ILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTS--PLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRDEIQL
        NLD  ++ E+LK +D  ++ +++CV ++W + A+ E +WE IC R+ T+       ++SVV ALGG++RL+ + + P+      S+   R  + +DE++L
Subjt:  NLD--ILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTS--PLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRDEIQL

Query:  SLSLFCVDCYERLAGSGR
        +LSL  +  YE+++ + R
Subjt:  SLSLFCVDCYERLAGSGR
Arabidopsis top hitse value%identityAlignment
AT4G24210.1 F-box family protein6.0e-1333.05Show/hide
Query:  NLD--ILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTS--PLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRDEIQL
        NLD  ++ E+LK +D  ++ +++CV ++W + A+ E +WE IC R+ T+       ++SVV ALGG++RL+ + + P+      S+   R  + +DE++L
Subjt:  NLD--ILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTS--PLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRDEIQL

Query:  SLSLFCVDCYERLAGSGR
        +LSL  +  YE+++ + R
Subjt:  SLSLFCVDCYERLAGSGR
AT5G48170.1 F-box family protein1.9e-3554.35Show/hide
Query:  FVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRDEIQ
        F IND+ D+L+EIL+RLDG S+  AACVCRLW  +AR++S+WE++CFR ++     S++SVV+ALGGY+ LY + IRPVL+RL       + +WTRD++Q
Subjt:  FVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRDEIQ

Query:  LSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV
        LSLSL+CV  YERL     L GDA   SL+FL   VNV
Subjt:  LSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGAATCACGTACCTGAGCCGAAGCGGCGGAGGTTCGTAATCAACGACAATCTCGACATTCTCATCGAAATCCTCAAGCGACTGGACGGACCGTCCATCGGCGT
CGCCGCCTGCGTCTGCCGCCTCTGGTGCAGGATCGCTCGAAGCGAATCTGTTTGGGAACAGATCTGCTTCCGTAATCTGACGTCGCCGCTTCCGCCATCGGTGAAATCGG
TGGTGGCGGCGCTGGGAGGGTACAAGCGGCTGTACATGGTGAGCATACGACCGGTGCTGAGTCGACTCGGGTGCTCGGAGGTGGTGCGGCGGCGAGTTTGGACTCGGGAT
GAGATTCAACTCTCTCTGTCTTTGTTCTGTGTGGATTGTTACGAGCGGCTCGCCGGAAGTGGGAGACTCGGCGGCGATGCGGCGGCATTGTCGCTCATGTTTCTCTGCAA
CACCGTCAACGTCTGA
mRNA sequenceShow/hide mRNA sequence
AGTGGCTATCATGGATTGAACTCCATAATCTCTTAGATTCACAAGATCTTCTTTGACCACTAAATCAACTCATTTGGTTGACATCCAAACGAGAATCGAATGAACAATGT
TAAGACCTGGTCCCCATACTAAAGTATATATATATCCATGCTTGTTCTCACCAGACATACTGATAACGCTGAACCCTACAACATTTAGATGTAAAAAAAATTCGAAAAAA
ATTAATTCTTGAATAGGTGGCCCGCATGGATTGAAGCTATCACGTCGTAGTTCCTGAAGACCTTTTTTTACCACTAGGGCACTCAATGTGAGGTTTAAAAGGCTTTAACA
TTAAAAGTGTGGTTCCCAAATCACAACGGATACATGCCCAAAGTCTTGGAATATGCACACAAACACACAACCTAAGCCCCAAAACCAATTTTGTAAAGAAAAAAGAAACC
AAAGAAAGAGAAGGTTAAACAGCATTGCATTCCCATTGATTTGCATTGGTTTGAGGATTTTTTTGGTTTGGAGGCTTATTCTTTGGCCCCATCTCCACCCTCCTCGATAC
CCTCTCTCAATCCTTCTCACAGACATTTTCACAAACACGCAGACTTCGAGAATCGAGAAGCACAGCAACACAAATCCTATCCTACACTTTTTCTCCTTGTTCATCAATTT
TCACCAAATCTATCTATCTATTGTCAATTCCATATATAATCAGAGAACCAGAGCATTTCCACCAAACCAAATCCCTAATCAATCTAGGGCATAAAACGCAACAATAATGC
AGAAGAATCACGTACCTGAGCCGAAGCGGCGGAGGTTCGTAATCAACGACAATCTCGACATTCTCATCGAAATCCTCAAGCGACTGGACGGACCGTCCATCGGCGTCGCC
GCCTGCGTCTGCCGCCTCTGGTGCAGGATCGCTCGAAGCGAATCTGTTTGGGAACAGATCTGCTTCCGTAATCTGACGTCGCCGCTTCCGCCATCGGTGAAATCGGTGGT
GGCGGCGCTGGGAGGGTACAAGCGGCTGTACATGGTGAGCATACGACCGGTGCTGAGTCGACTCGGGTGCTCGGAGGTGGTGCGGCGGCGAGTTTGGACTCGGGATGAGA
TTCAACTCTCTCTGTCTTTGTTCTGTGTGGATTGTTACGAGCGGCTCGCCGGAAGTGGGAGACTCGGCGGCGATGCGGCGGCATTGTCGCTCATGTTTCTCTGCAACACC
GTCAACGTCTGA
Protein sequenceShow/hide protein sequence
MQKNHVPEPKRRRFVINDNLDILIEILKRLDGPSIGVAACVCRLWCRIARSESVWEQICFRNLTSPLPPSVKSVVAALGGYKRLYMVSIRPVLSRLGCSEVVRRRVWTRD
EIQLSLSLFCVDCYERLAGSGRLGGDAAALSLMFLCNTVNV