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Sed0002850 (gene) of Chayote v1 genome

Gene IDSed0002850
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:5797014..5798403
RNA-Seq ExpressionSed0002850
SyntenySed0002850
Gene Ontology termsNA
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52438.1 hypothetical protein Csa_008032 [Cucumis sativus]7.0e-0546.91Show/hide
Query:  MTKFSFSLFFLV-LLFSVVLI-VPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYP-QSTSQCIAFPPFPFTYACYCFF
        M++ S S FF+V LL SV  + +P+  +A V   C  KLYD GC  +EC  +C  KYP  S+SQC++ PP PF  AC CF+
Subjt:  MTKFSFSLFFLV-LLFSVVLI-VPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYP-QSTSQCIAFPPFPFTYACYCFF

KGN52439.1 hypothetical protein Csa_009048 [Cucumis sativus]5.4e-1353.85Show/hide
Query:  MTKFSFSLFFL-VLLFSVVLIVPQATHAVVVRKCEKKLYDGCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFF
        M KFS SLFF+   L S   I+P    A    KCE KLYDGC P++C  KC  KYP S+S+C+A PP PF Y+CYCF+
Subjt:  MTKFSFSLFFL-VLLFSVVLIVPQATHAVVVRKCEKKLYDGCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFF

XP_022923678.1 putative defensin-like protein 129 [Cucurbita moschata]7.0e-0540.24Show/hide
Query:  MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTK
        M KF   L FL+L+ SV L++P+A  A     C ++LY+ GC+   C  +C +KY  ST +C+  P  P   AC CFF   K
Subjt:  MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTK

XP_022990690.1 putative defensin-like protein 129 [Cucurbita maxima]2.0e-0439.02Show/hide
Query:  MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTK
        M KF   L FL+L+ S  L++P+A  A     C ++LY+ GC+   C  +C +KY  ST +C+  P  P   AC CFF   K
Subjt:  MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTK

TrEMBL top hitse value%identityAlignment
A0A0A0KS76 Uncharacterized protein3.4e-0546.91Show/hide
Query:  MTKFSFSLFFLV-LLFSVVLI-VPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYP-QSTSQCIAFPPFPFTYACYCFF
        M++ S S FF+V LL SV  + +P+  +A V   C  KLYD GC  +EC  +C  KYP  S+SQC++ PP PF  AC CF+
Subjt:  MTKFSFSLFFLV-LLFSVVLI-VPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYP-QSTSQCIAFPPFPFTYACYCFF

A0A0A0KU45 Uncharacterized protein2.6e-1353.85Show/hide
Query:  MTKFSFSLFFL-VLLFSVVLIVPQATHAVVVRKCEKKLYDGCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFF
        M KFS SLFF+   L S   I+P    A    KCE KLYDGC P++C  KC  KYP S+S+C+A PP PF Y+CYCF+
Subjt:  MTKFSFSLFFL-VLLFSVVLIVPQATHAVVVRKCEKKLYDGCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFF

A0A6J1EAA9 putative defensin-like protein 1293.4e-0540.24Show/hide
Query:  MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTK
        M KF   L FL+L+ SV L++P+A  A     C ++LY+ GC+   C  +C +KY  ST +C+  P  P   AC CFF   K
Subjt:  MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTK

A0A6J1JQS7 putative defensin-like protein 1299.9e-0539.02Show/hide
Query:  MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTK
        M KF   L FL+L+ S  L++P+A  A     C ++LY+ GC+   C  +C +KY  ST +C+  P  P   AC CFF   K
Subjt:  MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYD-GCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAGTTTTCTTTCTCCCTATTTTTCCTGGTTCTACTTTTCTCAGTTGTATTGATTGTACCTCAAGCAACCCATGCAGTGGTTGTAAGGAAATGTGAGAAGAAGTT
ATATGATGGATGCCAACCTGAAGAATGCCTACTTAAGTGTCTTCAGAAGTATCCTCAATCAACATCTCAATGCATTGCATTCCCTCCATTTCCCTTTACCTATGCTTGCT
ATTGCTTTTTTACTTCTACTAAAAGATGTCATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAAGTTTTCTTTCTCCCTATTTTTCCTGGTTCTACTTTTCTCAGTTGTATTGATTGTACCTCAAGCAACCCATGCAGTGGTTGTAAGGAAATGTGAGAAGAAGTT
ATATGATGGATGCCAACCTGAAGAATGCCTACTTAAGTGTCTTCAGAAGTATCCTCAATCAACATCTCAATGCATTGCATTCCCTCCATTTCCCTTTACCTATGCTTGCT
ATTGCTTTTTTACTTCTACTAAAAGATGTCATTTTTGA
Protein sequenceShow/hide protein sequence
MTKFSFSLFFLVLLFSVVLIVPQATHAVVVRKCEKKLYDGCQPEECLLKCLQKYPQSTSQCIAFPPFPFTYACYCFFTSTKRCHF