; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002888 (gene) of Chayote v1 genome

Gene IDSed0002888
OrganismSechium edule (Chayote v1)
Descriptionprotein RALF-like 32
Genome locationLG02:48213937..48217052
RNA-Seq ExpressionSed0002888
SyntenySed0002888
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067637.1 protein RALF-like 32 [Cucumis melo var. makuwa]9.8e-2360Show/hide
Query:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKS
        MRRRISSKP+SLQP FL LLL  L  L LL+  L L+RA+ST  CN SI E   E E LMES+I+RRFL QQKKYIS              +G +PYTKS
Subjt:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKS

Query:  GSCTPPSANTYNRVCSKTYRCRSDD
        GSC PP AN Y+R C K YRCRSDD
Subjt:  GSCTPPSANTYNRVCSKTYRCRSDD

KAE8650417.1 hypothetical protein Csa_010756 [Cucumis sativus]7.3e-1860.87Show/hide
Query:  LHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKSGSCTPPSANTYNRVCSKTYRCRSDD
        L L+RA+ST  CN SI E   E E LMES+I RRFLEQQKKYIS              +G QPYT+SGSC PP AN YNR CSK YRCRSDD
Subjt:  LHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKSGSCTPPSANTYNRVCSKTYRCRSDD

XP_004147646.3 protein RALF-like 32 [Cucumis sativus]1.3e-2258.87Show/hide
Query:  RRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKSG
        R+RISSKP+SLQ  FL LL  FL     L   L L+RA+ST  CN SI E   E E LMES+I RRFLEQQKKYIS              +G QPYT+SG
Subjt:  RRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKSG

Query:  SCTPPSANTYNRVCSKTYRCRSDD
        SC PP AN YNR CSK YRCRSDD
Subjt:  SCTPPSANTYNRVCSKTYRCRSDD

XP_022138047.1 protein RALF-like 32 [Momordica charantia]2.6e-2359.2Show/hide
Query:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKS
        MRRR+SSKP   QPFFL LLLF LQ        L LLRA+   PCN SI E + E E LMES+I+RRFLEQQKKYIS G               QPYTKS
Subjt:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKS

Query:  GSCTPPSANTYNRVCSKTYRCRSDD
        GSC PP +N Y+R CSK YRCRSDD
Subjt:  GSCTPPSANTYNRVCSKTYRCRSDD

XP_038900965.1 protein RALF-like 32 [Benincasa hispida]5.4e-2157.6Show/hide
Query:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKS
        MRRRISSKPI LQ  FL L LF      LL   L L+RA S   CN SI E   E E LMES+I+RRFLEQ KKYIS G               QPYTKS
Subjt:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKS

Query:  GSCTPPSANTYNRVCSKTYRCRSDD
        GSC PP  N Y R CSK YRCRSDD
Subjt:  GSCTPPSANTYNRVCSKTYRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L9A8 Uncharacterized protein3.1e-2258.06Show/hide
Query:  RRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKSG
        R+RISSKP+SLQ  FL LL  FL     L   L L+RA+ST  CN SI     E E LMES+I RRFLEQQKKYIS              +G QPYT+SG
Subjt:  RRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKSG

Query:  SCTPPSANTYNRVCSKTYRCRSDD
        SC PP AN YNR CSK YRCRSDD
Subjt:  SCTPPSANTYNRVCSKTYRCRSDD

A0A5A7VKE5 Protein RALF-like 324.7e-2360Show/hide
Query:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKS
        MRRRISSKP+SLQP FL LLL  L  L LL+  L L+RA+ST  CN SI E   E E LMES+I+RRFL QQKKYIS              +G +PYTKS
Subjt:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYIS--------------TGRQPYTKS

Query:  GSCTPPSANTYNRVCSKTYRCRSDD
        GSC PP AN Y+R C K YRCRSDD
Subjt:  GSCTPPSANTYNRVCSKTYRCRSDD

A0A650EQP6 Rapid alkalinization factor 182.9e-1254.76Show/hide
Query:  STIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKSGSCTPPSANTYNRVCSKTYRCRSD
        S+ PCN+SIVE D E E LMES+I+RRFL Q KKYIS G               + Y+K+G C PP +N YNR CSK YRCRSD
Subjt:  STIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKSGSCTPPSANTYNRVCSKTYRCRSD

A0A6J1C9Y4 protein RALF-like 321.2e-2359.2Show/hide
Query:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKS
        MRRR+SSKP   QPFFL LLLF LQ        L LLRA+   PCN SI E + E E LMES+I+RRFLEQQKKYIS G               QPYTKS
Subjt:  MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKS

Query:  GSCTPPSANTYNRVCSKTYRCRSDD
        GSC PP +N Y+R CSK YRCRSDD
Subjt:  GSCTPPSANTYNRVCSKTYRCRSDD

A0A6J1GXB3 protein RALF-like 323.0e-1756.07Show/hide
Query:  LLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKSGSCTPPSANTYNRVCSKT
        L L  +QD       L L+RA+S   CN SI E   E ETLMES+I+RRFL QQKKYIS G               QPYTKSGSC PP AN YNR CSK 
Subjt:  LLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGR--------------QPYTKSGSCTPPSANTYNRVCSKT

Query:  YRCRSDD
        YRCRSDD
Subjt:  YRCRSDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAAGAATCTCAAGCAAGCCAATTTCTTTACAACCATTTTTTCTTCATCTCCTTCTCTTTTTCCTCCAAGATCTTCATCTCCTTGAGCTATATCTTCATCTCCT
TCGAGCTACGTCGACGATCCCTTGCAACAACTCCATAGTCGAGGGTGATAGGGAGGTGGAGACGCTAATGGAGTCCAAGATAAATCGAAGGTTTCTTGAACAACAAAAGA
AATACATCTCCACTGGACGCCAACCTTACACCAAAAGTGGAAGCTGTACTCCGCCATCGGCAAATACTTACAATCGAGTTTGCTCTAAAACATATCGATGTAGGTCTGAT
GATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAAGAATCTCAAGCAAGCCAATTTCTTTACAACCATTTTTTCTTCATCTCCTTCTCTTTTTCCTCCAAGATCTTCATCTCCTTGAGCTATATCTTCATCTCCT
TCGAGCTACGTCGACGATCCCTTGCAACAACTCCATAGTCGAGGGTGATAGGGAGGTGGAGACGCTAATGGAGTCCAAGATAAATCGAAGGTTTCTTGAACAACAAAAGA
AATACATCTCCACTGGACGCCAACCTTACACCAAAAGTGGAAGCTGTACTCCGCCATCGGCAAATACTTACAATCGAGTTTGCTCTAAAACATATCGATGTAGGTCTGAT
GATTGA
Protein sequenceShow/hide protein sequence
MRRRISSKPISLQPFFLHLLLFFLQDLHLLELYLHLLRATSTIPCNNSIVEGDREVETLMESKINRRFLEQQKKYISTGRQPYTKSGSCTPPSANTYNRVCSKTYRCRSD
D