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Sed0002860 (gene) of Chayote v1 genome

Gene IDSed0002860
OrganismSechium edule (Chayote v1)
DescriptionDUF1279 domain-containing protein
Genome locationLG06:33903151..33905787
RNA-Seq ExpressionSed0002860
SyntenySed0002860
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009688 - Protein FAM210A/B-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604946.1 hypothetical protein SDJN03_02263, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2583.78Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
        M FF+GGGRFRELLRKY KVAIGVHFSVSA SITGLYVAIKNN+DVE L +KLHMDGFSSKD PQTSPSE  S+
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
XP_022146083.1 uncharacterized protein LOC111015379 [Momordica charantia]3.9e-2685.33Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISAA
        M FF+GGGRFRELLRKY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGFSSKDQPQT PSE+ S+A
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISAA
XP_022947464.1 uncharacterized protein LOC111451320 [Cucurbita moschata]1.5e-2585.14Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
        M FF+GGGRFRELLRKY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGFSSKD PQTSPSE  S+
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
XP_022986110.1 uncharacterized protein LOC111483951 [Cucurbita maxima]3.3e-2583.78Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
        M FF+GGGRFRELL+KY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGFSSKDQ QTSP ET S+
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
XP_038902628.1 uncharacterized protein LOC120089278 [Benincasa hispida]3.3e-2583.78Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
        M FF+GGGRFRELLRKY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGF SKDQPQT+PSE  S+
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
TrEMBL top hitse value%identityAlignment
A0A6J1CXM4 uncharacterized protein LOC1110153791.9e-2685.33Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISAA
        M FF+GGGRFRELLRKY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGFSSKDQPQT PSE+ S+A
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISAA
A0A6J1FU56 uncharacterized protein LOC1114484545.1e-2484.29Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSE
        M FF+GGGRFRELL+KY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGFSSKDQ QTSP +
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSE
A0A6J1G6W3 uncharacterized protein LOC1114513207.2e-2685.14Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
        M FF+GGGRFRELLRKY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGFSSKD PQTSPSE  S+
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
A0A6J1I2F7 uncharacterized protein LOC1114698882.1e-2588.57Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSE
        M FF+GGGRFRELLRKY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGFSSKD PQTSPSE
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSE
A0A6J1JD52 uncharacterized protein LOC1114839511.6e-2583.78Show/hide
Query:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
        M FF+GGGRFRELL+KY KVAIGVHFSVSA SITGLYVAIKNNVDVE L +KLHMDGFSSKDQ QTSP ET S+
Subjt:  MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20940.1 Protein of unknown function (DUF1279)1.6e-1461.02Show/hide
Query:  RFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTS
        R +E+++KY KVA+GVHFSVS  SI+G Y+AIKNNVDVE L EK  +  FSSK+ P  S
Subjt:  RFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCTTCTCCGGCGGTGGCCGATTCCGCGAGCTTCTCAGGAAGTACGACAAGGTAGCAATCGGAGTTCATTTCTCAGTCTCGGCGACTTCGATCACCGGCCTCTA
CGTCGCAATCAAGAACAATGTCGATGTTGAATTGCTTCCCGAGAAGCTCCACATGGATGGATTCTCCTCCAAAGATCAGCCGCAGACGAGTCCTTCTGAAACCATATCAG
CCGCAGGCGGTCGGTGA
mRNA sequenceShow/hide mRNA sequence
ACGCGTCTCAACGGCTATATTCTTGACACATGTTCATTATAAATAGCAGCTGTGTTCCCATCTCCAAAACCCTAATCAAATTTCAATTTCAACAAATCCAAACCACAAAA
AAGCCCTAAAATCAAAATCATTTTCAATTGTAGTTGCTTCGAAACCCTAGCCGTCGCCCTGCACCGCCAAGTTTCCGACTCGCCGCCTCTCTTTCATCCATGACTTTCTT
CTCCGGCGGTGGCCGATTCCGCGAGCTTCTCAGGAAGTACGACAAGGTAGCAATCGGAGTTCATTTCTCAGTCTCGGCGACTTCGATCACCGGCCTCTACGTCGCAATCA
AGAACAATGTCGATGTTGAATTGCTTCCCGAGAAGCTCCACATGGATGGATTCTCCTCCAAAGATCAGCCGCAGACGAGTCCTTCTGAAACCATATCAGCCGCAGGCGGT
CGGTGAAATTGCAGTTCATCGGAGACTACTACGTGTAATCGACCATTCCGAGCAAGGATCTGCGTAATCGAAGTGCAGTGTTGTCAGATTAACACAGACTGCTGCTCTGC
TCTGATAGGGTTTGGAACACAAGCTTGCATGTAGCTCAACTGTTTGCTTGAACAGTGATTAGGATTCTAGCACTCTGACTAATTTGTTCAACACTTAACAAAAAATTTCT
ACCTAAATTTTGACTACTCCCTCTCTAGGTTAAATCAATTGTAGTGGAAGAGAGATGTTTAAATTATTTTTAAAAGAAATTCAACCTTATTTAATTCATAGTTTACGAAT
TGGAACATCTTATTTTACTCTTTGTATCACAAAATTTTAGGGTGATTTTAGGAAATTGATTACCCGGAAAATCGATTTTCTTTGTAGTGCACCCTAAAATATTGGATATA
AAAGAGTAAAAAGATTGTATCTAAAAGTAAATCCTAGATATCAATTTTCTTGTATAATTTCTGTCATGAACACCTTCTCTTCGGTTTTTTCTGTGTTGATTGATCTTATT
TGTTATCTCCTAAATTATGTCTATGTAATTGACTGCTTTTTTCATGCCTAAATTAGTCTTTTTACTGCTACTATTTTATATTTTTGCCCTAACCCTTTTTCATATGTTCA
ATTTTGGGAACCCTATCGAGCGTCGGACGCGTGAGGTTGCTATTTCTCATTCTTGGTTTCTGGTATATTCTTTTTAATATGTTCAATGCTTGATTTATGATTTAGGCAAT
TCCATCATTCATGGTCAGTATTTTTTTGAAACAAATTTTGTAGGGAATAATAACTTTTAGTTCTTTATTTGCGATTTTGTTTTAGTTTTATCTCTGTTTTATAATTGACT
CTATTAGGATGGATGTTAGTGGCCTCTCTTCAATACTTAGATTTTCAAGCTTCAATAATTGTCTCTTAGTCCATTCATCAACGCACTATAAGTTCTTACTTCTCCTTCTT
TTTTGATCTTTCAATCCGTTCCAACTTCAAACAACTGATCTCATTTTGCTTTTCACATATTATACATGAAACGACTAGCAAAATATTTGATCTTTCAATGTGTTCTAACT
TCAAACAATACCTACTGATCTTATTTTGCTTTTCACAAAGTGTACATGAAACAACTATCAAACTAATCAGTAGACTAAGAAGAATTATAATATAAAGCAACTTGCTTGGA
GTTCCAAAGATGGCGAGGTTTCTTTCCTTTCATTCCCTTACCTTTACTTTCTATTCATGTATGCTCTTCTTTATTTTCCTTACTGTTTTTTATTTTCTGAAAGAATAAAC
AATTCATTCATTAAGAAAATGAATTAGTACAGAGTACAAGGAAACGAAGAGAAAAACAGAGAAAAGCTAGTACAAGAAACCAAACATATTAGCATAACAAAACAGAGTGA
TAAAAAGCAGAACAGTGGTGACTAGAAGAATGCAGCGCAGTTGGAGACGATTTGATTAATGGAGTAACTTTCAAAAGCTTTTGAAGAGGCCACCCAAAGTGAAGCTTGAG
GTCTAGCTGATTCACTTCTTGAGCGCCAAGGACGAGAGGAATCCTTAAATATGGGTTGATTTCTTTATATAAAAGACTTTTGACTTCACTAATCCAAAGAGAATGAGTGT
TGTTTCGAAACAAGTGCCCAACAAAAGGTGCTGAACATTTTGTTTAGCATAGTTGGAGAAGATCCAAGATAAATGAAATAAGGCCAGAAGATCCTCTCAGCAGAGAGCTG
CAAACTTGCAAGTGAATAAAATGGGGTTGCAATTTTCAGGGGCTGAGGAAACAAAAGTGACAGAATGATGGTTGAAGGCATTGTTGTGGCAATTTTCTTTGAAGGAACTC
TGAAGAATTCAGCCTACCATGAAACAGAATCCCAGGAAAAACATTGCTTTTTTCTTTATTGAAATGTGGAAATTAGATTTGCTAAATTTTCAAAACATGAACAATTTTGT
AATTTTTTTCTTTATTTAGCTCACTCTCGTCAAAAGCTCATCTAATTTTGGTCTCTCGAATTTGATGTTTACCAAATTTCGGTCCCTCAACTTTTAAATGGCCA
Protein sequenceShow/hide protein sequence
MTFFSGGGRFRELLRKYDKVAIGVHFSVSATSITGLYVAIKNNVDVELLPEKLHMDGFSSKDQPQTSPSETISAAGGR