; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002856 (gene) of Chayote v1 genome

Gene IDSed0002856
OrganismSechium edule (Chayote v1)
DescriptionDRBM domain-containing protein
Genome locationLG08:27906078..27907232
RNA-Seq ExpressionSed0002856
SyntenySed0002856
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592994.1 hypothetical protein SDJN03_12470, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5758.59Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------
        MS   V PTEDAI TLLD LVEPMLPAK  S  NPPQSLLQ+VAKQVHAVVLLYN+YHRKQHPHL+FLSFE FCKLAVV+KP  +               
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------

Query:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                A++D++ E WPLSKVAVLLIDSK+E CHLLF   T        QDLDTSEC PE  DEEKH+NKKKR++KK SKEG
Subjt:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGVYLTSL
         V DE +TQQLAYS V+K TG+  T L
Subjt:  LVGDETRTQQLAYSAVKKVTGVYLTSL

KAG7013891.1 hypothetical protein SDJN02_24060, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-5857.21Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVA--------------
        MS + V PTEDAI  LLD LVEPMLP+K +S  NPP +LLQ+VAKQ+HAVVLLYN+YHRKQHPHLEFLSFE FCKLAVV+KP  ++              
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVA--------------

Query:  -------------------------TEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                 ++DEN E WPLSKVAV LIDSKKE CHLLF + T        Q+LDTSEC P++ +EEKH+NKKKR++KK SKEG
Subjt:  -------------------------TEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGVYLTSLTH
        LV   T+TQQLAYSAVK+ TG+Y T LTH
Subjt:  LVGDETRTQQLAYSAVKKVTGVYLTSLTH

KAG7025400.1 hypothetical protein SDJN02_11895 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-5758.59Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPG-----------------
        MS   V PTEDAI TLLD LVEPMLPAK  S  NPPQSLLQ+VAKQVHAVVLLYN+YHRKQHPHL+FLSFE FCKLAVV+KP                  
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPG-----------------

Query:  ----------------------FVATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                               +A++D++ E WPLSKVAVLLIDSK+E CHLLF   T        QDLDTSEC PE  DEEKH+NKKKR++KK SKEG
Subjt:  ----------------------FVATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGVYLTSL
         V DE +TQQLAYS V+K TG+  T L
Subjt:  LVGDETRTQQLAYSAVKKVTGVYLTSL

XP_022960330.1 uncharacterized protein LOC111461089 [Cucurbita moschata]5.3e-5859.03Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------
        MS + V PTEDAI TLLD LVEPMLPAK  S  NPPQSLLQ+VAKQVHAVVLLYN+YHRKQHPHLEFLSFE FCKLAVV+KP  +               
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------

Query:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                A++D++ E WPLSKVAVLLIDSK+E CHLLF   T        QDLDTSEC PE  DEEKH+NKKKR++KK SKEG
Subjt:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGVYLTSL
         V DE +TQQLAYS V+K TG+  T L
Subjt:  LVGDETRTQQLAYSAVKKVTGVYLTSL

XP_023004406.1 uncharacterized protein LOC111497732 [Cucurbita maxima]1.2e-5758.59Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------
        MS   V PTEDAI TLLD LVEPMLPAK  S  NPPQSLLQ+VAKQVHAVVLLYN+YHRKQHPHLEFLSFE+FCKLAVV+KP  +               
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------

Query:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                A++D++ E WPLSKVAVLLIDSK+E CHLLF   T        QDLDTSEC PE  DEEKH+NKKKR++KK SKEG
Subjt:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGVYLTSL
         V DE +TQQLAYS V+K TG+  + L
Subjt:  LVGDETRTQQLAYSAVKKVTGVYLTSL

TrEMBL top hitse value%identityAlignment
A0A6J1DAH9 uncharacterized protein LOC111018541 isoform X11.3e-5758.11Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------
        MS   V PTEDAI  LLD LVEPMLPAK +S  NPPQSL Q+VAKQVHAVV+LYN+YHRKQHPHLE LSFE FCKLAVV+KP  +               
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------

Query:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                A++DEN E WPLSKVAVLLIDS+KECCHLLF   T        QDLDTSEC PE  +EEKH+NKK+R++KK SKE 
Subjt:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGV
         V DE +TQQLAYSAVK+ TG+
Subjt:  LVGDETRTQQLAYSAVKKVTGV

A0A6J1HAN9 uncharacterized protein LOC1114610892.6e-5859.03Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------
        MS + V PTEDAI TLLD LVEPMLPAK  S  NPPQSLLQ+VAKQVHAVVLLYN+YHRKQHPHLEFLSFE FCKLAVV+KP  +               
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------

Query:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                A++D++ E WPLSKVAVLLIDSK+E CHLLF   T        QDLDTSEC PE  DEEKH+NKKKR++KK SKEG
Subjt:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGVYLTSL
         V DE +TQQLAYS V+K TG+  T L
Subjt:  LVGDETRTQQLAYSAVKKVTGVYLTSL

A0A6J1JP19 uncharacterized protein LOC111488583 isoform X27.0e-5656.76Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVA--------------
        MS + V PTEDAI  LLD LVEPMLP+K +S  NPP +LLQ+VAKQ+HAVVLLYN+YHRKQHPHLEFLSFE FCKLAVV+KP  ++              
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVA--------------

Query:  -------------------------TEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                 ++DEN E WPLSKVAV LIDSKKE CHLLF + T        Q+LDT EC P++ +EEKH+NKKKR++KK SKEG
Subjt:  -------------------------TEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGV
        LV  ET+TQQLAYSAVK+ TG+
Subjt:  LVGDETRTQQLAYSAVKKVTGV

A0A6J1JUZ0 uncharacterized protein LOC111488583 isoform X17.0e-5656.76Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVA--------------
        MS + V PTEDAI  LLD LVEPMLP+K +S  NPP +LLQ+VAKQ+HAVVLLYN+YHRKQHPHLEFLSFE FCKLAVV+KP  ++              
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVA--------------

Query:  -------------------------TEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                 ++DEN E WPLSKVAV LIDSKKE CHLLF + T        Q+LDT EC P++ +EEKH+NKKKR++KK SKEG
Subjt:  -------------------------TEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGV
        LV  ET+TQQLAYSAVK+ TG+
Subjt:  LVGDETRTQQLAYSAVKKVTGV

A0A6J1KZE5 uncharacterized protein LOC1114977325.8e-5858.59Show/hide
Query:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------
        MS   V PTEDAI TLLD LVEPMLPAK  S  NPPQSLLQ+VAKQVHAVVLLYN+YHRKQHPHLEFLSFE+FCKLAVV+KP  +               
Subjt:  MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFV---------------

Query:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG
                                A++D++ E WPLSKVAVLLIDSK+E CHLLF   T        QDLDTSEC PE  DEEKH+NKKKR++KK SKEG
Subjt:  ------------------------ATEDENFESWPLSKVAVLLIDSKKECCHLLFGATT--------QDLDTSECLPENSDEEKHINKKKRLVKKSSKEG

Query:  LVGDETRTQQLAYSAVKKVTGVYLTSL
         V DE +TQQLAYS V+K TG+  + L
Subjt:  LVGDETRTQQLAYSAVKKVTGVYLTSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05950.1 unknown protein1.5e-2638.73Show/hide
Query:  SDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVATEDEN------------
        +D  PTEDAI+ LL+ LV+P+LP+KPT    P  S+ ++VAKQVHAVVLLYN+YHRK +PHLE LSFE F  LA V+KP  +    E+            
Subjt:  SDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVATEDEN------------

Query:  --------------------FESWPLSKVAVLLIDSKKECCHLLFGATTQDLDTSECLPENSDEEKHINKKKRLVKKSSKEGLVGDETRTQQLAYSAVKK
                                P+ +VAVLL+DS+K+ C+L   + TQ +         S  EK I K+K   +   +EG+       Q++A++ VK+
Subjt:  --------------------FESWPLSKVAVLLIDSKKECCHLLFGATTQDLDTSECLPENSDEEKHINKKKRLVKKSSKEGLVGDETRTQQLAYSAVKK

Query:  VTGV
         TGV
Subjt:  VTGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATTCAGATGTACGCCCAACCGAGGATGCCATACAAACATTATTAGACCTTTTAGTCGAACCTATGCTTCCTGCAAAGCCAACTTCGAGTTGCAATCCACCACA
ATCTCTACTGCAAGCTGTTGCAAAACAGGTGCATGCTGTTGTTTTATTGTACAACCACTACCACCGGAAACAACATCCACACCTTGAATTTCTGAGTTTTGAGAAATTCT
GCAAGTTAGCTGTGGTCATTAAACCAGGCTTTGTCGCAACAGAAGATGAAAACTTTGAGAGCTGGCCGCTTTCCAAGGTTGCTGTTCTTTTAATTGACTCCAAGAAGGAA
TGTTGCCATTTGCTATTTGGTGCCACTACTCAAGATTTAGATACCTCTGAATGTCTACCAGAAAATTCGGATGAAGAAAAACATATAAACAAAAAGAAAAGATTGGTTAA
GAAATCTTCAAAAGAGGGGCTGGTTGGGGATGAAACTAGGACTCAACAACTTGCATATTCAGCAGTTAAAAAAGTTACTGGTGTGTACCTTACTTCATTAACGCATCATA
GTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATTCAGATGTACGCCCAACCGAGGATGCCATACAAACATTATTAGACCTTTTAGTCGAACCTATGCTTCCTGCAAAGCCAACTTCGAGTTGCAATCCACCACA
ATCTCTACTGCAAGCTGTTGCAAAACAGGTGCATGCTGTTGTTTTATTGTACAACCACTACCACCGGAAACAACATCCACACCTTGAATTTCTGAGTTTTGAGAAATTCT
GCAAGTTAGCTGTGGTCATTAAACCAGGCTTTGTCGCAACAGAAGATGAAAACTTTGAGAGCTGGCCGCTTTCCAAGGTTGCTGTTCTTTTAATTGACTCCAAGAAGGAA
TGTTGCCATTTGCTATTTGGTGCCACTACTCAAGATTTAGATACCTCTGAATGTCTACCAGAAAATTCGGATGAAGAAAAACATATAAACAAAAAGAAAAGATTGGTTAA
GAAATCTTCAAAAGAGGGGCTGGTTGGGGATGAAACTAGGACTCAACAACTTGCATATTCAGCAGTTAAAAAAGTTACTGGTGTGTACCTTACTTCATTAACGCATCATA
GTTGAATTTCAATAGTTATATTTTGTTCTTGTACTAAAAAAGTTTAAGTATCACTATTTGATCTTATTGTCAATATGGTTGTATCTTGGTTGAAATGTTCTCCTATATTT
TTCGATTATCGTTACTGTTCTCTCCTTTCGAAT
Protein sequenceShow/hide protein sequence
MSDSDVRPTEDAIQTLLDLLVEPMLPAKPTSSCNPPQSLLQAVAKQVHAVVLLYNHYHRKQHPHLEFLSFEKFCKLAVVIKPGFVATEDENFESWPLSKVAVLLIDSKKE
CCHLLFGATTQDLDTSECLPENSDEEKHINKKKRLVKKSSKEGLVGDETRTQQLAYSAVKKVTGVYLTSLTHHS