; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002902 (gene) of Chayote v1 genome

Gene IDSed0002902
OrganismSechium edule (Chayote v1)
Descriptionauxin-regulated gene involved in organ size
Genome locationLG03:15847269..15847789
RNA-Seq ExpressionSed0002902
SyntenySed0002902
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025988.1 hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa]1.1e-0875Show/hide
Query:  MLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH
        ML+V+AV LL+ PLVLPPLPPPP LLLF+PVLIMS L+FLALSPS+ P E H
Subjt:  MLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH

KAG5242543.1 hypothetical protein IMY05_006G0027200 [Salix suchowensis]2.8e-0765.45Show/hide
Query:  FSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP
        FS RSV  L+ +AV+L++ PL+LPPLPPPP++L+F+PVLIMSFLV LA S SQ+P
Subjt:  FSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP

KAG6603314.1 hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1476.92Show/hide
Query:  AFFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDHLVAA
        AFFS RSVAML+VVA  LL+ PLVLPPLPPPP LLLF+PVLIM FL+FLALSPS+VP E+H V A
Subjt:  AFFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDHLVAA

KAG8648991.1 hypothetical protein MANES_08G058601v8 [Manihot esculenta]1.3e-0763.33Show/hide
Query:  FSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDHL
        FS RS+ +++V    LLV PLVLPPLPPPP  LLF+PVLIMS L+FLAL+PS VP  D +
Subjt:  FSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDHL

TYK04223.1 hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa]1.1e-0875Show/hide
Query:  MLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH
        ML+V+AV LL+ PLVLPPLPPPP LLLF+PVLIMS L+FLALSPS+ P E H
Subjt:  MLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH

TrEMBL top hitse value%identityAlignment
A0A0A0L0Y7 Uncharacterized protein9.8e-1480Show/hide
Query:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH
        FFS RSVAML+VVAV LL+ PLVLPPLPPPP LLLF+PVLIMS L+FLALSPS+VP E+H
Subjt:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH

A0A2N9F7M5 Uncharacterized protein1.4e-0765.45Show/hide
Query:  FSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP
        ++ R + +++++ V LLV PLVLPPLPPPP LLLF+PVL+MS LVFLAL+PSQVP
Subjt:  FSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP

A0A5A7SII5 Uncharacterized protein5.5e-0975Show/hide
Query:  MLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH
        ML+V+AV LL+ PLVLPPLPPPP LLLF+PVLIMS L+FLALSPS+ P E H
Subjt:  MLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH

A0A5B7AL58 Uncharacterized protein (Fragment)1.0e-0764.29Show/hide
Query:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP
        FFS R+V +++V+ V LLV P+VLPPLPPPP +LLFIP+LIM+ L+ LA SPSQ+P
Subjt:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP

A0A5D3BWW3 Uncharacterized protein5.5e-0975Show/hide
Query:  MLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH
        ML+V+AV LL+ PLVLPPLPPPP LLLF+PVLIMS L+FLALSPS+ P E H
Subjt:  MLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDH

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.3e-0450.94Show/hide
Query:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS
        +FS  S+ +L+ +   LL+ PLVLPPLPPPP +LL +P+ IM  L+ LA  PS
Subjt:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE3.0e-0452.83Show/hide
Query:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS
        +FS  S+ +L+ +   LL+ PLVLPPLPPPP +LL +P+ IM  LV LA  PS
Subjt:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS

Q8RWS1 Protein ORGAN SIZE RELATED 11.1e-0657.69Show/hide
Query:  RSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP
        RSVA+L+ ++++LL+ P  LPPLPPPPA LL +P+L+M  L+FLA SPS  P
Subjt:  RSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP

Q8RXL7 ARGOS-like protein4.0e-0450Show/hide
Query:  AFFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS
        ++FS  S+ +L+ +   LL+ PL+LPPLPPPP +LL IP+ IM  L+ LA  PS
Subjt:  AFFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS

Arabidopsis top hitse value%identityAlignment
AT2G41230.1 unknown protein7.9e-0857.69Show/hide
Query:  RSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP
        RSVA+L+ ++++LL+ P  LPPLPPPPA LL +P+L+M  L+FLA SPS  P
Subjt:  RSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVP

AT2G44080.1 ARGOS-like2.8e-0550Show/hide
Query:  AFFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS
        ++FS  S+ +L+ +   LL+ PL+LPPLPPPP +LL IP+ IM  L+ LA  PS
Subjt:  AFFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS

AT3G59900.1 auxin-regulated gene involved in organ size2.2e-0552.83Show/hide
Query:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS
        +FS  S+ +L+ +   LL+ PLVLPPLPPPP +LL +P+ IM  LV LA  PS
Subjt:  FFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTTTTAGCTTCAGATCGGTGGCAATGTTGATGGTTGTGGCGGTGGTTCTTTTGGTATCGCCGCTTGTGCTGCCGCCGTTGCCGCCGCCGCCGGCGCTACTCTT
GTTTATTCCGGTGCTGATTATGTCGTTTCTTGTGTTCTTGGCCCTGTCGCCGTCGCAGGTTCCGCCGGAGGACCACCTTGTCGCCGCTGCCGACGATTCGGCGTAA
mRNA sequenceShow/hide mRNA sequence
CCCACCACTCTCTCTCTCTCTCTCTCCTCACTTTCTCTCTCTTGACCGTAAAATCAAAACCTGCCCTTAAAAAAAAATTGTTTTTTTTTTTTTGTGGGTGTTTTGTTGGG
GATTTAAAGTCGACGACTTTACCTACGATATGCAATTGGGCGACGTCAAAATTGAGCTTGCGGCGGCGGTGACGGCGGCGGAGTTTTGTGGTGATGGCGTTTTTTAGCTT
CAGATCGGTGGCAATGTTGATGGTTGTGGCGGTGGTTCTTTTGGTATCGCCGCTTGTGCTGCCGCCGTTGCCGCCGCCGCCGGCGCTACTCTTGTTTATTCCGGTGCTGA
TTATGTCGTTTCTTGTGTTCTTGGCCCTGTCGCCGTCGCAGGTTCCGCCGGAGGACCACCTTGTCGCCGCTGCCGACGATTCGGCGTAATTTTTTTCTTCTTCTCTTTGT
TCAATGTATCATGGAAATTTTTGTAGTGTAGTTAATATTTTTCGGTTGGTAATAATCAATTTGTTTTTTTTTCATCATGAA
Protein sequenceShow/hide protein sequence
MAFFSFRSVAMLMVVAVVLLVSPLVLPPLPPPPALLLFIPVLIMSFLVFLALSPSQVPPEDHLVAAADDSA